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January 1, 2021 04:44
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{ | |
"cells": [ | |
{ | |
"cell_type": "markdown", | |
"metadata": {}, | |
"source": [ | |
"# Linked Structures\n", | |
"\n", | |
"## Agenda\n", | |
"\n", | |
"1. Motives\n", | |
"2. Objectives\n", | |
"3. Mechanisms\n", | |
"4. Linked Data Structures" | |
] | |
}, | |
{ | |
"cell_type": "markdown", | |
"metadata": {}, | |
"source": [ | |
"## 1. Motives" | |
] | |
}, | |
{ | |
"cell_type": "code", | |
"execution_count": null, | |
"metadata": {}, | |
"outputs": [], | |
"source": [ | |
"%matplotlib inline\n", | |
"import matplotlib.pyplot as plt\n", | |
"import numpy as np\n", | |
"from timeit import timeit\n", | |
"\n", | |
"def time_array_front_insert_delete(n):\n", | |
" return timeit('lst.insert(0, None) ; del lst[0]',\n", | |
" 'lst = list(range({}))'.format(n),\n", | |
" number=1000)\n", | |
"\n", | |
"ns = np.linspace(100, 10000, 50)\n", | |
"plt.plot(ns, [time_array_front_insert_delete(int(n)) for n in ns], 'ro')\n", | |
"plt.show()" | |
] | |
}, | |
{ | |
"cell_type": "code", | |
"execution_count": null, | |
"metadata": {}, | |
"outputs": [], | |
"source": [ | |
"# consider:\n", | |
"\n", | |
"def concatenate(arr1, arr2):\n", | |
" \"\"\"Concatenates the contents of arr1 and arr2 as efficiently (time-wise)\n", | |
" as possible, so that the resulting structure can be used to index all\n", | |
" combined elements (arr1's followed by arr2's).\"\"\"\n", | |
"\n", | |
" # option 1: O(?)\n", | |
" for x in arr2:\n", | |
" arr1.append(x)\n", | |
" return arr1\n", | |
"\n", | |
" # option 2: O(?)\n", | |
" arr1.extend(arr2)\n", | |
" return arr1\n", | |
"\n", | |
" # option 3: O(?)\n", | |
" return arr1 + arr2" | |
] | |
}, | |
{ | |
"cell_type": "markdown", | |
"metadata": {}, | |
"source": [ | |
"## 2. Objectives\n", | |
"\n", | |
"We would like a new data storage mechanism for constructing data structures that:\n", | |
"\n", | |
"- does not require monolithic, contiguous memory allocation,\n", | |
"- allows individual elements to be flexibly and efficiently reorganized,\n", | |
"- and preserves the ability to locate (e.g., via position) and iterate over elements" | |
] | |
}, | |
{ | |
"cell_type": "markdown", | |
"metadata": {}, | |
"source": [ | |
"## 3. Mechanisms" | |
] | |
}, | |
{ | |
"cell_type": "markdown", | |
"metadata": {}, | |
"source": [ | |
"### 3.1. Two-Element Lists" | |
] | |
}, | |
{ | |
"cell_type": "code", | |
"execution_count": null, | |
"metadata": {}, | |
"outputs": [], | |
"source": [ | |
"# data items\n", | |
"i1 = 'lions'\n", | |
"i2 = 'tigers'\n", | |
"i3 = 'bears'\n", | |
"i4 = 'oh, my'" | |
] | |
}, | |
{ | |
"cell_type": "code", | |
"execution_count": null, | |
"metadata": {}, | |
"outputs": [], | |
"source": [ | |
"# creating individual \"links\"\n", | |
"l1 = [,]\n", | |
"l2 = [,]\n", | |
"l3 = [,]\n", | |
"l4 = [,]" | |
] | |
}, | |
{ | |
"cell_type": "code", | |
"execution_count": null, | |
"metadata": {}, | |
"outputs": [], | |
"source": [ | |
"# link-ing them together\n" | |
] | |
}, | |
{ | |
"cell_type": "code", | |
"execution_count": null, | |
"metadata": {}, | |
"outputs": [], | |
"source": [ | |
"# iteration\n" | |
] | |
}, | |
{ | |
"cell_type": "code", | |
"execution_count": null, | |
"metadata": {}, | |
"outputs": [], | |
"source": [ | |
"# prepending\n", | |
"\n", | |
"i0 = 'walruses'" | |
] | |
}, | |
{ | |
"cell_type": "code", | |
"execution_count": null, | |
"metadata": {}, | |
"outputs": [], | |
"source": [ | |
"# insertion\n", | |
"\n", | |
"i2_5 = 'elephants'" | |
] | |
}, | |
{ | |
"cell_type": "code", | |
"execution_count": null, | |
"metadata": {}, | |
"outputs": [], | |
"source": [ | |
"# deletion\n" | |
] | |
}, | |
{ | |
"cell_type": "markdown", | |
"metadata": {}, | |
"source": [ | |
"### 3.2. \"Link\" objects" | |
] | |
}, | |
{ | |
"cell_type": "code", | |
"execution_count": null, | |
"metadata": {}, | |
"outputs": [], | |
"source": [ | |
"class Link:\n", | |
" def __init__(self, val, next=None):\n", | |
" self.val = val\n", | |
" self.next = next" | |
] | |
}, | |
{ | |
"cell_type": "code", | |
"execution_count": null, | |
"metadata": {}, | |
"outputs": [], | |
"source": [ | |
"# manually constructing a list\n" | |
] | |
}, | |
{ | |
"cell_type": "code", | |
"execution_count": null, | |
"metadata": {}, | |
"outputs": [], | |
"source": [ | |
"# prepending\n", | |
"\n", | |
"def prepend(l, val):\n", | |
" pass" | |
] | |
}, | |
{ | |
"cell_type": "code", | |
"execution_count": null, | |
"metadata": {}, | |
"outputs": [], | |
"source": [ | |
"l = None\n", | |
"for x in range(10):\n", | |
" l = prepend(l, x)" | |
] | |
}, | |
{ | |
"cell_type": "code", | |
"execution_count": null, | |
"metadata": {}, | |
"outputs": [], | |
"source": [ | |
"# iterator\n", | |
"\n", | |
"def link_iterator(l):\n", | |
" yield" | |
] | |
}, | |
{ | |
"cell_type": "code", | |
"execution_count": null, | |
"metadata": {}, | |
"outputs": [], | |
"source": [ | |
"for x in link_iterator(l):\n", | |
" print(x)" | |
] | |
}, | |
{ | |
"cell_type": "code", | |
"execution_count": null, | |
"metadata": {}, | |
"outputs": [], | |
"source": [ | |
"# iteration based on a recursive pattern\n", | |
"\n", | |
"def link_iterator_rec(l):\n", | |
" yield" | |
] | |
}, | |
{ | |
"cell_type": "code", | |
"execution_count": null, | |
"metadata": {}, | |
"outputs": [], | |
"source": [ | |
"for x in link_iterator_rec(l):\n", | |
" print(x)" | |
] | |
}, | |
{ | |
"cell_type": "markdown", | |
"metadata": {}, | |
"source": [ | |
"## 4. Linked Data Structures" | |
] | |
}, | |
{ | |
"cell_type": "markdown", | |
"metadata": {}, | |
"source": [ | |
"### 4.1 Linked List" | |
] | |
}, | |
{ | |
"cell_type": "code", | |
"execution_count": null, | |
"metadata": {}, | |
"outputs": [], | |
"source": [ | |
"class LinkedList:\n", | |
" class Link:\n", | |
" def __init__(self, val, next=None):\n", | |
" self.val = val\n", | |
" self.next = next\n", | |
"\n", | |
" def __init__(self):\n", | |
" self.head = None\n", | |
" \n", | |
" def prepend(self, val):\n", | |
" pass\n", | |
" \n", | |
" def __iter__(self):\n", | |
" pass\n", | |
" \n", | |
" def __repr__(self):\n", | |
" return '[' + ', '.join(str(x) for x in self) + ']'" | |
] | |
}, | |
{ | |
"cell_type": "code", | |
"execution_count": null, | |
"metadata": {}, | |
"outputs": [], | |
"source": [ | |
"l = LinkedList()\n", | |
"for x in range(10):\n", | |
" l.prepend(x)\n", | |
"l" | |
] | |
}, | |
{ | |
"cell_type": "markdown", | |
"metadata": {}, | |
"source": [ | |
"### 4.2 Binary Tree" | |
] | |
}, | |
{ | |
"cell_type": "code", | |
"execution_count": null, | |
"metadata": {}, | |
"outputs": [], | |
"source": [ | |
"class BinaryLink:\n", | |
" def __init__(self, val, left=None, right=None):\n", | |
" self.val = val\n", | |
" self.left = left\n", | |
" self.right = right" | |
] | |
}, | |
{ | |
"cell_type": "code", | |
"execution_count": null, | |
"metadata": {}, | |
"outputs": [], | |
"source": [ | |
"# manual construction of a \"tree\" representing the expression ((5+3)*(8-4))\n", | |
"t = BinaryLink('*')\n", | |
"t.left = BinaryLink('+')\n", | |
"t.left.left = BinaryLink('5')\n", | |
"t.left.right = BinaryLink('3')\n", | |
"t.right = BinaryLink('-')\n", | |
"t.right.left = BinaryLink('8')\n", | |
"t.right.right = BinaryLink('4')" | |
] | |
}, | |
{ | |
"cell_type": "code", | |
"execution_count": null, | |
"metadata": {}, | |
"outputs": [], | |
"source": [ | |
"def print_expr_tree(t):\n", | |
" if t:\n", | |
" if not t.val.isdigit():\n", | |
" print('(', end='')\n", | |
" print_expr_tree(t.left)\n", | |
" print(t.val, end='')\n", | |
" print_expr_tree(t.right)\n", | |
" if not t.val.isdigit():\n", | |
" print(')', end='')" | |
] | |
}, | |
{ | |
"cell_type": "code", | |
"execution_count": null, | |
"metadata": {}, | |
"outputs": [], | |
"source": [ | |
"print_expr_tree(t)" | |
] | |
}, | |
{ | |
"cell_type": "markdown", | |
"metadata": { | |
"collapsed": true | |
}, | |
"source": [ | |
"### 4.3 N-ary Tree" | |
] | |
}, | |
{ | |
"cell_type": "code", | |
"execution_count": null, | |
"metadata": {}, | |
"outputs": [], | |
"source": [ | |
"class NaryLink:\n", | |
" def __init__(self, val, n=2):\n", | |
" self.val = val\n", | |
" self.children = [None] * n\n", | |
" \n", | |
" def __getitem__(self, idx):\n", | |
" return self.children[idx]\n", | |
" \n", | |
" def __setitem__(self, idx, val):\n", | |
" self.children[idx] = val\n", | |
" \n", | |
" def __iter__(self):\n", | |
" for c in self.children:\n", | |
" yield c" | |
] | |
}, | |
{ | |
"cell_type": "code", | |
"execution_count": null, | |
"metadata": {}, | |
"outputs": [], | |
"source": [ | |
"root = NaryLink('Kingdoms', n=5)\n", | |
"\n", | |
"root[0] = NaryLink('Animalia', n=35)\n", | |
"root[1] = NaryLink('Plantae', n=12)\n", | |
"root[2] = NaryLink('Fungi', n=7)\n", | |
"root[3] = NaryLink('Protista', n=5)\n", | |
"root[4] = NaryLink('Monera', n=5)\n", | |
"\n", | |
"root[2][0] = NaryLink('Chytridiomycota')\n", | |
"root[2][1] = NaryLink('Blastocladiomycota')\n", | |
"root[2][2] = NaryLink('Glomeromycota')\n", | |
"root[2][3] = NaryLink('Ascomycota')\n", | |
"root[2][4] = NaryLink('Basidiomycota')\n", | |
"root[2][5] = NaryLink('Microsporidia')\n", | |
"root[2][6] = NaryLink('Neocallimastigomycota')\n", | |
"\n", | |
"def tree_iter(root):\n", | |
" if root:\n", | |
" yield root.val\n", | |
" for c in root:\n", | |
" yield from tree_iter(c)" | |
] | |
}, | |
{ | |
"cell_type": "code", | |
"execution_count": null, | |
"metadata": { | |
"scrolled": true | |
}, | |
"outputs": [], | |
"source": [ | |
"for x in tree_iter(root):\n", | |
" print(x)" | |
] | |
} | |
], | |
"metadata": { | |
"kernelspec": { | |
"display_name": "Python 3", | |
"language": "python", | |
"name": "python3" | |
}, | |
"language_info": { | |
"codemirror_mode": { | |
"name": "ipython", | |
"version": 3 | |
}, | |
"file_extension": ".py", | |
"mimetype": "text/x-python", | |
"name": "python", | |
"nbconvert_exporter": "python", | |
"pygments_lexer": "ipython3", | |
"version": "3.7.2" | |
} | |
}, | |
"nbformat": 4, | |
"nbformat_minor": 1 | |
} |
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