Last active
June 14, 2016 17:11
-
-
Save kozo2/23934284fb3419167e99945fd8746977 to your computer and use it in GitHub Desktop.
bh16 sparqls
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| PREFIX rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> | |
| PREFIX rdfs: <http://www.w3.org/2000/01/rdf-schema#> | |
| PREFIX owl: <http://www.w3.org/2002/07/owl#> | |
| PREFIX xsd: <http://www.w3.org/2001/XMLSchema#> | |
| PREFIX dc: <http://purl.org/dc/elements/1.1/> | |
| PREFIX dcterms: <http://purl.org/dc/terms/> | |
| PREFIX foaf: <http://xmlns.com/foaf/0.1/> | |
| PREFIX skos: <http://www.w3.org/2004/02/skos/core#> | |
| PREFIX biopax3: <http://www.biopax.org/release/biopax-level3.owl#> | |
| SELECT DISTINCT ?pathway ?pathwayname ?rea ?l ?r | |
| WHERE | |
| { | |
| ?pathway rdf:type biopax3:Pathway . | |
| ?pathway biopax3:displayName ?pathwayname . | |
| ?pathway biopax3:organism <http://identifiers.org/taxonomy/4932> . | |
| ?pathway biopax3:pathwayComponent ?rea . | |
| ?rea biopax3:left ?l . | |
| ?rea biopax3:right ?r . | |
| } | |
| LIMIT 100 |
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| PREFIX rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> | |
| PREFIX rdfs: <http://www.w3.org/2000/01/rdf-schema#> | |
| PREFIX owl: <http://www.w3.org/2002/07/owl#> | |
| PREFIX xsd: <http://www.w3.org/2001/XMLSchema#> | |
| PREFIX dc: <http://purl.org/dc/elements/1.1/> | |
| PREFIX dcterms: <http://purl.org/dc/terms/> | |
| PREFIX foaf: <http://xmlns.com/foaf/0.1/> | |
| PREFIX skos: <http://www.w3.org/2004/02/skos/core#> | |
| PREFIX biopax3: <http://www.biopax.org/release/biopax-level3.owl#> | |
| SELECT DISTINCT ?pathway ?pathwayname | |
| WHERE | |
| {?pathway rdf:type biopax3:Pathway . | |
| ?pathway biopax3:displayName ?pathwayname . | |
| ?pathway biopax3:pathwayComponent ?reaction . | |
| ?reaction rdf:type biopax3:BiochemicalReaction . | |
| { | |
| {?reaction ?rel ?protein .} | |
| UNION | |
| { | |
| ?reaction ?rel ?complex . | |
| ?complex rdf:type biopax3:Complex . | |
| ?complex ?comp ?protein . | |
| }} | |
| ?protein rdf:type biopax3:Protein . | |
| ?protein biopax3:entityReference <http://purl.uniprot.org/uniprot/P01308> | |
| } | |
| LIMIT 100 |
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment