Keiichiro Ono keiono
keiono
/ go-sparse-compact.json
Created
January 19, 2017 19:06
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| {"elements": {"nodes": [{"position": {"y": 5225.130540324309, "x": 26434.14581455133}, "data": {"id": "GO:0043648", "geneCount": 41, "namespace": "biological_process", "name": "dicarboxylic acid metabolic process"}}, {"position": {"y": 4994.833690588063, "x": 18278.151549335544}, "data": {"id": "GO:0016973", "geneCount": 23, "namespace": "biological_process", "name": "poly(A)+ mRNA export from nucleus"}}, {"position": {"y": 10293.827600487639, "x": 7259.595449323835}, "data": {"id": "GO:0051724", "geneCount": 2, "namespace": "molecular_function", "name": "NAD transporter activity"}}, {"position": {"y": 10937.311645129412, "x": 5681.655348568354}, "data": {"id": "GO:0015297", "geneCount": 55, "namespace": "molecular_function", "name": "antiporter activity"}}, {"position": {"y": 6218.411515619352, "x": 19957.36951779087}, "data": {"id": "GO:0006869", "geneCount": 64, "namespace": "biological_process", "name": "lipid transport"}}, {"position": {"y": 5806.515867344653, "x": 17121.422794250302}, "data": {"id": "GO |
keiono
/ create_pdf_for_all_networks.ipynb
Created
January 19, 2017 01:57
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keiono
/ Create_all_images.ipynb
Created
January 18, 2017 23:07
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keiono
/ clixo-compact.json
Created
January 13, 2017 23:21
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| {"elements": {"edges": [{"data": {"target": "CLIXO:10702", "source": "CLIXO:7438"}}, {"data": {"target": "CLIXO:9105", "source": "CLIXO:8037"}}, {"data": {"target": "CLIXO:10355", "source": "CLIXO:7370"}}, {"data": {"target": "CLIXO:10546", "source": "CLIXO:7428"}}, {"data": {"target": "CLIXO:10611", "source": "CLIXO:6325"}}, {"data": {"target": "CLIXO:9762", "source": "CLIXO:8189"}}, {"data": {"target": "CLIXO:10695", "source": "CLIXO:6768"}}, {"data": {"target": "CLIXO:10463", "source": "CLIXO:10217"}}, {"data": {"target": "CLIXO:7911", "source": "CLIXO:6068"}}, {"data": {"target": "CLIXO:10697", "source": "CLIXO:10508"}}, {"data": {"target": "CLIXO:10557", "source": "CLIXO:8811"}}, {"data": {"target": "CLIXO:10587", "source": "CLIXO:10541"}}, {"data": {"target": "CLIXO:10379", "source": "CLIXO:7289"}}, {"data": {"target": "CLIXO:9569", "source": "CLIXO:7138"}}, {"data": {"target": "CLIXO:9670", "source": "CLIXO:7601"}}, {"data": {"target": "CLIXO:8931", "source": "CLIXO:8146"}}, {"data": {"target": "CLIXO: |
keiono
/ clixo-compact.json
Created
January 13, 2017 21:26
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| {"elements": {"edges": [{"data": {"target": "CLIXO:10589", "source": "CLIXO:10545"}}, {"data": {"target": "CLIXO:10392", "source": "CLIXO:9735"}}, {"data": {"target": "CLIXO:10258", "source": "CLIXO:8651"}}, {"data": {"target": "CLIXO:8927", "source": "CLIXO:8591"}}, {"data": {"target": "CLIXO:10219", "source": "CLIXO:7808"}}, {"data": {"target": "CLIXO:9491", "source": "CLIXO:9327"}}, {"data": {"target": "CLIXO:10019", "source": "CLIXO:5913"}}, {"data": {"target": "CLIXO:10127", "source": "CLIXO:9433"}}, {"data": {"target": "CLIXO:8156", "source": "CLIXO:7146"}}, {"data": {"target": "CLIXO:9075", "source": "CLIXO:6952"}}, {"data": {"target": "CLIXO:10257", "source": "CLIXO:8750"}}, {"data": {"target": "CLIXO:10671", "source": "CLIXO:7472"}}, {"data": {"target": "CLIXO:10618", "source": "CLIXO:8179"}}, {"data": {"target": "CLIXO:10663", "source": "CLIXO:9977"}}, {"data": {"target": "CLIXO:9053", "source": "CLIXO:8642"}}, {"data": {"target": "CLIXO:10672", "source": "CLIXO:9163"}}, {"data": {"target": "CLIXO:1 |
keiono
/ save_image.ipynb
Created
January 12, 2017 17:30
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keiono
/ go-compact.json
Created
January 11, 2017 02:14
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| {"elements": {"edges": [{"data": {"branch": "BP", "source": "GO:0043648", "target": "GO:0043649"}}, {"data": {"branch": "BP", "source": "GO:0043648", "target": "GO:0043650"}}, {"data": {"branch": "BP", "source": "GO:0043648", "target": "GO:0006105"}}, {"data": {"branch": "BP", "source": "GO:0043648", "target": "GO:0006103"}}, {"data": {"branch": "BP", "source": "GO:0043648", "target": "GO:0006531"}}, {"data": {"branch": "BP", "source": "GO:0043648", "target": "GO:0006536"}}, {"data": {"branch": "BP", "source": "GO:0043648", "target": "GO:0006108"}}, {"data": {"branch": "BP", "source": "GO:0043648", "target": "GO:0006106"}}, {"data": {"branch": "BP", "source": "GO:0043648", "target": "GO:0046874"}}, {"data": {"branch": "BP", "source": "GO:0043648", "target": "GO:0046417"}}, {"data": {"branch": "MF", "source": "GO:0015297", "target": "GO:0099516"}}, {"data": {"branch": "MF", "source": "GO:0015297", "target": "GO:0015299"}}, {"data": {"branch": "MF", "source": "GO:0015297", "target": "GO:0005476"}}, {"data": {"b |
keiono
/ go-compact.json
Created
January 11, 2017 02:05
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| {"elements": {"edges": [{"data": {"branch": "BP", "source": "GO:0043648", "target": "GO:0043649"}}, {"data": {"branch": "BP", "source": "GO:0043648", "target": "GO:0043650"}}, {"data": {"branch": "BP", "source": "GO:0043648", "target": "GO:0006105"}}, {"data": {"branch": "BP", "source": "GO:0043648", "target": "GO:0006103"}}, {"data": {"branch": "BP", "source": "GO:0043648", "target": "GO:0006531"}}, {"data": {"branch": "BP", "source": "GO:0043648", "target": "GO:0006536"}}, {"data": {"branch": "BP", "source": "GO:0043648", "target": "GO:0006108"}}, {"data": {"branch": "BP", "source": "GO:0043648", "target": "GO:0006106"}}, {"data": {"branch": "BP", "source": "GO:0043648", "target": "GO:0046874"}}, {"data": {"branch": "BP", "source": "GO:0043648", "target": "GO:0046417"}}, {"data": {"branch": "MF", "source": "GO:0015297", "target": "GO:0099516"}}, {"data": {"branch": "MF", "source": "GO:0015297", "target": "GO:0015299"}}, {"data": {"branch": "MF", "source": "GO:0015297", "target": "GO:0005476"}}, {"data": {"b |
keiono
/ go-compact.json
Created
January 11, 2017 01:45
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| {"elements": {"edges": [{"data": {"branch": "BP", "source": "GO:0043648", "target": "GO:0043649"}}, {"data": {"branch": "BP", "source": "GO:0043648", "target": "GO:0043650"}}, {"data": {"branch": "BP", "source": "GO:0043648", "target": "GO:0006105"}}, {"data": {"branch": "BP", "source": "GO:0043648", "target": "GO:0006103"}}, {"data": {"branch": "BP", "source": "GO:0043648", "target": "GO:0006531"}}, {"data": {"branch": "BP", "source": "GO:0043648", "target": "GO:0006536"}}, {"data": {"branch": "BP", "source": "GO:0043648", "target": "GO:0006108"}}, {"data": {"branch": "BP", "source": "GO:0043648", "target": "GO:0006106"}}, {"data": {"branch": "BP", "source": "GO:0043648", "target": "GO:0046874"}}, {"data": {"branch": "BP", "source": "GO:0043648", "target": "GO:0046417"}}, {"data": {"branch": "MF", "source": "GO:0015297", "target": "GO:0099516"}}, {"data": {"branch": "MF", "source": "GO:0015297", "target": "GO:0015299"}}, {"data": {"branch": "MF", "source": "GO:0015297", "target": "GO:0005476"}}, {"data": {"b |
keiono
/ go-compact.json
Created
January 11, 2017 01:41
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| {"elements": {"edges": [{"data": {"source": "GO:0043648", "target": "GO:0043649"}}, {"data": {"source": "GO:0043648", "target": "GO:0043650"}}, {"data": {"source": "GO:0043648", "target": "GO:0006105"}}, {"data": {"source": "GO:0043648", "target": "GO:0006103"}}, {"data": {"source": "GO:0043648", "target": "GO:0006531"}}, {"data": {"source": "GO:0043648", "target": "GO:0006536"}}, {"data": {"source": "GO:0043648", "target": "GO:0006108"}}, {"data": {"source": "GO:0043648", "target": "GO:0006106"}}, {"data": {"source": "GO:0043648", "target": "GO:0046874"}}, {"data": {"source": "GO:0043648", "target": "GO:0046417"}}, {"data": {"source": "GO:0015297", "target": "GO:0099516"}}, {"data": {"source": "GO:0015297", "target": "GO:0015299"}}, {"data": {"source": "GO:0015297", "target": "GO:0005476"}}, {"data": {"source": "GO:0006869", "target": "GO:0032368"}}, {"data": {"source": "GO:0006869", "target": "GO:0032365"}}, {"data": {"source": "GO:0033683", "target": "GO:0006295"}}, {"data": {"source": "GO:0033683", "targe |