Example mapping stats Report

example_mapping_stats_report.json

{
    "_changelist": "UNKNOWN", 
    "_version": "0.3.5", 
    "attributes": [
        {
            "id": "mapping_stats.mapped_subread_bases_n", 
            "name": "Mapped Subread Bases", 
            "value": 281731533
        }, 
        {
            "id": "mapping_stats.mapped_readlength_max", 
            "name": "Mapped Polymerase Read Length Max", 
            "value": 43977
        }, 
        {
            "id": "mapping_stats.number_of_aligned_reads", 
            "name": "Number of Aligned Reads", 
            "value": 59073
        }, 
        {
            "id": "mapping_stats.mapped_reads_n", 
            "name": "Mapped Reads", 
            "value": 59073
        }, 
        {
            "id": "mapping_stats.mapped_bases_n", 
            "name": "Mapped Polymerase Bases", 
            "value": 334131823
        }, 
        {
            "id": "mapping_stats.mapped_subread_readlength_mean", 
            "name": "Mapped Subread Length", 
            "value": 1178
        }, 
        {
            "id": "mapping_stats.mapped_readlength_n50", 
            "name": "Mapped N50", 
            "value": 13119
        }, 
        {
            "id": "mapping_stats.mapped_subread_accuracy_mean", 
            "name": "Mapped Subread Accuracy", 
            "value": 0.79500000000000004
        }, 
        {
            "id": "mapping_stats.mapped_subread_read_quality_mean", 
            "name": "Mapped Subread Read Quality", 
            "value": 0.69999999999999996
        }, 
        {
            "id": "mapping_stats.mapped_subreads_n", 
            "name": "Mapped Subreads", 
            "value": 239232
        }, 
        {
            "id": "mapping_stats.mapped_readlength_q95", 
            "name": "Mapped Polymerase Read Length 95%", 
            "value": 20530
        }, 
        {
            "id": "mapping_stats.mapped_subreadlength_n50", 
            "name": "Mapped Subread N50", 
            "value": 1589
        }, 
        {
            "id": "mapping_stats.mapped_readlength_mean", 
            "name": "Mapped Polymerase Read Length", 
            "value": 5656
        }
    ], 
    "dataset_uuids": [
        "f16745e6-387e-cc47-bd61-d30a1a30226e"
    ], 
    "id": "mapping_stats", 
    "plotGroups": [
        {
            "id": "mapping_stats.subread_accuracy_group", 
            "legend": null, 
            "plots": [
                {
                    "caption": null, 
                    "id": "mapping_stats.subread_accuracy_group.subread_accuracy_group_accuracy_plot", 
                    "image": "mapped_subread_accuracy_histogram.png"
                }
            ], 
            "thumbnail": "mapped_subread_accuracy_histogram_thumb.png", 
            "title": "Mapped Subread Accuracy"
        }, 
        {
            "id": "mapping_stats.readlength_plot", 
            "legend": null, 
            "plots": [
                {
                    "caption": null, 
                    "id": "mapping_stats.readlength_plot.readlength_plot", 
                    "image": "mapped_readlength_histogram.png"
                }
            ], 
            "thumbnail": "mapped_readlength_histogram_thumb.png", 
            "title": "Mapped Polymerase Read Length"
        }, 
        {
            "id": "mapping_stats.subreadlength_plot", 
            "legend": null, 
            "plots": [
                {
                    "caption": null, 
                    "id": "mapping_stats.subreadlength_plot.subreadlength_plot", 
                    "image": "mapped_subreadlength_histogram.png"
                }
            ], 
            "thumbnail": "mapped_subreadlength_histogram_thumb.png", 
            "title": "Mapped Subread Length"
        }
    ], 
    "tables": [
        {
            "columns": [
                {
                    "header": "Movie", 
                    "id": "mapping_stats.mapping_stats_table.movie", 
                    "values": [
                        "All Movies", 
                        "m54003_160115_210006"
                    ]
                }, 
                {
                    "header": "Mapped Reads", 
                    "id": "mapping_stats.mapping_stats_table.mapped_reads", 
                    "values": [
                        59073, 
                        59073
                    ]
                }, 
                {
                    "header": "Mapped Polymerase Read Length", 
                    "id": "mapping_stats.mapping_stats_table.mapped_polymerase_read_length", 
                    "values": [
                        5656, 
                        5656
                    ]
                }, 
                {
                    "header": "Mapped Polymerase Read Length n50", 
                    "id": "mapping_stats.mapping_stats_table.mapped_polymerase_read_length_n50", 
                    "values": [
                        13119, 
                        13119
                    ]
                }, 
                {
                    "header": "Mapped Subreads", 
                    "id": "mapping_stats.mapping_stats_table.mapped_subreads", 
                    "values": [
                        239232, 
                        239232
                    ]
                }, 
                {
                    "header": "Mapped Subread Bases", 
                    "id": "mapping_stats.mapping_stats_table.mapped_subread_base", 
                    "values": [
                        281731533, 
                        281731533
                    ]
                }, 
                {
                    "header": "Mapped Subread Length", 
                    "id": "mapping_stats.mapping_stats_table.mapped_subread_length", 
                    "values": [
                        1178, 
                        1178
                    ]
                }, 
                {
                    "header": "Mapped Subread Accuracy", 
                    "id": "mapping_stats.mapping_stats_table.mapped_subread_accuracy", 
                    "values": [
                        0.79500000000000004, 
                        0.79500000000000004
                    ]
                }
            ], 
            "id": "mapping_stats.mapping_stats_table", 
            "title": "Mapping Statistics Summary"
        }
    ]
}