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PCC-BIBFRAME-Exchange-02021-September-9
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{ | |
"cells": [ | |
{ | |
"cell_type": "code", | |
"execution_count": 2, | |
"metadata": {}, | |
"outputs": [], | |
"source": [ | |
"import rdflib\n", | |
"import pyshacl\n", | |
"import kglab" | |
] | |
}, | |
{ | |
"cell_type": "markdown", | |
"metadata": {}, | |
"source": [ | |
"# PCC BIBFRAME Exchange\n", | |
"## Interchange Challenges\n", | |
"As a developer and a tech lead on the [Sinopia](https://sinopia.io) Linked Data Editor, we experience interchange challenges when trying to import external RDF. This notebook can be run by clicking on [![Binder](https://mybinder.org/badge_logo.svg)](https://mybinder.org/v2/gist/jermnelson/c430eb37133170e84f3c22734c52702c/HEAD).\n", | |
"\n", | |
"The following are examples using the [BIBFRAME Title](https://id.loc.gov/ontologies/bibframe.html#c_Title) class (inspired by Nancy Lorimer's comments):" | |
] | |
}, | |
{ | |
"cell_type": "markdown", | |
"metadata": {}, | |
"source": [ | |
"### ShareVDE\n", | |
"Searching the Stanford's ShareVDE Cache for Octavia Butler's *Parable of the Sower* from Questioning Authority API [query]('https://lookup.ld4l.org/authorities/fetch/linked_data/sharevde_stanford_ld4l_cache?format=n3&uri=http://share-vde.org/sharevde/rdfBibframe/Work/7985783') returns the following RDF related to the Work's title:" | |
] | |
}, | |
{ | |
"cell_type": "code", | |
"execution_count": 3, | |
"metadata": {}, | |
"outputs": [], | |
"source": [ | |
"sharevde_title_rdf = \"\"\"@prefix bf2: <http://id.loc.gov/ontologies/bibframe/> .\n", | |
"@prefix marcrelators: <http://id.loc.gov/vocabulary/relators/> .\n", | |
"@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .\n", | |
"\n", | |
"<http://share-vde.org/sharevde/rdfBibframe/Work/7985783-1> a bf2:Text,\n", | |
" bf2:Work ;\n", | |
" bf2:title <http://share-vde.org/sharevde/rdfBibframe/Title_996/0409b9ef-0416-3b57-8826-259ebc9fdb53> .\n", | |
" \n", | |
"<http://share-vde.org/sharevde/rdfBibframe/Title_996/0409b9ef-0416-3b57-8826-259ebc9fdb53> rdfs:label \" Parable of the sower\" .\n", | |
"\"\"\"" | |
] | |
}, | |
{ | |
"cell_type": "markdown", | |
"metadata": {}, | |
"source": [ | |
"### Library of Congress\n", | |
"Searching [id.loc.gov](https://id.loc.gov/resources/works.html) BIBFRAME Work's endpont for *Parable of the Sower*, we'll use this [BIBFRAME Work](https://id.loc.gov/resources/works/21223749.html)'s RDF with the following related to the Work's title:" | |
] | |
}, | |
{ | |
"cell_type": "code", | |
"execution_count": 4, | |
"metadata": {}, | |
"outputs": [], | |
"source": [ | |
"loc_title_rdf = \"\"\"@prefix bf: <http://id.loc.gov/ontologies/bibframe/> .\n", | |
"@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .\n", | |
"\n", | |
"<http://id.loc.gov/resources/works/21223749> a bf:Text,\n", | |
" bf:Work ;\n", | |
" bf:title [ a bf:Title ;\n", | |
" rdfs:label \"Parable of the sower\" ;\n", | |
" bf:mainTitle \"Parable of the sower\" ] .\n", | |
"\"\"\"" | |
] | |
}, | |
{ | |
"cell_type": "markdown", | |
"metadata": {}, | |
"source": [ | |
"### Sinopia\n", | |
"Finally, using the [pcc:bf2:Monograph:Work](https://api.stage.sinopia.io/resource/pcc:bf2:Monograph:Work) template, created the same title-related RDF as http://id.loc.gov/resources/works/21223749:\n", | |
"\n", | |
"![Sinopia Title Screenshot](sinopia-title-screenshot.png)" | |
] | |
}, | |
{ | |
"cell_type": "code", | |
"execution_count": 5, | |
"metadata": {}, | |
"outputs": [], | |
"source": [ | |
"sinopia_title_rdf = \"\"\"@prefix bf: <http://id.loc.gov/ontologies/bibframe/> .\n", | |
"@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .\n", | |
"\n", | |
"<https://api.stage.sinopia.io/resource/addeddfb-d87a-4e67-bcd3-c1e5a8df4e7c> a bf:Text,\n", | |
" bf:Work ;\n", | |
" bf:title [ a bf:Title ;\n", | |
" rdfs:label \"Parable of the Sower\"@eng;\n", | |
" bf:mainTitle \"Parable of the Sower\"@eng ] .\n", | |
"\"\"\"" | |
] | |
}, | |
{ | |
"cell_type": "markdown", | |
"metadata": {}, | |
"source": [ | |
"## Comparing RDF\n", | |
"Creating three variables for the BIBFRAME Works and then parsing the RDF into three graphs; we get the following statistics:" | |
] | |
}, | |
{ | |
"cell_type": "code", | |
"execution_count": 6, | |
"metadata": {}, | |
"outputs": [], | |
"source": [ | |
"BF = rdflib.Namespace(\"http://id.loc.gov/ontologies/bibframe/\")\n", | |
"namespaces = { \"bf\": BF }\n", | |
"\n", | |
"sharevde_work_uri = rdflib.URIRef('http://share-vde.org/sharevde/rdfBibframe/Work/7985783-1')\n", | |
"loc_work_uri = rdflib.URIRef('http://id.loc.gov/resources/works/21223749')\n", | |
"sinopia_work_uri = rdflib.URIRef('https://api.stage.sinopia.io/resource/addeddfb-d87a-4e67-bcd3-c1e5a8df4e7c')\n", | |
"\n", | |
"\n", | |
"def build_graph(rdf: str) -> rdflib.Graph():\n", | |
" graph = rdflib.Graph()\n", | |
" for prefix, url in namespaces.items():\n", | |
" graph.namespace_manager.bind(prefix, url)\n", | |
" graph.parse(data=rdf, format='turtle')\n", | |
" return graph\n", | |
"\n", | |
"sharevde_graph = build_graph(sharevde_title_rdf)\n", | |
"loc_graph = build_graph(loc_title_rdf)\n", | |
"sinopia_graph = build_graph(sinopia_title_rdf)" | |
] | |
}, | |
{ | |
"cell_type": "markdown", | |
"metadata": {}, | |
"source": [ | |
"### Total Triples" | |
] | |
}, | |
{ | |
"cell_type": "code", | |
"execution_count": 7, | |
"metadata": {}, | |
"outputs": [ | |
{ | |
"name": "stdout", | |
"output_type": "stream", | |
"text": [ | |
"sharevde_title: 4\n", | |
"loc_title: 6\n", | |
"sinopia_title: 6\n" | |
] | |
} | |
], | |
"source": [ | |
"print(f\"\"\"sharevde_title: {len(sharevde_graph)}\n", | |
"loc_title: {len(loc_graph)}\n", | |
"sinopia_title: {len(sinopia_graph)}\"\"\")" | |
] | |
}, | |
{ | |
"cell_type": "markdown", | |
"metadata": {}, | |
"source": [ | |
"### Work Classes (bf:Work, bf:Text)\n", | |
"Confirms that all three bf:Works share the same `rdf:type`" | |
] | |
}, | |
{ | |
"cell_type": "code", | |
"execution_count": 8, | |
"metadata": {}, | |
"outputs": [ | |
{ | |
"data": { | |
"text/plain": [ | |
"[rdflib.term.URIRef('http://id.loc.gov/ontologies/bibframe/Text'),\n", | |
" rdflib.term.URIRef('http://id.loc.gov/ontologies/bibframe/Work')]" | |
] | |
}, | |
"execution_count": 8, | |
"metadata": {}, | |
"output_type": "execute_result" | |
} | |
], | |
"source": [ | |
"[obj for obj in sharevde_graph.objects(subject=sharevde_work_uri, predicate=rdflib.RDF.type)]" | |
] | |
}, | |
{ | |
"cell_type": "code", | |
"execution_count": 9, | |
"metadata": {}, | |
"outputs": [ | |
{ | |
"data": { | |
"text/plain": [ | |
"True" | |
] | |
}, | |
"execution_count": 9, | |
"metadata": {}, | |
"output_type": "execute_result" | |
} | |
], | |
"source": [ | |
"[obj for obj in sharevde_graph.objects(subject=sharevde_work_uri, predicate=rdflib.RDF.type)] == \\\n", | |
"[obj for obj in loc_graph.objects(subject=loc_work_uri, predicate=rdflib.RDF.type)] == \\\n", | |
"[obj for obj in sinopia_graph.objects(subject=sinopia_work_uri, predicate=rdflib.RDF.type)]" | |
] | |
}, | |
{ | |
"cell_type": "code", | |
"execution_count": 10, | |
"metadata": {}, | |
"outputs": [], | |
"source": [ | |
"sharevde_title = sharevde_graph.value(subject=sharevde_work_uri, predicate=BF.title)\n", | |
"loc_title = loc_graph.value(subject=loc_work_uri, predicate=BF.title)\n", | |
"sinopia_title = sinopia_graph.value(subject=sinopia_work_uri, predicate=BF.title)" | |
] | |
}, | |
{ | |
"cell_type": "code", | |
"execution_count": 11, | |
"metadata": {}, | |
"outputs": [ | |
{ | |
"name": "stdout", | |
"output_type": "stream", | |
"text": [ | |
"<class 'rdflib.term.URIRef'> <class 'rdflib.term.BNode'> <class 'rdflib.term.BNode'>\n" | |
] | |
} | |
], | |
"source": [ | |
"print(type(sharevde_title), type(loc_title), type(sinopia_title))" | |
] | |
}, | |
{ | |
"cell_type": "code", | |
"execution_count": 12, | |
"metadata": {}, | |
"outputs": [], | |
"source": [ | |
"sharevde_title_label = sharevde_graph.value(subject=sharevde_title, predicate=rdflib.RDFS.label)\n", | |
"loc_title_label = loc_graph.value(subject=loc_title, predicate=rdflib.RDFS.label)\n", | |
"sinopia_title_label = sinopia_graph.value(subject=sinopia_title, predicate=rdflib.RDFS.label)" | |
] | |
}, | |
{ | |
"cell_type": "code", | |
"execution_count": 13, | |
"metadata": {}, | |
"outputs": [ | |
{ | |
"name": "stdout", | |
"output_type": "stream", | |
"text": [ | |
"Labels\n", | |
" Share VDE: Parable of the sower\n", | |
" Library of Congress: Parable of the sower\n", | |
" Sinopia: Parable of the Sower\n" | |
] | |
} | |
], | |
"source": [ | |
"print(f\"\"\"Labels\n", | |
" Share VDE: {sharevde_title_label}\n", | |
" Library of Congress: {loc_title_label}\n", | |
" Sinopia: {sinopia_title_label}\"\"\")" | |
] | |
}, | |
{ | |
"cell_type": "code", | |
"execution_count": 14, | |
"metadata": {}, | |
"outputs": [ | |
{ | |
"name": "stdout", | |
"output_type": "stream", | |
"text": [ | |
"Compare:\n", | |
" ShareVDE vs LOC labels: False\n", | |
" LOC vs Sinopia labels: False\n", | |
" Sinopia vs ShareVDE: False\n" | |
] | |
} | |
], | |
"source": [ | |
"print(f\"\"\"Compare:\n", | |
" ShareVDE vs LOC labels: {sharevde_title_label == loc_title_label}\n", | |
" LOC vs Sinopia labels: {loc_title_label == sinopia_title_label}\n", | |
" Sinopia vs ShareVDE: {sinopia_title_label == sharevde_title_label}\"\"\")" | |
] | |
}, | |
{ | |
"cell_type": "code", | |
"execution_count": 15, | |
"metadata": {}, | |
"outputs": [ | |
{ | |
"data": { | |
"text/plain": [ | |
"rdflib.term.Literal(' Parable of the sower')" | |
] | |
}, | |
"execution_count": 15, | |
"metadata": {}, | |
"output_type": "execute_result" | |
} | |
], | |
"source": [ | |
"sharevde_title_label" | |
] | |
}, | |
{ | |
"cell_type": "code", | |
"execution_count": 16, | |
"metadata": {}, | |
"outputs": [ | |
{ | |
"data": { | |
"text/plain": [ | |
"rdflib.term.Literal('Parable of the sower')" | |
] | |
}, | |
"execution_count": 16, | |
"metadata": {}, | |
"output_type": "execute_result" | |
} | |
], | |
"source": [ | |
"loc_title_label" | |
] | |
}, | |
{ | |
"cell_type": "code", | |
"execution_count": 17, | |
"metadata": {}, | |
"outputs": [ | |
{ | |
"data": { | |
"text/plain": [ | |
"rdflib.term.Literal('Parable of the Sower', lang='eng')" | |
] | |
}, | |
"execution_count": 17, | |
"metadata": {}, | |
"output_type": "execute_result" | |
} | |
], | |
"source": [ | |
"sinopia_title_label" | |
] | |
}, | |
{ | |
"cell_type": "markdown", | |
"metadata": {}, | |
"source": [ | |
"## Visualizating the RDF" | |
] | |
}, | |
{ | |
"cell_type": "code", | |
"execution_count": 18, | |
"metadata": {}, | |
"outputs": [ | |
{ | |
"data": { | |
"text/html": [ | |
"\n", | |
" <iframe\n", | |
" width=\"500px\"\n", | |
" height=\"500px\"\n", | |
" src=\"works_viz.html\"\n", | |
" frameborder=\"0\"\n", | |
" allowfullscreen\n", | |
" ></iframe>\n", | |
" " | |
], | |
"text/plain": [ | |
"<IPython.lib.display.IFrame at 0x7fc403b08eb0>" | |
] | |
}, | |
"execution_count": 18, | |
"metadata": {}, | |
"output_type": "execute_result" | |
} | |
], | |
"source": [ | |
"bf_works_graph = rdflib.Graph()\n", | |
"bf_works_graph.namespace_manager.bind(\"bf\", BF)\n", | |
"bf_works_graph.parse(data=sharevde_title_rdf, format='turtle')\n", | |
"bf_works_graph.parse(data=loc_title_rdf, format='turtle')\n", | |
"bf_works_graph.parse(data=sinopia_title_rdf, format='turtle')\n", | |
"\n", | |
"bf_works_kg = kglab.KnowledgeGraph(\n", | |
" import_graph=bf_works_graph,\n", | |
" namespaces=namespaces\n", | |
")\n", | |
"\n", | |
"bf_works_subgraph = kglab.SubgraphTensor(bf_works_kg)\n", | |
"pyvis_bf_works_graph = bf_works_subgraph.build_pyvis_graph(notebook=True)\n", | |
"pyvis_bf_works_graph.force_atlas_2based()\n", | |
"pyvis_bf_works_graph.show(\"works_viz.html\")" | |
] | |
}, | |
{ | |
"cell_type": "markdown", | |
"metadata": {}, | |
"source": [ | |
"## Validating with SHACL\n", | |
"We will use this simple validation graph to check to see " | |
] | |
}, | |
{ | |
"cell_type": "code", | |
"execution_count": 19, | |
"metadata": {}, | |
"outputs": [], | |
"source": [ | |
"bf_shacl = \"\"\"@prefix sh: <http://www.w3.org/ns/shacl#> .\n", | |
"@prefix bf: <http://id.loc.gov/ontologies/bibframe/> .\n", | |
"@prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> .\n", | |
"@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .\n", | |
"@prefix xsd: <http://www.w3.org/2001/XMLSchema#> .\n", | |
"\n", | |
"bf:WorkShape ;\n", | |
" a sh:NodeShape ;\n", | |
" sh:targetClass bf:Work ;\n", | |
" sh:property [\n", | |
" sh:path bf:title ;\n", | |
" sh:class bf:Title ;\n", | |
" sh:node bf:TitleShape ;\n", | |
" ] .\n", | |
"\n", | |
"bf:TitleShape\n", | |
" a sh:NodeShape ;\n", | |
" sh:targetClass bf:Title ;\n", | |
" sh:nodeKind sh:BlankNodeOrIRI ;\n", | |
" sh:property [\n", | |
" sh:path rdfs:label ;\n", | |
" sh:datatype xsd:string ;\n", | |
" ] ;\n", | |
" sh:property [\n", | |
" sh:path bf:mainTitle ;\n", | |
" sh:datatype rdf:langString ; \n", | |
" ] .\n", | |
"\"\"\"" | |
] | |
}, | |
{ | |
"cell_type": "markdown", | |
"metadata": {}, | |
"source": [ | |
"### ShareVDE" | |
] | |
}, | |
{ | |
"cell_type": "code", | |
"execution_count": 20, | |
"metadata": {}, | |
"outputs": [ | |
{ | |
"name": "stderr", | |
"output_type": "stream", | |
"text": [ | |
"Constraint Violation in ClassConstraintComponent (http://www.w3.org/ns/shacl#ClassConstraintComponent):\n", | |
"\tSeverity: sh:Violation\n", | |
"\tSource Shape: [ sh:class bf:Title ; sh:node bf:TitleShape ; sh:path bf:title ]\n", | |
"\tFocus Node: <http://share-vde.org/sharevde/rdfBibframe/Work/7985783-1>\n", | |
"\tValue Node: <http://share-vde.org/sharevde/rdfBibframe/Title_996/0409b9ef-0416-3b57-8826-259ebc9fdb53>\n", | |
"\tResult Path: bf:title\n", | |
"\tMessage: Value does not have class bf:Title\n", | |
"\n" | |
] | |
} | |
], | |
"source": [ | |
"sharevde_validation_results = pyshacl.validate(\n", | |
" sharevde_title_rdf,\n", | |
" shacl_graph=bf_shacl,\n", | |
" data_graph_format=\"ttl\",\n", | |
" shacl_graph_format=\"ttl\",\n", | |
" inference=\"rdfs\",\n", | |
" debug=True,\n", | |
" serialize_report_graph=\"ttl\"\n", | |
")" | |
] | |
}, | |
{ | |
"cell_type": "markdown", | |
"metadata": {}, | |
"source": [ | |
"### Library of Congress" | |
] | |
}, | |
{ | |
"cell_type": "code", | |
"execution_count": 21, | |
"metadata": {}, | |
"outputs": [ | |
{ | |
"name": "stderr", | |
"output_type": "stream", | |
"text": [ | |
"Constraint Violation in DatatypeConstraintComponent (http://www.w3.org/ns/shacl#DatatypeConstraintComponent):\n", | |
"\tSeverity: sh:Violation\n", | |
"\tSource Shape: [ sh:datatype rdf:langString ; sh:path bf:mainTitle ]\n", | |
"\tFocus Node: [ bf:mainTitle Literal(\"Parable of the sower\") ; rdf:type bf:Title, rdfs:Resource ; rdfs:label Literal(\"Parable of the sower\") ]\n", | |
"\tValue Node: Literal(\"Parable of the sower\")\n", | |
"\tResult Path: bf:mainTitle\n", | |
"\tMessage: Value is not Literal with datatype rdf:langString\n", | |
"\n", | |
"Constraint Violation in NodeConstraintComponent (http://www.w3.org/ns/shacl#NodeConstraintComponent):\n", | |
"\tSeverity: sh:Violation\n", | |
"\tSource Shape: [ sh:class bf:Title ; sh:node bf:TitleShape ; sh:path bf:title ]\n", | |
"\tFocus Node: <http://id.loc.gov/resources/works/21223749>\n", | |
"\tValue Node: [ bf:mainTitle Literal(\"Parable of the sower\") ; rdf:type bf:Title, rdfs:Resource ; rdfs:label Literal(\"Parable of the sower\") ]\n", | |
"\tResult Path: bf:title\n", | |
"\tMessage: Value does not conform to Shape bf:TitleShape\n", | |
"\n", | |
"Constraint Violation in DatatypeConstraintComponent (http://www.w3.org/ns/shacl#DatatypeConstraintComponent):\n", | |
"\tSeverity: sh:Violation\n", | |
"\tSource Shape: [ sh:datatype rdf:langString ; sh:path bf:mainTitle ]\n", | |
"\tFocus Node: [ bf:mainTitle Literal(\"Parable of the sower\") ; rdf:type bf:Title, rdfs:Resource ; rdfs:label Literal(\"Parable of the sower\") ]\n", | |
"\tValue Node: Literal(\"Parable of the sower\")\n", | |
"\tResult Path: bf:mainTitle\n", | |
"\tMessage: Value is not Literal with datatype rdf:langString\n", | |
"\n" | |
] | |
} | |
], | |
"source": [ | |
"loc_validation_results = pyshacl.validate(\n", | |
" loc_title_rdf,\n", | |
" shacl_graph=bf_shacl,\n", | |
" data_graph_format=\"ttl\",\n", | |
" shacl_graph_format=\"ttl\",\n", | |
" inference=\"rdfs\",\n", | |
" debug=True,\n", | |
" serialize_report_graph=\"ttl\"\n", | |
")" | |
] | |
}, | |
{ | |
"cell_type": "markdown", | |
"metadata": {}, | |
"source": [ | |
"### Sinopia" | |
] | |
}, | |
{ | |
"cell_type": "code", | |
"execution_count": 22, | |
"metadata": {}, | |
"outputs": [ | |
{ | |
"name": "stderr", | |
"output_type": "stream", | |
"text": [ | |
"Constraint Violation in DatatypeConstraintComponent (http://www.w3.org/ns/shacl#DatatypeConstraintComponent):\n", | |
"\tSeverity: sh:Violation\n", | |
"\tSource Shape: [ sh:datatype xsd:string ; sh:path rdfs:label ]\n", | |
"\tFocus Node: [ bf:mainTitle Literal(\"Parable of the Sower\", lang=eng) ; rdf:type bf:Title, rdfs:Resource ; rdfs:label Literal(\"Parable of the Sower\", lang=eng) ]\n", | |
"\tValue Node: Literal(\"Parable of the Sower\", lang=eng)\n", | |
"\tResult Path: rdfs:label\n", | |
"\tMessage: Value is not Literal with datatype xsd:string\n", | |
"\n", | |
"Constraint Violation in NodeConstraintComponent (http://www.w3.org/ns/shacl#NodeConstraintComponent):\n", | |
"\tSeverity: sh:Violation\n", | |
"\tSource Shape: [ sh:class bf:Title ; sh:node bf:TitleShape ; sh:path bf:title ]\n", | |
"\tFocus Node: <https://api.stage.sinopia.io/resource/addeddfb-d87a-4e67-bcd3-c1e5a8df4e7c>\n", | |
"\tValue Node: [ bf:mainTitle Literal(\"Parable of the Sower\", lang=eng) ; rdf:type bf:Title, rdfs:Resource ; rdfs:label Literal(\"Parable of the Sower\", lang=eng) ]\n", | |
"\tResult Path: bf:title\n", | |
"\tMessage: Value does not conform to Shape bf:TitleShape\n", | |
"\n", | |
"Constraint Violation in DatatypeConstraintComponent (http://www.w3.org/ns/shacl#DatatypeConstraintComponent):\n", | |
"\tSeverity: sh:Violation\n", | |
"\tSource Shape: [ sh:datatype xsd:string ; sh:path rdfs:label ]\n", | |
"\tFocus Node: [ bf:mainTitle Literal(\"Parable of the Sower\", lang=eng) ; rdf:type bf:Title, rdfs:Resource ; rdfs:label Literal(\"Parable of the Sower\", lang=eng) ]\n", | |
"\tValue Node: Literal(\"Parable of the Sower\", lang=eng)\n", | |
"\tResult Path: rdfs:label\n", | |
"\tMessage: Value is not Literal with datatype xsd:string\n", | |
"\n" | |
] | |
} | |
], | |
"source": [ | |
"sinopia_validation_results = pyshacl.validate(\n", | |
" sinopia_title_rdf,\n", | |
" shacl_graph=bf_shacl,\n", | |
" data_graph_format=\"ttl\",\n", | |
" shacl_graph_format=\"ttl\",\n", | |
" inference=\"rdfs\",\n", | |
" debug=True,\n", | |
" serialize_report_graph=\"ttl\"\n", | |
")" | |
] | |
} | |
], | |
"metadata": { | |
"kernelspec": { | |
"display_name": "Python 3", | |
"language": "python", | |
"name": "python3" | |
}, | |
"language_info": { | |
"codemirror_mode": { | |
"name": "ipython", | |
"version": 3 | |
}, | |
"file_extension": ".py", | |
"mimetype": "text/x-python", | |
"name": "python", | |
"nbconvert_exporter": "python", | |
"pygments_lexer": "ipython3", | |
"version": "3.9.1" | |
} | |
}, | |
"nbformat": 4, | |
"nbformat_minor": 5 | |
} |
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<html> | |
<head> | |
<link rel="stylesheet" href="https://cdnjs.cloudflare.com/ajax/libs/vis/4.16.1/vis.css" type="text/css" /> | |
<script type="text/javascript" src="https://cdnjs.cloudflare.com/ajax/libs/vis/4.16.1/vis-network.min.js"> </script> | |
<center> | |
<h1></h1> | |
</center> | |
<!-- <link rel="stylesheet" href="../node_modules/vis/dist/vis.min.css" type="text/css" /> | |
<script type="text/javascript" src="../node_modules/vis/dist/vis.js"> </script>--> | |
<style type="text/css"> | |
#mynetwork { | |
width: 500px; | |
height: 500px; | |
background-color: #ffffff; | |
border: 1px solid lightgray; | |
position: relative; | |
float: left; | |
} | |
</style> | |
</head> | |
<body> | |
<div id = "mynetwork"></div> | |
<script type="text/javascript"> | |
// initialize global variables. | |
var edges; | |
var nodes; | |
var network; | |
var container; | |
var options, data; | |
// This method is responsible for drawing the graph, returns the drawn network | |
function drawGraph() { | |
var container = document.getElementById('mynetwork'); | |
// parsing and collecting nodes and edges from the python | |
nodes = new vis.DataSet([{"id": 0, "label": "\u003chttp://id.loc.gov/resources/works/21223749\u003e", "shape": "dot", "title": "\u003chttp://id.loc.gov/resources/works/21223749\u003e"}, {"id": 1, "label": "bf:Text", "shape": "dot", "title": "bf:Text"}, {"id": 2, "label": "\u003chttp://share-vde.org/sharevde/rdfBibframe/Work/7985783-1\u003e", "shape": "dot", "title": "\u003chttp://share-vde.org/sharevde/rdfBibframe/Work/7985783-1\u003e"}, {"id": 3, "label": "_:ub5bL5C14", "shape": "dot", "title": "_:ub5bL5C14"}, {"id": 4, "label": "Parable of the sower", "shape": "dot", "title": "Parable of the sower"}, {"id": 5, "label": "\u003chttp://share-vde.org/sharevde/rdfBibframe/Title_996/0409b9ef-0416-3b57-8826-259ebc9fdb53\u003e", "shape": "dot", "title": "\u003chttp://share-vde.org/sharevde/rdfBibframe/Title_996/0409b9ef-0416-3b57-8826-259ebc9fdb53\u003e"}, {"id": 6, "label": " Parable of the sower", "shape": "dot", "title": " Parable of the sower"}, {"id": 7, "label": "\u003chttps://api.stage.sinopia.io/resource/addeddfb-d87a-4e67-bcd3-c1e5a8df4e7c\u003e", "shape": "dot", "title": "\u003chttps://api.stage.sinopia.io/resource/addeddfb-d87a-4e67-bcd3-c1e5a8df4e7c\u003e"}, {"id": 8, "label": "_:ub6bL5C14", "shape": "dot", "title": "_:ub6bL5C14"}, {"id": 9, "label": "Parable of the Sower", "shape": "dot", "title": "Parable of the Sower"}, {"id": 10, "label": "bf:Work", "shape": "dot", "title": "bf:Work"}, {"id": 11, "label": "bf:Title", "shape": "dot", "title": "bf:Title"}]); | |
edges = new vis.DataSet([{"from": 0, "label": "rdf:type", "to": 1}, {"from": 2, "label": "rdf:type", "to": 1}, {"from": 3, "label": "rdfs:label", "to": 4}, {"from": 2, "label": "bf:title", "to": 5}, {"from": 5, "label": "rdfs:label", "to": 6}, {"from": 7, "label": "rdf:type", "to": 1}, {"from": 8, "label": "rdfs:label", "to": 9}, {"from": 7, "label": "bf:title", "to": 8}, {"from": 2, "label": "rdf:type", "to": 10}, {"from": 8, "label": "rdf:type", "to": 11}, {"from": 3, "label": "rdf:type", "to": 11}, {"from": 0, "label": "rdf:type", "to": 10}, {"from": 7, "label": "rdf:type", "to": 10}, {"from": 0, "label": "bf:title", "to": 3}]); | |
// adding nodes and edges to the graph | |
data = {nodes: nodes, edges: edges}; | |
var options = { | |
"configure": { | |
"enabled": false | |
}, | |
"edges": { | |
"color": { | |
"inherit": true | |
}, | |
"smooth": { | |
"enabled": false, | |
"type": "continuous" | |
} | |
}, | |
"interaction": { | |
"dragNodes": true, | |
"hideEdgesOnDrag": false, | |
"hideNodesOnDrag": false | |
}, | |
"physics": { | |
"enabled": true, | |
"forceAtlas2Based": { | |
"avoidOverlap": 0, | |
"centralGravity": 0.01, | |
"damping": 0.4, | |
"gravitationalConstant": -50, | |
"springConstant": 0.08, | |
"springLength": 100 | |
}, | |
"solver": "forceAtlas2Based", | |
"stabilization": { | |
"enabled": true, | |
"fit": true, | |
"iterations": 1000, | |
"onlyDynamicEdges": false, | |
"updateInterval": 50 | |
} | |
} | |
}; | |
network = new vis.Network(container, data, options); | |
return network; | |
} | |
drawGraph(); | |
</script> | |
</body> | |
</html> |
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