Skip to content

Instantly share code, notes, and snippets.

@kozo2
Created January 12, 2016 21:25
Show Gist options
  • Select an option

  • Save kozo2/e68a2948fcc5c8f58033 to your computer and use it in GitHub Desktop.

Select an option

Save kozo2/e68a2948fcc5c8f58033 to your computer and use it in GitHub Desktop.
gd = list(join1 = c(ag.db="gene_id", org.At.tair.db="gene_id"))
destination <- tempfile()
dir.create(destination)
library("OrganismDbi", lib.loc="~/R/win-library/3.2")
makeOrganismPackage(pkgname = "hoge.fuga", graphData = gd, organism = "Arabidopsis thaliana", version = "1.0.0", maintainer = "Kozo Nishida<knishida@riken.jp>", author = "Some Body", destDir = destination, license = "Artistic-2.0")
Error in .testKeys(fkeys) :
some foreign keys are not present in their associated databases
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment