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I: Running in no-targz mode
I: pbuilder: network access will be disabled during build
I: Current time: Wed Nov 25 12:48:20 CET 2020
I: pbuilder-time-stamp: 1606304900
I: copying local configuration
W: --override-config is not set; not updating apt.conf Read the manpage for details.
I: mounting /proc filesystem
I: mounting /sys filesystem
I: creating /{dev,run}/shm
I: mounting /dev/pts filesystem
I: redirecting /dev/ptmx to /dev/pts/ptmx
I: Mounting /home/michael/.ccache/
I: policy-rc.d already exists
I: Obtaining the cached apt archive contents
I: Setting up ccache
I: Copying source file
I: copying [/home/michael/debian/nipy_0.4.3~rc1-1.dsc]
I: copying [/home/michael/debian/nipy_0.4.3~rc1.orig.tar.gz]
I: copying [/home/michael/debian/nipy_0.4.3~rc1-1.debian.tar.xz]
I: Extracting source
gpgv: unknown type of key resource 'trustedkeys.kbx'
gpgv: keyblock resource '/tmp/dpkg-verify-sig.3tKR3S1l/trustedkeys.kbx': General error
gpgv: Signature made Wed Nov 25 11:41:23 2020 UTC
gpgv: using RSA key 724D609337113C710550D7473C26763F6C67E6E2
gpgv: Can't check signature: No public key
dpkg-source: warning: failed to verify signature on ./nipy_0.4.3~rc1-1.dsc
dpkg-source: info: extracting nipy in nipy-0.4.3~rc1
dpkg-source: info: unpacking nipy_0.4.3~rc1.orig.tar.gz
dpkg-source: info: unpacking nipy_0.4.3~rc1-1.debian.tar.xz
dpkg-source: info: using patch list from debian/patches/series
dpkg-source: info: applying local-mathjax.patch
dpkg-source: info: applying deb_no_texext
dpkg-source: info: applying deb_no_ipython_console_highlight
dpkg-source: info: applying python3
I: Not using root during the build.
I: Installing the build-deps
I: user script /var/cache/pbuilder/build/cow.3428128/tmp/hooks/D05deps starting
+ DEPSPATH=/
+ [ -n ]
+ set +ex
I: user script /var/cache/pbuilder/build/cow.3428128/tmp/hooks/D05deps finished
I: user script /var/cache/pbuilder/build/cow.3428128/tmp/hooks/D10-man-db starting
I: Preseed man-db/auto-update to false
I: user script /var/cache/pbuilder/build/cow.3428128/tmp/hooks/D10-man-db finished
I: -> Attempting to satisfy build-dependencies
Note, using file '/build/nipy_0.4.3~rc1-1.dsc' to get the build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following NEW packages will be installed:
autoconf automake autopoint autotools-dev bsdextrautils ca-certificates
cython3 cython3-dbg debhelper dh-autoreconf dh-python
dh-strip-nondeterminism docutils-common dvipng dwz file fontconfig
fontconfig-config fonts-lyx fonts-urw-base35 gettext gettext-base
ghostscript graphviz groff-base help2man intltool-debian libann0
libarchive-zip-perl libavahi-client3 libavahi-common-data libavahi-common3
libblas-dev libblas3 libbrotli1 libbsd0 libcairo2 libcdt5 libcgraph6
libcroco3 libcups2 libdatrie1 libdbus-1-3 libdebhelper-perl libelf1
libexpat1 libexpat1-dev libfile-stripnondeterminism-perl libfontconfig1
libfreetype6 libfribidi0 libgd3 libgfortran5 libglib2.0-0 libgraphite2-3
libgs9 libgs9-common libgts-0.7-5 libgvc6 libgvpr2 libharfbuzz0b libice6
libicu67 libidn11 libijs-0.35 libimagequant0 libjbig0 libjbig2dec0
libjpeg62-turbo libjs-jquery libjs-jquery-ui libjs-sphinxdoc
libjs-underscore libkpathsea6 liblab-gamut1 liblapack-dev liblapack3
liblbfgsb0 liblcms2-2 liblocale-gettext-perl libltdl7 libmagic-mgc libmagic1
libopenjp2-7 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper1
libpathplan4 libpipeline1 libpixman-1-0 libpng16-16 libptexenc1
libpython3-all-dbg libpython3-all-dev libpython3-dbg libpython3-dev
libpython3-stdlib libpython3.8 libpython3.8-dbg libpython3.8-dev
libpython3.8-minimal libpython3.8-stdlib libpython3.9 libpython3.9-dbg
libpython3.9-dev libpython3.9-minimal libpython3.9-stdlib libreadline8
libsigsegv2 libsm6 libsub-override-perl libsynctex2 libteckit0 libtexlua53
libtexluajit2 libthai-data libthai0 libtiff5 libtool libuchardet0 libwebp6
libwebpdemux2 libwebpmux3 libx11-6 libx11-data libxau6 libxaw7
libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxi6 libxml2 libxmu6
libxpm4 libxrender1 libxt6 libzzip-0-13 m4 mailcap man-db media-types
mime-support node-jquery openssl po-debconf poppler-data
python-babel-localedata python-matplotlib-data python3 python3-alabaster
python3-all python3-all-dbg python3-all-dev python3-babel python3-certifi
python3-chardet python3-cycler python3-dateutil python3-dbg
python3-decorator python3-dev python3-distutils python3-docutils
python3-idna python3-imagesize python3-jinja2 python3-kiwisolver
python3-lib2to3 python3-markupsafe python3-matplotlib python3-minimal
python3-mpmath python3-nibabel python3-nose python3-numpy python3-numpy-dbg
python3-numpydoc python3-packaging python3-pil python3-pkg-resources
python3-pygments python3-pyparsing python3-requests python3-roman
python3-scipy python3-scipy-dbg python3-setuptools python3-six
python3-snowballstemmer python3-sphinx python3-sympy python3-tz
python3-urllib3 python3.8 python3.8-dbg python3.8-dev python3.8-minimal
python3.9 python3.9-dbg python3.9-dev python3.9-minimal readline-common
sensible-utils sgml-base sphinx-common t1utils tex-common texlive-binaries
ttf-bitstream-vera tzdata ucf x11-common xml-core zlib1g-dev
0 upgraded, 217 newly installed, 0 to remove and 0 not upgraded.
Need to get 285 MB/394 MB of archives.
After this operation, 1486 MB of additional disk space will be used.
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Get:18 http://deb.debian.org/debian sid/main amd64 python3-all-dev amd64 3.9.0-3 [1076 B]
Get:19 http://deb.debian.org/debian sid/main amd64 python3-tz all 2020.4-2 [34.8 kB]
Get:20 http://deb.debian.org/debian sid/main amd64 python3-kiwisolver amd64 1.3.1-1 [286 kB]
Get:21 http://deb.debian.org/debian sid/main amd64 python3-mpmath all 1.1.0-2 [417 kB]
Get:22 http://deb.debian.org/debian sid/main amd64 python3-scipy amd64 1.5.4-1 [13.8 MB]
Get:23 http://deb.debian.org/debian sid/main amd64 python3-nibabel all 3.1.1-1 [2699 kB]
Get:24 http://deb.debian.org/debian sid/main amd64 python3-numpy-dbg amd64 1:1.19.4-1 [49.0 MB]
Get:25 http://deb.debian.org/debian sid/main amd64 python3-urllib3 all 1.25.11-1 [107 kB]
Get:26 http://deb.debian.org/debian sid/main amd64 python3-sphinx all 3.3.1-1 [537 kB]
Get:27 http://deb.debian.org/debian sid/main amd64 python3-numpydoc all 1.1.0-3 [40.0 kB]
Get:28 http://deb.debian.org/debian sid/main amd64 python3-scipy-dbg amd64 1.5.4-1 [125 MB]
Get:29 http://deb.debian.org/debian sid/main amd64 python3-sympy all 1.6.2-2 [3925 kB]
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Setting up libpython3.8-minimal:amd64 (3.8.6-1) ...
Setting up bsdextrautils (2.36.1-1) ...
update-alternatives: using /usr/bin/write.ul to provide /usr/bin/write (write) in auto mode
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invoke-rc.d: could not determine current runlevel
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Current default time zone: 'Etc/UTC'
Local time is now: Wed Nov 25 11:52:33 UTC 2020.
Universal Time is now: Wed Nov 25 11:52:33 UTC 2020.
Run 'dpkg-reconfigure tzdata' if you wish to change it.
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update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode
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Updating certificates in /etc/ssl/certs...
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Creating config file /etc/papersize with new version
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Not building database; man-db/auto-update is not 'true'.
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update-language: texlive-base not installed and configured, doing nothing!
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Regenerating fonts cache... done.
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Setting up python3-decorator (4.4.2-2) ...
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Setting up python3-pyparsing (2.4.7-1) ...
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update-alternatives: using /usr/bin/xdvi-xaw to provide /usr/bin/xdvi.bin (xdvi.bin) in auto mode
update-alternatives: using /usr/bin/bibtex.original to provide /usr/bin/bibtex (bibtex) in auto mode
Setting up python3-dateutil (2.8.1-4) ...
Setting up libpangoft2-1.0-0:amd64 (1.46.2-3) ...
Setting up python3-mpmath (1.1.0-2) ...
/usr/lib/python3/dist-packages/mpmath/ctx_mp_python.py:892: SyntaxWarning: "is" with a literal. Did you mean "=="?
if other is 0:
/usr/lib/python3/dist-packages/mpmath/ctx_mp_python.py:986: SyntaxWarning: "is" with a literal. Did you mean "=="?
if other is 0:
/usr/lib/python3/dist-packages/mpmath/ctx_mp_python.py:892: SyntaxWarning: "is" with a literal. Did you mean "=="?
if other is 0:
/usr/lib/python3/dist-packages/mpmath/ctx_mp_python.py:986: SyntaxWarning: "is" with a literal. Did you mean "=="?
if other is 0:
Setting up python3-lib2to3 (3.8.6-1) ...
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Setting up python3-imagesize (1.2.0-2) ...
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Setting up python3-pkg-resources (50.3.0-1) ...
Setting up python3-distutils (3.8.6-1) ...
Setting up dh-python (4.20201102) ...
Setting up python3-sympy (1.6.2-2) ...
Setting up libpython3-dev:amd64 (3.9.0-3) ...
Setting up python3-setuptools (50.3.0-1) ...
Setting up python3-babel (2.8.0+dfsg.1-4) ...
update-alternatives: using /usr/bin/pybabel-python3 to provide /usr/bin/pybabel (pybabel) in auto mode
Setting up python3-alabaster (0.7.8-1.1) ...
Setting up dvipng (1.15-1.1+b1) ...
Setting up python3-all (3.9.0-3) ...
Setting up python3-nose (1.3.7-7) ...
Setting up python3-pygments (2.7.1+dfsg-1) ...
Setting up python3-packaging (20.4-1) ...
Setting up python3-chardet (3.0.4-7) ...
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Setting up python3-requests (2.24.0+dfsg-1) ...
Setting up libgvc6 (2.42.2-4+b2) ...
Setting up python3-numpy (1:1.19.4-1) ...
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Setting up graphviz (2.42.2-4+b2) ...
Setting up python3-matplotlib (3.3.2-2) ...
Setting up python3-scipy (1.5.4-1) ...
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Setting up python3-nibabel (3.1.1-1) ...
/usr/lib/python3/dist-packages/nibabel/tests/test_scripts.py:140: SyntaxWarning: assertion is always true, perhaps remove parentheses?
assert ([l[ln:ln + len(i_str)] for l in stdout_lines] == [i_str] * 4, "Type sub-string didn't start with '%s'. "
/usr/lib/python3/dist-packages/nibabel/tests/test_scripts.py:140: SyntaxWarning: assertion is always true, perhaps remove parentheses?
assert ([l[ln:ln + len(i_str)] for l in stdout_lines] == [i_str] * 4, "Type sub-string didn't start with '%s'. "
Setting up python3-scipy-dbg:amd64 (1.5.4-1) ...
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Setting up dh-autoreconf (19) ...
Processing triggers for libc-bin (2.31-4) ...
Processing triggers for sgml-base (1.30) ...
Setting up docutils-common (0.16+dfsg-3) ...
Processing triggers for sgml-base (1.30) ...
Setting up python3-docutils (0.16+dfsg-3) ...
update-alternatives: using /usr/share/docutils/scripts/python3/rst-buildhtml to provide /usr/bin/rst-buildhtml (rst-buildhtml) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rst2html to provide /usr/bin/rst2html (rst2html) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rst2html4 to provide /usr/bin/rst2html4 (rst2html4) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rst2html5 to provide /usr/bin/rst2html5 (rst2html5) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rst2latex to provide /usr/bin/rst2latex (rst2latex) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rst2man to provide /usr/bin/rst2man (rst2man) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rst2odt to provide /usr/bin/rst2odt (rst2odt) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rst2odt_prepstyles to provide /usr/bin/rst2odt_prepstyles (rst2odt_prepstyles) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rst2pseudoxml to provide /usr/bin/rst2pseudoxml (rst2pseudoxml) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rst2s5 to provide /usr/bin/rst2s5 (rst2s5) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rst2xetex to provide /usr/bin/rst2xetex (rst2xetex) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rst2xml to provide /usr/bin/rst2xml (rst2xml) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rstpep2html to provide /usr/bin/rstpep2html (rstpep2html) in auto mode
Setting up python3-sphinx (3.3.1-1) ...
Setting up python3-numpydoc (1.1.0-3) ...
Processing triggers for ca-certificates (20200601) ...
Updating certificates in /etc/ssl/certs...
0 added, 0 removed; done.
Running hooks in /etc/ca-certificates/update.d...
done.
Processing triggers for tex-common (6.15) ...
update-language: texlive-base not installed and configured, doing nothing!
texlive-base is not ready, skipping fmtutil --all call
W: --force-yes is deprecated, use one of the options starting with --allow instead.
Reading package lists...
Building dependency tree...
Reading state information...
debian-ports-archive-keyring is already the newest version (2019.11.05).
eatmydata is already the newest version (105-9).
0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
W: --force-yes is deprecated, use one of the options starting with --allow instead.
I: Copying back the cached apt archive contents
I: new cache content 'dvipng_1.15-1.1+b1_amd64.deb' added
I: new cache content 'python3-tz_2020.4-2_all.deb' added
I: new cache content 'libpython3.9-dbg_3.9.0-5_amd64.deb' added
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I: new cache content 'poppler-data_0.4.10-1_all.deb' added
I: new cache content 'python3-scipy-dbg_1.5.4-1_amd64.deb' added
I: new cache content 'liblocale-gettext-perl_1.07-4+b1_amd64.deb' added
I: new cache content 'libpython3-all-dev_3.9.0-3_amd64.deb' added
I: new cache content 'libcups2_2.3.3-4_amd64.deb' added
I: new cache content 'python3-numpydoc_1.1.0-3_all.deb' added
I: new cache content 'python3-all-dev_3.9.0-3_amd64.deb' added
I: new cache content 'python3-all-dbg_3.9.0-3_amd64.deb' added
I: new cache content 'python3-dev_3.9.0-3_amd64.deb' added
I: new cache content 'python3-all_3.9.0-3_amd64.deb' added
I: new cache content 'python3-urllib3_1.25.11-1_all.deb' added
I: new cache content 'python3-sympy_1.6.2-2_all.deb' added
I: new cache content 'python3-nibabel_3.1.1-1_all.deb' added
I: new cache content 'python3-numpy-dbg_1%3a1.19.4-1_amd64.deb' added
I: new cache content 'libpython3-dbg_3.9.0-3_amd64.deb' added
I: new cache content 'libpython3-all-dbg_3.9.0-3_amd64.deb' added
I: new cache content 'python3-mpmath_1.1.0-2_all.deb' added
I: new cache content 'python3-kiwisolver_1.3.1-1_amd64.deb' added
I: new cache content 'python3-scipy_1.5.4-1_amd64.deb' added
I: new cache content 'python3-sphinx_3.3.1-1_all.deb' added
I: new cache content 'cython3-dbg_0.29.21-3_amd64.deb' added
I: new cache content 'python3.8-dbg_3.8.6-1_amd64.deb' added
I: Building the package
I: Running cd /build/nipy-0.4.3~rc1/ && env PATH="/usr/lib/ccache:/usr/sbin:/usr/bin:/sbin:/bin" HOME="/nonexistent" dpkg-buildpackage -us -uc 
dpkg-buildpackage: info: source package nipy
dpkg-buildpackage: info: source version 0.4.3~rc1-1
dpkg-buildpackage: info: source distribution unstable
dpkg-buildpackage: info: source changed by Michael R. Crusoe <[email protected]>
dpkg-source --before-build .
dpkg-buildpackage: info: host architecture amd64
dpkg-source: info: using options from nipy-0.4.3~rc1/debian/source/options: --extend-diff-ignore=(^|/)(nipy/COMMIT_INFO.txt|\.gitignore|_configtest.o.d)$
debian/rules clean
dh clean --buildsystem=pybuild --with=python3,sphinxdoc
dh_auto_clean -O--buildsystem=pybuild
install -d /build/nipy-0.4.3\~rc1/debian/.debhelper/generated/_source/home
pybuild --clean --test-nose -i python{version} -p "3.8 3.9"
I: pybuild base:232: python3.8 setup.py clean
lapack_opt_info:
lapack_mkl_info:
customize UnixCCompiler
libraries mkl_rt not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
openblas_lapack_info:
libraries openblas not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
openblas_clapack_info:
libraries openblas,lapack not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
flame_info:
libraries flame not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
atlas_3_10_threads_info:
Setting PTATLAS=ATLAS
libraries lapack_atlas not found in /usr/local/lib
libraries tatlas,tatlas not found in /usr/local/lib
libraries lapack_atlas not found in /usr/lib
libraries tatlas,tatlas not found in /usr/lib
libraries lapack_atlas not found in /usr/lib/x86_64-linux-gnu
libraries tatlas,tatlas not found in /usr/lib/x86_64-linux-gnu
<class 'numpy.distutils.system_info.atlas_3_10_threads_info'>
NOT AVAILABLE
atlas_3_10_info:
libraries lapack_atlas not found in /usr/local/lib
libraries satlas,satlas not found in /usr/local/lib
libraries lapack_atlas not found in /usr/lib
libraries satlas,satlas not found in /usr/lib
libraries lapack_atlas not found in /usr/lib/x86_64-linux-gnu
libraries satlas,satlas not found in /usr/lib/x86_64-linux-gnu
<class 'numpy.distutils.system_info.atlas_3_10_info'>
NOT AVAILABLE
atlas_threads_info:
Setting PTATLAS=ATLAS
libraries lapack_atlas not found in /usr/local/lib
libraries ptf77blas,ptcblas,atlas not found in /usr/local/lib
libraries lapack_atlas not found in /usr/lib
libraries ptf77blas,ptcblas,atlas not found in /usr/lib
libraries lapack_atlas not found in /usr/lib/x86_64-linux-gnu
libraries ptf77blas,ptcblas,atlas not found in /usr/lib/x86_64-linux-gnu
<class 'numpy.distutils.system_info.atlas_threads_info'>
NOT AVAILABLE
atlas_info:
libraries lapack_atlas not found in /usr/local/lib
libraries f77blas,cblas,atlas not found in /usr/local/lib
libraries lapack_atlas not found in /usr/lib
libraries f77blas,cblas,atlas not found in /usr/lib
libraries lapack_atlas not found in /usr/lib/x86_64-linux-gnu
libraries f77blas,cblas,atlas not found in /usr/lib/x86_64-linux-gnu
<class 'numpy.distutils.system_info.atlas_info'>
NOT AVAILABLE
accelerate_info:
NOT AVAILABLE
lapack_info:
FOUND:
libraries = ['lapack', 'lapack']
library_dirs = ['/usr/lib/x86_64-linux-gnu']
language = f77
blas_opt_info:
blas_mkl_info:
libraries mkl_rt not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
blis_info:
libraries blis not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
openblas_info:
libraries openblas not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
atlas_3_10_blas_threads_info:
Setting PTATLAS=ATLAS
libraries tatlas not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
atlas_3_10_blas_info:
libraries satlas not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
atlas_blas_threads_info:
Setting PTATLAS=ATLAS
libraries ptf77blas,ptcblas,atlas not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
atlas_blas_info:
libraries f77blas,cblas,atlas not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
blas_info:
C compiler: x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/build/nipy-0.4.3~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC
creating /tmp/tmpue5iwp8t/tmp
creating /tmp/tmpue5iwp8t/tmp/tmpue5iwp8t
compile options: '-I/usr/local/include -I/usr/include -c'
x86_64-linux-gnu-gcc: /tmp/tmpue5iwp8t/source.c
x86_64-linux-gnu-gcc -pthread /tmp/tmpue5iwp8t/tmp/tmpue5iwp8t/source.o -lblas -o /tmp/tmpue5iwp8t/a.out
FOUND:
libraries = ['blas', 'blas']
library_dirs = ['/usr/lib/x86_64-linux-gnu']
include_dirs = ['/usr/local/include', '/usr/include']
language = c
define_macros = [('HAVE_CBLAS', None)]
FOUND:
define_macros = [('NO_ATLAS_INFO', 1), ('HAVE_CBLAS', None)]
libraries = ['blas', 'blas']
library_dirs = ['/usr/lib/x86_64-linux-gnu']
include_dirs = ['/usr/local/include', '/usr/include']
language = c
FOUND:
libraries = ['lapack', 'lapack', 'blas', 'blas']
library_dirs = ['/usr/lib/x86_64-linux-gnu']
language = c
define_macros = [('NO_ATLAS_INFO', 1), ('HAVE_CBLAS', None)]
include_dirs = ['/usr/local/include', '/usr/include']
Building with (slow) Lapack lite distribution: set NIPY_EXTERNAL_LAPACK environment variable or use setup.cfg to enable link to optimized BLAS / LAPACK
LAPACK build options:
library_dirs: []
libraries: []
lapack_info: {'libraries': ['lapack', 'lapack', 'blas', 'blas'], 'library_dirs': ['/usr/lib/x86_64-linux-gnu'], 'language': 'c', 'define_macros': [('NO_ATLAS_INFO', 1), ('HAVE_CBLAS', None)], 'include_dirs': ['/usr/local/include', '/usr/include']}
running clean
removing '/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build' (and everything under it)
'build/bdist.linux-x86_64' does not exist -- can't clean it
'build/scripts.linux-x86_64-3.8' does not exist -- can't clean it
/usr/lib/python3/dist-packages/numpy/distutils/system_info.py:1914: UserWarning:
Optimized (vendor) Blas libraries are not found.
Falls back to netlib Blas library which has worse performance.
A better performance should be easily gained by switching
Blas library.
if self._calc_info(blas):
I: pybuild base:232: python3.9 setup.py clean
lapack_opt_info:
lapack_mkl_info:
customize UnixCCompiler
libraries mkl_rt not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
openblas_lapack_info:
libraries openblas not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
openblas_clapack_info:
libraries openblas,lapack not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
flame_info:
libraries flame not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
atlas_3_10_threads_info:
Setting PTATLAS=ATLAS
libraries lapack_atlas not found in /usr/local/lib
libraries tatlas,tatlas not found in /usr/local/lib
libraries lapack_atlas not found in /usr/lib
libraries tatlas,tatlas not found in /usr/lib
libraries lapack_atlas not found in /usr/lib/x86_64-linux-gnu
libraries tatlas,tatlas not found in /usr/lib/x86_64-linux-gnu
<class 'numpy.distutils.system_info.atlas_3_10_threads_info'>
NOT AVAILABLE
atlas_3_10_info:
libraries lapack_atlas not found in /usr/local/lib
libraries satlas,satlas not found in /usr/local/lib
libraries lapack_atlas not found in /usr/lib
libraries satlas,satlas not found in /usr/lib
libraries lapack_atlas not found in /usr/lib/x86_64-linux-gnu
libraries satlas,satlas not found in /usr/lib/x86_64-linux-gnu
<class 'numpy.distutils.system_info.atlas_3_10_info'>
NOT AVAILABLE
atlas_threads_info:
Setting PTATLAS=ATLAS
libraries lapack_atlas not found in /usr/local/lib
libraries ptf77blas,ptcblas,atlas not found in /usr/local/lib
libraries lapack_atlas not found in /usr/lib
libraries ptf77blas,ptcblas,atlas not found in /usr/lib
libraries lapack_atlas not found in /usr/lib/x86_64-linux-gnu
libraries ptf77blas,ptcblas,atlas not found in /usr/lib/x86_64-linux-gnu
<class 'numpy.distutils.system_info.atlas_threads_info'>
NOT AVAILABLE
atlas_info:
libraries lapack_atlas not found in /usr/local/lib
libraries f77blas,cblas,atlas not found in /usr/local/lib
libraries lapack_atlas not found in /usr/lib
libraries f77blas,cblas,atlas not found in /usr/lib
libraries lapack_atlas not found in /usr/lib/x86_64-linux-gnu
libraries f77blas,cblas,atlas not found in /usr/lib/x86_64-linux-gnu
<class 'numpy.distutils.system_info.atlas_info'>
NOT AVAILABLE
accelerate_info:
NOT AVAILABLE
lapack_info:
FOUND:
libraries = ['lapack', 'lapack']
library_dirs = ['/usr/lib/x86_64-linux-gnu']
language = f77
blas_opt_info:
blas_mkl_info:
libraries mkl_rt not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
blis_info:
libraries blis not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
openblas_info:
libraries openblas not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
atlas_3_10_blas_threads_info:
Setting PTATLAS=ATLAS
libraries tatlas not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
atlas_3_10_blas_info:
libraries satlas not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
atlas_blas_threads_info:
Setting PTATLAS=ATLAS
libraries ptf77blas,ptcblas,atlas not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
atlas_blas_info:
libraries f77blas,cblas,atlas not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
/usr/lib/python3/dist-packages/numpy/distutils/system_info.py:1914: UserWarning:
Optimized (vendor) Blas libraries are not found.
Falls back to netlib Blas library which has worse performance.
A better performance should be easily gained by switching
Blas library.
if self._calc_info(blas):
blas_info:
C compiler: x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/build/nipy-0.4.3~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC
creating /tmp/tmp14igpqib/tmp
creating /tmp/tmp14igpqib/tmp/tmp14igpqib
compile options: '-I/usr/local/include -I/usr/include -c'
x86_64-linux-gnu-gcc: /tmp/tmp14igpqib/source.c
x86_64-linux-gnu-gcc -pthread /tmp/tmp14igpqib/tmp/tmp14igpqib/source.o -lblas -o /tmp/tmp14igpqib/a.out
FOUND:
libraries = ['blas', 'blas']
library_dirs = ['/usr/lib/x86_64-linux-gnu']
include_dirs = ['/usr/local/include', '/usr/include']
language = c
define_macros = [('HAVE_CBLAS', None)]
FOUND:
define_macros = [('NO_ATLAS_INFO', 1), ('HAVE_CBLAS', None)]
libraries = ['blas', 'blas']
library_dirs = ['/usr/lib/x86_64-linux-gnu']
include_dirs = ['/usr/local/include', '/usr/include']
language = c
FOUND:
libraries = ['lapack', 'lapack', 'blas', 'blas']
library_dirs = ['/usr/lib/x86_64-linux-gnu']
language = c
define_macros = [('NO_ATLAS_INFO', 1), ('HAVE_CBLAS', None)]
include_dirs = ['/usr/local/include', '/usr/include']
Building with (slow) Lapack lite distribution: set NIPY_EXTERNAL_LAPACK environment variable or use setup.cfg to enable link to optimized BLAS / LAPACK
LAPACK build options:
library_dirs: []
libraries: []
lapack_info: {'libraries': ['lapack', 'lapack', 'blas', 'blas'], 'library_dirs': ['/usr/lib/x86_64-linux-gnu'], 'language': 'c', 'define_macros': [('NO_ATLAS_INFO', 1), ('HAVE_CBLAS', None)], 'include_dirs': ['/usr/local/include', '/usr/include']}
running clean
removing '/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build' (and everything under it)
'build/bdist.linux-x86_64' does not exist -- can't clean it
'build/scripts.linux-x86_64-3.9' does not exist -- can't clean it
pybuild --clean --test-nose -i python{version}-dbg -p "3.8 3.9"
I: pybuild base:232: python3.8-dbg setup.py clean
lapack_opt_info:
lapack_mkl_info:
customize UnixCCompiler
libraries mkl_rt not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
openblas_lapack_info:
libraries openblas not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
openblas_clapack_info:
libraries openblas,lapack not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
flame_info:
libraries flame not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
atlas_3_10_threads_info:
Setting PTATLAS=ATLAS
libraries lapack_atlas not found in /usr/local/lib
libraries tatlas,tatlas not found in /usr/local/lib
libraries lapack_atlas not found in /usr/lib
libraries tatlas,tatlas not found in /usr/lib
libraries lapack_atlas not found in /usr/lib/x86_64-linux-gnu
libraries tatlas,tatlas not found in /usr/lib/x86_64-linux-gnu
<class 'numpy.distutils.system_info.atlas_3_10_threads_info'>
NOT AVAILABLE
atlas_3_10_info:
libraries lapack_atlas not found in /usr/local/lib
libraries satlas,satlas not found in /usr/local/lib
libraries lapack_atlas not found in /usr/lib
libraries satlas,satlas not found in /usr/lib
libraries lapack_atlas not found in /usr/lib/x86_64-linux-gnu
libraries satlas,satlas not found in /usr/lib/x86_64-linux-gnu
<class 'numpy.distutils.system_info.atlas_3_10_info'>
NOT AVAILABLE
atlas_threads_info:
Setting PTATLAS=ATLAS
libraries lapack_atlas not found in /usr/local/lib
libraries ptf77blas,ptcblas,atlas not found in /usr/local/lib
libraries lapack_atlas not found in /usr/lib
libraries ptf77blas,ptcblas,atlas not found in /usr/lib
libraries lapack_atlas not found in /usr/lib/x86_64-linux-gnu
libraries ptf77blas,ptcblas,atlas not found in /usr/lib/x86_64-linux-gnu
<class 'numpy.distutils.system_info.atlas_threads_info'>
NOT AVAILABLE
atlas_info:
libraries lapack_atlas not found in /usr/local/lib
libraries f77blas,cblas,atlas not found in /usr/local/lib
libraries lapack_atlas not found in /usr/lib
libraries f77blas,cblas,atlas not found in /usr/lib
libraries lapack_atlas not found in /usr/lib/x86_64-linux-gnu
libraries f77blas,cblas,atlas not found in /usr/lib/x86_64-linux-gnu
<class 'numpy.distutils.system_info.atlas_info'>
NOT AVAILABLE
accelerate_info:
NOT AVAILABLE
lapack_info:
FOUND:
libraries = ['lapack', 'lapack']
library_dirs = ['/usr/lib/x86_64-linux-gnu']
language = f77
blas_opt_info:
blas_mkl_info:
libraries mkl_rt not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
blis_info:
libraries blis not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
openblas_info:
libraries openblas not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
atlas_3_10_blas_threads_info:
Setting PTATLAS=ATLAS
libraries tatlas not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
atlas_3_10_blas_info:
libraries satlas not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
atlas_blas_threads_info:
Setting PTATLAS=ATLAS
libraries ptf77blas,ptcblas,atlas not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
atlas_blas_info:
libraries f77blas,cblas,atlas not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
blas_info:
C compiler: x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -g -Og -Wall -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/build/nipy-0.4.3~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC
creating /tmp/tmp9snxdrtu/tmp
creating /tmp/tmp9snxdrtu/tmp/tmp9snxdrtu
compile options: '-I/usr/local/include -I/usr/include -c'
x86_64-linux-gnu-gcc: /tmp/tmp9snxdrtu/source.c
x86_64-linux-gnu-gcc -pthread /tmp/tmp9snxdrtu/tmp/tmp9snxdrtu/source.o -lblas -o /tmp/tmp9snxdrtu/a.out
FOUND:
libraries = ['blas', 'blas']
library_dirs = ['/usr/lib/x86_64-linux-gnu']
include_dirs = ['/usr/local/include', '/usr/include']
language = c
define_macros = [('HAVE_CBLAS', None)]
FOUND:
define_macros = [('NO_ATLAS_INFO', 1), ('HAVE_CBLAS', None)]
libraries = ['blas', 'blas']
library_dirs = ['/usr/lib/x86_64-linux-gnu']
include_dirs = ['/usr/local/include', '/usr/include']
language = c
FOUND:
libraries = ['lapack', 'lapack', 'blas', 'blas']
library_dirs = ['/usr/lib/x86_64-linux-gnu']
language = c
define_macros = [('NO_ATLAS_INFO', 1), ('HAVE_CBLAS', None)]
include_dirs = ['/usr/local/include', '/usr/include']
Building with (slow) Lapack lite distribution: set NIPY_EXTERNAL_LAPACK environment variable or use setup.cfg to enable link to optimized BLAS / LAPACK
LAPACK build options:
library_dirs: []
libraries: []
lapack_info: {'libraries': ['lapack', 'lapack', 'blas', 'blas'], 'library_dirs': ['/usr/lib/x86_64-linux-gnu'], 'language': 'c', 'define_macros': [('NO_ATLAS_INFO', 1), ('HAVE_CBLAS', None)], 'include_dirs': ['/usr/local/include', '/usr/include']}
running clean
removing '/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build' (and everything under it)
'build/bdist.linux-x86_64' does not exist -- can't clean it
'build/scripts.linux-x86_64-3.8' does not exist -- can't clean it
/build/nipy-0.4.3~rc1/setup_helpers.py:51: ResourceWarning: unclosed file <_io.TextIOWrapper name='nipy/info.py' mode='rt' encoding='UTF-8'>
exec(open(_info_fname, 'rt').read(), {}, INFO_VARS)
ResourceWarning: Enable tracemalloc to get the object allocation traceback
/usr/lib/python3/dist-packages/numpy/distutils/system_info.py:1914: UserWarning:
Optimized (vendor) Blas libraries are not found.
Falls back to netlib Blas library which has worse performance.
A better performance should be easily gained by switching
Blas library.
if self._calc_info(blas):
I: pybuild base:232: python3.9-dbg setup.py clean
/build/nipy-0.4.3~rc1/setup_helpers.py:51: ResourceWarning: unclosed file <_io.TextIOWrapper name='nipy/info.py' mode='rt' encoding='UTF-8'>
exec(open(_info_fname, 'rt').read(), {}, INFO_VARS)
ResourceWarning: Enable tracemalloc to get the object allocation traceback
lapack_opt_info:
lapack_mkl_info:
customize UnixCCompiler
libraries mkl_rt not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
openblas_lapack_info:
libraries openblas not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
openblas_clapack_info:
libraries openblas,lapack not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
flame_info:
libraries flame not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
atlas_3_10_threads_info:
Setting PTATLAS=ATLAS
libraries lapack_atlas not found in /usr/local/lib
libraries tatlas,tatlas not found in /usr/local/lib
libraries lapack_atlas not found in /usr/lib
libraries tatlas,tatlas not found in /usr/lib
libraries lapack_atlas not found in /usr/lib/x86_64-linux-gnu
libraries tatlas,tatlas not found in /usr/lib/x86_64-linux-gnu
<class 'numpy.distutils.system_info.atlas_3_10_threads_info'>
NOT AVAILABLE
atlas_3_10_info:
libraries lapack_atlas not found in /usr/local/lib
libraries satlas,satlas not found in /usr/local/lib
libraries lapack_atlas not found in /usr/lib
libraries satlas,satlas not found in /usr/lib
libraries lapack_atlas not found in /usr/lib/x86_64-linux-gnu
libraries satlas,satlas not found in /usr/lib/x86_64-linux-gnu
<class 'numpy.distutils.system_info.atlas_3_10_info'>
NOT AVAILABLE
atlas_threads_info:
Setting PTATLAS=ATLAS
libraries lapack_atlas not found in /usr/local/lib
libraries ptf77blas,ptcblas,atlas not found in /usr/local/lib
libraries lapack_atlas not found in /usr/lib
libraries ptf77blas,ptcblas,atlas not found in /usr/lib
libraries lapack_atlas not found in /usr/lib/x86_64-linux-gnu
libraries ptf77blas,ptcblas,atlas not found in /usr/lib/x86_64-linux-gnu
<class 'numpy.distutils.system_info.atlas_threads_info'>
NOT AVAILABLE
atlas_info:
libraries lapack_atlas not found in /usr/local/lib
libraries f77blas,cblas,atlas not found in /usr/local/lib
libraries lapack_atlas not found in /usr/lib
libraries f77blas,cblas,atlas not found in /usr/lib
libraries lapack_atlas not found in /usr/lib/x86_64-linux-gnu
libraries f77blas,cblas,atlas not found in /usr/lib/x86_64-linux-gnu
<class 'numpy.distutils.system_info.atlas_info'>
NOT AVAILABLE
accelerate_info:
NOT AVAILABLE
lapack_info:
FOUND:
libraries = ['lapack', 'lapack']
library_dirs = ['/usr/lib/x86_64-linux-gnu']
language = f77
blas_opt_info:
blas_mkl_info:
libraries mkl_rt not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
blis_info:
libraries blis not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
openblas_info:
libraries openblas not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
atlas_3_10_blas_threads_info:
Setting PTATLAS=ATLAS
libraries tatlas not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
atlas_3_10_blas_info:
libraries satlas not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
atlas_blas_threads_info:
Setting PTATLAS=ATLAS
libraries ptf77blas,ptcblas,atlas not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
atlas_blas_info:
libraries f77blas,cblas,atlas not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
/usr/lib/python3/dist-packages/numpy/distutils/system_info.py:1914: UserWarning:
Optimized (vendor) Blas libraries are not found.
Falls back to netlib Blas library which has worse performance.
A better performance should be easily gained by switching
Blas library.
if self._calc_info(blas):
blas_info:
C compiler: x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -g -Og -Wall -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/build/nipy-0.4.3~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC
creating /tmp/tmpknpyyb6p/tmp
creating /tmp/tmpknpyyb6p/tmp/tmpknpyyb6p
compile options: '-I/usr/local/include -I/usr/include -c'
x86_64-linux-gnu-gcc: /tmp/tmpknpyyb6p/source.c
x86_64-linux-gnu-gcc -pthread /tmp/tmpknpyyb6p/tmp/tmpknpyyb6p/source.o -lblas -o /tmp/tmpknpyyb6p/a.out
FOUND:
libraries = ['blas', 'blas']
library_dirs = ['/usr/lib/x86_64-linux-gnu']
include_dirs = ['/usr/local/include', '/usr/include']
language = c
define_macros = [('HAVE_CBLAS', None)]
FOUND:
define_macros = [('NO_ATLAS_INFO', 1), ('HAVE_CBLAS', None)]
libraries = ['blas', 'blas']
library_dirs = ['/usr/lib/x86_64-linux-gnu']
include_dirs = ['/usr/local/include', '/usr/include']
language = c
FOUND:
libraries = ['lapack', 'lapack', 'blas', 'blas']
library_dirs = ['/usr/lib/x86_64-linux-gnu']
language = c
define_macros = [('NO_ATLAS_INFO', 1), ('HAVE_CBLAS', None)]
include_dirs = ['/usr/local/include', '/usr/include']
Building with (slow) Lapack lite distribution: set NIPY_EXTERNAL_LAPACK environment variable or use setup.cfg to enable link to optimized BLAS / LAPACK
LAPACK build options:
library_dirs: []
libraries: []
lapack_info: {'libraries': ['lapack', 'lapack', 'blas', 'blas'], 'library_dirs': ['/usr/lib/x86_64-linux-gnu'], 'language': 'c', 'define_macros': [('NO_ATLAS_INFO', 1), ('HAVE_CBLAS', None)], 'include_dirs': ['/usr/local/include', '/usr/include']}
running clean
removing '/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build' (and everything under it)
'build/bdist.linux-x86_64' does not exist -- can't clean it
'build/scripts.linux-x86_64-3.9' does not exist -- can't clean it
rm -rf .pybuild/
find . -name \*.pyc -exec rm {} \;
dh_autoreconf_clean -O--buildsystem=pybuild
debian/rules override_dh_clean
make[1]: Entering directory '/build/nipy-0.4.3~rc1'
: # I: Custom cleaning
rm -rf build nipy/neurospin/__config__.py
/usr/bin/make -C doc clean
make[2]: Entering directory '/build/nipy-0.4.3~rc1/doc'
rm -rf build/* dist/* *~ api/generated labs/generated
rm -f manual
make[2]: Leaving directory '/build/nipy-0.4.3~rc1/doc'
dh_clean
rm -f debian/debhelper-build-stamp
rm -rf debian/.debhelper/
rm -f -- debian/python3-nipy.substvars debian/python3-nipy-lib.substvars debian/python3-nipy-lib-dbg.substvars debian/python-nipy-doc.substvars debian/files
rm -fr -- debian/python3-nipy/ debian/tmp/ debian/python3-nipy-lib/ debian/python3-nipy-lib-dbg/ debian/python-nipy-doc/
find . \( \( \
\( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o -type f -a \
\( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \
-o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \
-o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \
-o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \
\) -exec rm -f {} + \) -o \
\( -type d -a -name autom4te.cache -prune -exec rm -rf {} + \) \)
make[1]: Leaving directory '/build/nipy-0.4.3~rc1'
dpkg-source -b .
dpkg-source: info: using options from nipy-0.4.3~rc1/debian/source/options: --extend-diff-ignore=(^|/)(nipy/COMMIT_INFO.txt|\.gitignore|_configtest.o.d)$
dpkg-source: info: using source format '3.0 (quilt)'
dpkg-source: info: building nipy using existing ./nipy_0.4.3~rc1.orig.tar.gz
dpkg-source: info: using patch list from debian/patches/series
dpkg-source: info: building nipy in nipy_0.4.3~rc1-1.debian.tar.xz
dpkg-source: info: building nipy in nipy_0.4.3~rc1-1.dsc
debian/rules binary
dh binary --buildsystem=pybuild --with=python3,sphinxdoc
dh_update_autotools_config -O--buildsystem=pybuild
dh_autoreconf -O--buildsystem=pybuild
dh_auto_configure -O--buildsystem=pybuild
install -d /build/nipy-0.4.3\~rc1/debian/.debhelper/generated/_source/home
pybuild --configure --test-nose -i python{version} -p "3.8 3.9"
I: pybuild base:232: python3.8 setup.py config
lapack_opt_info:
lapack_mkl_info:
customize UnixCCompiler
libraries mkl_rt not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
openblas_lapack_info:
libraries openblas not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
openblas_clapack_info:
libraries openblas,lapack not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
flame_info:
libraries flame not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
atlas_3_10_threads_info:
Setting PTATLAS=ATLAS
libraries lapack_atlas not found in /usr/local/lib
libraries tatlas,tatlas not found in /usr/local/lib
libraries lapack_atlas not found in /usr/lib
libraries tatlas,tatlas not found in /usr/lib
libraries lapack_atlas not found in /usr/lib/x86_64-linux-gnu
libraries tatlas,tatlas not found in /usr/lib/x86_64-linux-gnu
<class 'numpy.distutils.system_info.atlas_3_10_threads_info'>
NOT AVAILABLE
atlas_3_10_info:
libraries lapack_atlas not found in /usr/local/lib
libraries satlas,satlas not found in /usr/local/lib
libraries lapack_atlas not found in /usr/lib
libraries satlas,satlas not found in /usr/lib
libraries lapack_atlas not found in /usr/lib/x86_64-linux-gnu
libraries satlas,satlas not found in /usr/lib/x86_64-linux-gnu
<class 'numpy.distutils.system_info.atlas_3_10_info'>
NOT AVAILABLE
atlas_threads_info:
Setting PTATLAS=ATLAS
libraries lapack_atlas not found in /usr/local/lib
libraries ptf77blas,ptcblas,atlas not found in /usr/local/lib
libraries lapack_atlas not found in /usr/lib
libraries ptf77blas,ptcblas,atlas not found in /usr/lib
libraries lapack_atlas not found in /usr/lib/x86_64-linux-gnu
libraries ptf77blas,ptcblas,atlas not found in /usr/lib/x86_64-linux-gnu
<class 'numpy.distutils.system_info.atlas_threads_info'>
NOT AVAILABLE
atlas_info:
libraries lapack_atlas not found in /usr/local/lib
libraries f77blas,cblas,atlas not found in /usr/local/lib
libraries lapack_atlas not found in /usr/lib
libraries f77blas,cblas,atlas not found in /usr/lib
libraries lapack_atlas not found in /usr/lib/x86_64-linux-gnu
libraries f77blas,cblas,atlas not found in /usr/lib/x86_64-linux-gnu
<class 'numpy.distutils.system_info.atlas_info'>
NOT AVAILABLE
accelerate_info:
NOT AVAILABLE
lapack_info:
FOUND:
libraries = ['lapack', 'lapack']
library_dirs = ['/usr/lib/x86_64-linux-gnu']
language = f77
blas_opt_info:
blas_mkl_info:
libraries mkl_rt not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
blis_info:
libraries blis not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
openblas_info:
libraries openblas not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
atlas_3_10_blas_threads_info:
Setting PTATLAS=ATLAS
libraries tatlas not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
atlas_3_10_blas_info:
libraries satlas not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
atlas_blas_threads_info:
Setting PTATLAS=ATLAS
libraries ptf77blas,ptcblas,atlas not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
atlas_blas_info:
libraries f77blas,cblas,atlas not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
blas_info:
C compiler: x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/build/nipy-0.4.3~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC
creating /tmp/tmpbiyzko0z/tmp
creating /tmp/tmpbiyzko0z/tmp/tmpbiyzko0z
compile options: '-I/usr/local/include -I/usr/include -c'
x86_64-linux-gnu-gcc: /tmp/tmpbiyzko0z/source.c
x86_64-linux-gnu-gcc -pthread /tmp/tmpbiyzko0z/tmp/tmpbiyzko0z/source.o -lblas -o /tmp/tmpbiyzko0z/a.out
FOUND:
libraries = ['blas', 'blas']
library_dirs = ['/usr/lib/x86_64-linux-gnu']
include_dirs = ['/usr/local/include', '/usr/include']
language = c
define_macros = [('HAVE_CBLAS', None)]
FOUND:
define_macros = [('NO_ATLAS_INFO', 1), ('HAVE_CBLAS', None)]
libraries = ['blas', 'blas']
library_dirs = ['/usr/lib/x86_64-linux-gnu']
include_dirs = ['/usr/local/include', '/usr/include']
language = c
FOUND:
libraries = ['lapack', 'lapack', 'blas', 'blas']
library_dirs = ['/usr/lib/x86_64-linux-gnu']
language = c
define_macros = [('NO_ATLAS_INFO', 1), ('HAVE_CBLAS', None)]
include_dirs = ['/usr/local/include', '/usr/include']
Building with (slow) Lapack lite distribution: set NIPY_EXTERNAL_LAPACK environment variable or use setup.cfg to enable link to optimized BLAS / LAPACK
LAPACK build options:
library_dirs: []
libraries: []
lapack_info: {'libraries': ['lapack', 'lapack', 'blas', 'blas'], 'library_dirs': ['/usr/lib/x86_64-linux-gnu'], 'language': 'c', 'define_macros': [('NO_ATLAS_INFO', 1), ('HAVE_CBLAS', None)], 'include_dirs': ['/usr/local/include', '/usr/include']}
running config
/usr/lib/python3/dist-packages/numpy/distutils/system_info.py:1914: UserWarning:
Optimized (vendor) Blas libraries are not found.
Falls back to netlib Blas library which has worse performance.
A better performance should be easily gained by switching
Blas library.
if self._calc_info(blas):
I: pybuild base:232: python3.9 setup.py config
lapack_opt_info:
lapack_mkl_info:
customize UnixCCompiler
libraries mkl_rt not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
openblas_lapack_info:
libraries openblas not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
openblas_clapack_info:
libraries openblas,lapack not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
flame_info:
libraries flame not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
atlas_3_10_threads_info:
Setting PTATLAS=ATLAS
libraries lapack_atlas not found in /usr/local/lib
libraries tatlas,tatlas not found in /usr/local/lib
libraries lapack_atlas not found in /usr/lib
libraries tatlas,tatlas not found in /usr/lib
libraries lapack_atlas not found in /usr/lib/x86_64-linux-gnu
libraries tatlas,tatlas not found in /usr/lib/x86_64-linux-gnu
<class 'numpy.distutils.system_info.atlas_3_10_threads_info'>
NOT AVAILABLE
atlas_3_10_info:
libraries lapack_atlas not found in /usr/local/lib
libraries satlas,satlas not found in /usr/local/lib
libraries lapack_atlas not found in /usr/lib
libraries satlas,satlas not found in /usr/lib
libraries lapack_atlas not found in /usr/lib/x86_64-linux-gnu
libraries satlas,satlas not found in /usr/lib/x86_64-linux-gnu
<class 'numpy.distutils.system_info.atlas_3_10_info'>
NOT AVAILABLE
atlas_threads_info:
Setting PTATLAS=ATLAS
libraries lapack_atlas not found in /usr/local/lib
libraries ptf77blas,ptcblas,atlas not found in /usr/local/lib
libraries lapack_atlas not found in /usr/lib
libraries ptf77blas,ptcblas,atlas not found in /usr/lib
libraries lapack_atlas not found in /usr/lib/x86_64-linux-gnu
libraries ptf77blas,ptcblas,atlas not found in /usr/lib/x86_64-linux-gnu
<class 'numpy.distutils.system_info.atlas_threads_info'>
NOT AVAILABLE
atlas_info:
libraries lapack_atlas not found in /usr/local/lib
libraries f77blas,cblas,atlas not found in /usr/local/lib
libraries lapack_atlas not found in /usr/lib
libraries f77blas,cblas,atlas not found in /usr/lib
libraries lapack_atlas not found in /usr/lib/x86_64-linux-gnu
libraries f77blas,cblas,atlas not found in /usr/lib/x86_64-linux-gnu
<class 'numpy.distutils.system_info.atlas_info'>
NOT AVAILABLE
accelerate_info:
NOT AVAILABLE
lapack_info:
FOUND:
libraries = ['lapack', 'lapack']
library_dirs = ['/usr/lib/x86_64-linux-gnu']
language = f77
blas_opt_info:
blas_mkl_info:
libraries mkl_rt not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
blis_info:
libraries blis not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
openblas_info:
libraries openblas not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
atlas_3_10_blas_threads_info:
Setting PTATLAS=ATLAS
libraries tatlas not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
atlas_3_10_blas_info:
libraries satlas not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
atlas_blas_threads_info:
Setting PTATLAS=ATLAS
libraries ptf77blas,ptcblas,atlas not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
atlas_blas_info:
libraries f77blas,cblas,atlas not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
/usr/lib/python3/dist-packages/numpy/distutils/system_info.py:1914: UserWarning:
Optimized (vendor) Blas libraries are not found.
Falls back to netlib Blas library which has worse performance.
A better performance should be easily gained by switching
Blas library.
if self._calc_info(blas):
blas_info:
C compiler: x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/build/nipy-0.4.3~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC
creating /tmp/tmpzb2c7_sv/tmp
creating /tmp/tmpzb2c7_sv/tmp/tmpzb2c7_sv
compile options: '-I/usr/local/include -I/usr/include -c'
x86_64-linux-gnu-gcc: /tmp/tmpzb2c7_sv/source.c
x86_64-linux-gnu-gcc -pthread /tmp/tmpzb2c7_sv/tmp/tmpzb2c7_sv/source.o -lblas -o /tmp/tmpzb2c7_sv/a.out
FOUND:
libraries = ['blas', 'blas']
library_dirs = ['/usr/lib/x86_64-linux-gnu']
include_dirs = ['/usr/local/include', '/usr/include']
language = c
define_macros = [('HAVE_CBLAS', None)]
FOUND:
define_macros = [('NO_ATLAS_INFO', 1), ('HAVE_CBLAS', None)]
libraries = ['blas', 'blas']
library_dirs = ['/usr/lib/x86_64-linux-gnu']
include_dirs = ['/usr/local/include', '/usr/include']
language = c
FOUND:
libraries = ['lapack', 'lapack', 'blas', 'blas']
library_dirs = ['/usr/lib/x86_64-linux-gnu']
language = c
define_macros = [('NO_ATLAS_INFO', 1), ('HAVE_CBLAS', None)]
include_dirs = ['/usr/local/include', '/usr/include']
Building with (slow) Lapack lite distribution: set NIPY_EXTERNAL_LAPACK environment variable or use setup.cfg to enable link to optimized BLAS / LAPACK
LAPACK build options:
library_dirs: []
libraries: []
lapack_info: {'libraries': ['lapack', 'lapack', 'blas', 'blas'], 'library_dirs': ['/usr/lib/x86_64-linux-gnu'], 'language': 'c', 'define_macros': [('NO_ATLAS_INFO', 1), ('HAVE_CBLAS', None)], 'include_dirs': ['/usr/local/include', '/usr/include']}
running config
pybuild --configure --test-nose -i python{version}-dbg -p "3.8 3.9"
I: pybuild base:232: python3.8-dbg setup.py config
lapack_opt_info:
lapack_mkl_info:
customize UnixCCompiler
libraries mkl_rt not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
openblas_lapack_info:
libraries openblas not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
openblas_clapack_info:
libraries openblas,lapack not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
flame_info:
libraries flame not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
atlas_3_10_threads_info:
Setting PTATLAS=ATLAS
libraries lapack_atlas not found in /usr/local/lib
libraries tatlas,tatlas not found in /usr/local/lib
libraries lapack_atlas not found in /usr/lib
libraries tatlas,tatlas not found in /usr/lib
libraries lapack_atlas not found in /usr/lib/x86_64-linux-gnu
libraries tatlas,tatlas not found in /usr/lib/x86_64-linux-gnu
<class 'numpy.distutils.system_info.atlas_3_10_threads_info'>
NOT AVAILABLE
atlas_3_10_info:
libraries lapack_atlas not found in /usr/local/lib
libraries satlas,satlas not found in /usr/local/lib
libraries lapack_atlas not found in /usr/lib
libraries satlas,satlas not found in /usr/lib
libraries lapack_atlas not found in /usr/lib/x86_64-linux-gnu
libraries satlas,satlas not found in /usr/lib/x86_64-linux-gnu
<class 'numpy.distutils.system_info.atlas_3_10_info'>
NOT AVAILABLE
atlas_threads_info:
Setting PTATLAS=ATLAS
libraries lapack_atlas not found in /usr/local/lib
libraries ptf77blas,ptcblas,atlas not found in /usr/local/lib
libraries lapack_atlas not found in /usr/lib
libraries ptf77blas,ptcblas,atlas not found in /usr/lib
libraries lapack_atlas not found in /usr/lib/x86_64-linux-gnu
libraries ptf77blas,ptcblas,atlas not found in /usr/lib/x86_64-linux-gnu
<class 'numpy.distutils.system_info.atlas_threads_info'>
NOT AVAILABLE
atlas_info:
libraries lapack_atlas not found in /usr/local/lib
libraries f77blas,cblas,atlas not found in /usr/local/lib
libraries lapack_atlas not found in /usr/lib
libraries f77blas,cblas,atlas not found in /usr/lib
libraries lapack_atlas not found in /usr/lib/x86_64-linux-gnu
libraries f77blas,cblas,atlas not found in /usr/lib/x86_64-linux-gnu
<class 'numpy.distutils.system_info.atlas_info'>
NOT AVAILABLE
accelerate_info:
NOT AVAILABLE
lapack_info:
FOUND:
libraries = ['lapack', 'lapack']
library_dirs = ['/usr/lib/x86_64-linux-gnu']
language = f77
blas_opt_info:
blas_mkl_info:
libraries mkl_rt not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
blis_info:
libraries blis not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
openblas_info:
libraries openblas not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
atlas_3_10_blas_threads_info:
Setting PTATLAS=ATLAS
libraries tatlas not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
atlas_3_10_blas_info:
libraries satlas not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
atlas_blas_threads_info:
Setting PTATLAS=ATLAS
libraries ptf77blas,ptcblas,atlas not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
atlas_blas_info:
libraries f77blas,cblas,atlas not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
blas_info:
C compiler: x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -g -Og -Wall -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/build/nipy-0.4.3~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC
creating /tmp/tmpk4ygy1yu/tmp
creating /tmp/tmpk4ygy1yu/tmp/tmpk4ygy1yu
compile options: '-I/usr/local/include -I/usr/include -c'
x86_64-linux-gnu-gcc: /tmp/tmpk4ygy1yu/source.c
x86_64-linux-gnu-gcc -pthread /tmp/tmpk4ygy1yu/tmp/tmpk4ygy1yu/source.o -lblas -o /tmp/tmpk4ygy1yu/a.out
FOUND:
libraries = ['blas', 'blas']
library_dirs = ['/usr/lib/x86_64-linux-gnu']
include_dirs = ['/usr/local/include', '/usr/include']
language = c
define_macros = [('HAVE_CBLAS', None)]
FOUND:
define_macros = [('NO_ATLAS_INFO', 1), ('HAVE_CBLAS', None)]
libraries = ['blas', 'blas']
library_dirs = ['/usr/lib/x86_64-linux-gnu']
include_dirs = ['/usr/local/include', '/usr/include']
language = c
FOUND:
libraries = ['lapack', 'lapack', 'blas', 'blas']
library_dirs = ['/usr/lib/x86_64-linux-gnu']
language = c
define_macros = [('NO_ATLAS_INFO', 1), ('HAVE_CBLAS', None)]
include_dirs = ['/usr/local/include', '/usr/include']
Building with (slow) Lapack lite distribution: set NIPY_EXTERNAL_LAPACK environment variable or use setup.cfg to enable link to optimized BLAS / LAPACK
LAPACK build options:
library_dirs: []
libraries: []
lapack_info: {'libraries': ['lapack', 'lapack', 'blas', 'blas'], 'library_dirs': ['/usr/lib/x86_64-linux-gnu'], 'language': 'c', 'define_macros': [('NO_ATLAS_INFO', 1), ('HAVE_CBLAS', None)], 'include_dirs': ['/usr/local/include', '/usr/include']}
running config
/build/nipy-0.4.3~rc1/setup_helpers.py:51: ResourceWarning: unclosed file <_io.TextIOWrapper name='nipy/info.py' mode='rt' encoding='UTF-8'>
exec(open(_info_fname, 'rt').read(), {}, INFO_VARS)
ResourceWarning: Enable tracemalloc to get the object allocation traceback
/usr/lib/python3/dist-packages/numpy/distutils/system_info.py:1914: UserWarning:
Optimized (vendor) Blas libraries are not found.
Falls back to netlib Blas library which has worse performance.
A better performance should be easily gained by switching
Blas library.
if self._calc_info(blas):
I: pybuild base:232: python3.9-dbg setup.py config
/build/nipy-0.4.3~rc1/setup_helpers.py:51: ResourceWarning: unclosed file <_io.TextIOWrapper name='nipy/info.py' mode='rt' encoding='UTF-8'>
exec(open(_info_fname, 'rt').read(), {}, INFO_VARS)
ResourceWarning: Enable tracemalloc to get the object allocation traceback
lapack_opt_info:
lapack_mkl_info:
customize UnixCCompiler
libraries mkl_rt not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
openblas_lapack_info:
libraries openblas not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
openblas_clapack_info:
libraries openblas,lapack not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
flame_info:
libraries flame not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
atlas_3_10_threads_info:
Setting PTATLAS=ATLAS
libraries lapack_atlas not found in /usr/local/lib
libraries tatlas,tatlas not found in /usr/local/lib
libraries lapack_atlas not found in /usr/lib
libraries tatlas,tatlas not found in /usr/lib
libraries lapack_atlas not found in /usr/lib/x86_64-linux-gnu
libraries tatlas,tatlas not found in /usr/lib/x86_64-linux-gnu
<class 'numpy.distutils.system_info.atlas_3_10_threads_info'>
NOT AVAILABLE
atlas_3_10_info:
libraries lapack_atlas not found in /usr/local/lib
libraries satlas,satlas not found in /usr/local/lib
libraries lapack_atlas not found in /usr/lib
libraries satlas,satlas not found in /usr/lib
libraries lapack_atlas not found in /usr/lib/x86_64-linux-gnu
libraries satlas,satlas not found in /usr/lib/x86_64-linux-gnu
<class 'numpy.distutils.system_info.atlas_3_10_info'>
NOT AVAILABLE
atlas_threads_info:
Setting PTATLAS=ATLAS
libraries lapack_atlas not found in /usr/local/lib
libraries ptf77blas,ptcblas,atlas not found in /usr/local/lib
libraries lapack_atlas not found in /usr/lib
libraries ptf77blas,ptcblas,atlas not found in /usr/lib
libraries lapack_atlas not found in /usr/lib/x86_64-linux-gnu
libraries ptf77blas,ptcblas,atlas not found in /usr/lib/x86_64-linux-gnu
<class 'numpy.distutils.system_info.atlas_threads_info'>
NOT AVAILABLE
atlas_info:
libraries lapack_atlas not found in /usr/local/lib
libraries f77blas,cblas,atlas not found in /usr/local/lib
libraries lapack_atlas not found in /usr/lib
libraries f77blas,cblas,atlas not found in /usr/lib
libraries lapack_atlas not found in /usr/lib/x86_64-linux-gnu
libraries f77blas,cblas,atlas not found in /usr/lib/x86_64-linux-gnu
<class 'numpy.distutils.system_info.atlas_info'>
NOT AVAILABLE
accelerate_info:
NOT AVAILABLE
lapack_info:
FOUND:
libraries = ['lapack', 'lapack']
library_dirs = ['/usr/lib/x86_64-linux-gnu']
language = f77
blas_opt_info:
blas_mkl_info:
libraries mkl_rt not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
blis_info:
libraries blis not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
openblas_info:
libraries openblas not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
atlas_3_10_blas_threads_info:
Setting PTATLAS=ATLAS
libraries tatlas not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
atlas_3_10_blas_info:
libraries satlas not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
atlas_blas_threads_info:
Setting PTATLAS=ATLAS
libraries ptf77blas,ptcblas,atlas not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
atlas_blas_info:
libraries f77blas,cblas,atlas not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
/usr/lib/python3/dist-packages/numpy/distutils/system_info.py:1914: UserWarning:
Optimized (vendor) Blas libraries are not found.
Falls back to netlib Blas library which has worse performance.
A better performance should be easily gained by switching
Blas library.
if self._calc_info(blas):
blas_info:
C compiler: x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -g -Og -Wall -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/build/nipy-0.4.3~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC
creating /tmp/tmpfd4sjtfh/tmp
creating /tmp/tmpfd4sjtfh/tmp/tmpfd4sjtfh
compile options: '-I/usr/local/include -I/usr/include -c'
x86_64-linux-gnu-gcc: /tmp/tmpfd4sjtfh/source.c
x86_64-linux-gnu-gcc -pthread /tmp/tmpfd4sjtfh/tmp/tmpfd4sjtfh/source.o -lblas -o /tmp/tmpfd4sjtfh/a.out
FOUND:
libraries = ['blas', 'blas']
library_dirs = ['/usr/lib/x86_64-linux-gnu']
include_dirs = ['/usr/local/include', '/usr/include']
language = c
define_macros = [('HAVE_CBLAS', None)]
FOUND:
define_macros = [('NO_ATLAS_INFO', 1), ('HAVE_CBLAS', None)]
libraries = ['blas', 'blas']
library_dirs = ['/usr/lib/x86_64-linux-gnu']
include_dirs = ['/usr/local/include', '/usr/include']
language = c
FOUND:
libraries = ['lapack', 'lapack', 'blas', 'blas']
library_dirs = ['/usr/lib/x86_64-linux-gnu']
language = c
define_macros = [('NO_ATLAS_INFO', 1), ('HAVE_CBLAS', None)]
include_dirs = ['/usr/local/include', '/usr/include']
Building with (slow) Lapack lite distribution: set NIPY_EXTERNAL_LAPACK environment variable or use setup.cfg to enable link to optimized BLAS / LAPACK
LAPACK build options:
library_dirs: []
libraries: []
lapack_info: {'libraries': ['lapack', 'lapack', 'blas', 'blas'], 'library_dirs': ['/usr/lib/x86_64-linux-gnu'], 'language': 'c', 'define_macros': [('NO_ATLAS_INFO', 1), ('HAVE_CBLAS', None)], 'include_dirs': ['/usr/local/include', '/usr/include']}
running config
debian/rules override_dh_auto_build-indep
make[1]: Entering directory '/build/nipy-0.4.3~rc1'
: # I: build the arch-dep packages to be able to build the docs
dh_auto_build
pybuild --build --test-nose -i python{version} -p "3.8 3.9"
I: pybuild base:232: /usr/bin/python3.8 setup.py build
lapack_opt_info:
lapack_mkl_info:
customize UnixCCompiler
libraries mkl_rt not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
openblas_lapack_info:
libraries openblas not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
openblas_clapack_info:
libraries openblas,lapack not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
flame_info:
libraries flame not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
atlas_3_10_threads_info:
Setting PTATLAS=ATLAS
libraries lapack_atlas not found in /usr/local/lib
libraries tatlas,tatlas not found in /usr/local/lib
libraries lapack_atlas not found in /usr/lib
libraries tatlas,tatlas not found in /usr/lib
libraries lapack_atlas not found in /usr/lib/x86_64-linux-gnu
libraries tatlas,tatlas not found in /usr/lib/x86_64-linux-gnu
<class 'numpy.distutils.system_info.atlas_3_10_threads_info'>
NOT AVAILABLE
atlas_3_10_info:
libraries lapack_atlas not found in /usr/local/lib
libraries satlas,satlas not found in /usr/local/lib
libraries lapack_atlas not found in /usr/lib
libraries satlas,satlas not found in /usr/lib
libraries lapack_atlas not found in /usr/lib/x86_64-linux-gnu
libraries satlas,satlas not found in /usr/lib/x86_64-linux-gnu
<class 'numpy.distutils.system_info.atlas_3_10_info'>
NOT AVAILABLE
atlas_threads_info:
Setting PTATLAS=ATLAS
libraries lapack_atlas not found in /usr/local/lib
libraries ptf77blas,ptcblas,atlas not found in /usr/local/lib
libraries lapack_atlas not found in /usr/lib
libraries ptf77blas,ptcblas,atlas not found in /usr/lib
libraries lapack_atlas not found in /usr/lib/x86_64-linux-gnu
libraries ptf77blas,ptcblas,atlas not found in /usr/lib/x86_64-linux-gnu
<class 'numpy.distutils.system_info.atlas_threads_info'>
NOT AVAILABLE
atlas_info:
libraries lapack_atlas not found in /usr/local/lib
libraries f77blas,cblas,atlas not found in /usr/local/lib
libraries lapack_atlas not found in /usr/lib
libraries f77blas,cblas,atlas not found in /usr/lib
libraries lapack_atlas not found in /usr/lib/x86_64-linux-gnu
libraries f77blas,cblas,atlas not found in /usr/lib/x86_64-linux-gnu
<class 'numpy.distutils.system_info.atlas_info'>
NOT AVAILABLE
accelerate_info:
NOT AVAILABLE
lapack_info:
FOUND:
libraries = ['lapack', 'lapack']
library_dirs = ['/usr/lib/x86_64-linux-gnu']
language = f77
blas_opt_info:
blas_mkl_info:
libraries mkl_rt not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
blis_info:
libraries blis not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
openblas_info:
libraries openblas not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
atlas_3_10_blas_threads_info:
Setting PTATLAS=ATLAS
libraries tatlas not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
atlas_3_10_blas_info:
libraries satlas not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
atlas_blas_threads_info:
Setting PTATLAS=ATLAS
libraries ptf77blas,ptcblas,atlas not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
atlas_blas_info:
libraries f77blas,cblas,atlas not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
blas_info:
C compiler: x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/build/nipy-0.4.3~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC
creating /tmp/tmphip24ny2/tmp
creating /tmp/tmphip24ny2/tmp/tmphip24ny2
compile options: '-I/usr/local/include -I/usr/include -c'
x86_64-linux-gnu-gcc: /tmp/tmphip24ny2/source.c
x86_64-linux-gnu-gcc -pthread /tmp/tmphip24ny2/tmp/tmphip24ny2/source.o -lblas -o /tmp/tmphip24ny2/a.out
FOUND:
libraries = ['blas', 'blas']
library_dirs = ['/usr/lib/x86_64-linux-gnu']
include_dirs = ['/usr/local/include', '/usr/include']
language = c
define_macros = [('HAVE_CBLAS', None)]
FOUND:
define_macros = [('NO_ATLAS_INFO', 1), ('HAVE_CBLAS', None)]
libraries = ['blas', 'blas']
library_dirs = ['/usr/lib/x86_64-linux-gnu']
include_dirs = ['/usr/local/include', '/usr/include']
language = c
FOUND:
libraries = ['lapack', 'lapack', 'blas', 'blas']
library_dirs = ['/usr/lib/x86_64-linux-gnu']
language = c
define_macros = [('NO_ATLAS_INFO', 1), ('HAVE_CBLAS', None)]
include_dirs = ['/usr/local/include', '/usr/include']
Building with (slow) Lapack lite distribution: set NIPY_EXTERNAL_LAPACK environment variable or use setup.cfg to enable link to optimized BLAS / LAPACK
LAPACK build options:
library_dirs: []
libraries: []
lapack_info: {'libraries': ['lapack', 'lapack', 'blas', 'blas'], 'library_dirs': ['/usr/lib/x86_64-linux-gnu'], 'language': 'c', 'define_macros': [('NO_ATLAS_INFO', 1), ('HAVE_CBLAS', None)], 'include_dirs': ['/usr/local/include', '/usr/include']}
running build
running config_cc
unifing config_cc, config, build_clib, build_ext, build commands --compiler options
running config_fc
unifing config_fc, config, build_clib, build_ext, build commands --fcompiler options
running build_src
build_src
building py_modules sources
creating build
creating build/src.linux-x86_64-3.8
creating build/src.linux-x86_64-3.8/nipy
creating build/src.linux-x86_64-3.8/nipy/labs
building library "cstat" sources
building extension "nipy.algorithms.registration._registration" sources
cythonc:> build/src.linux-x86_64-3.8/nipy/algorithms/registration/_registration.c
creating build/src.linux-x86_64-3.8/nipy/algorithms
creating build/src.linux-x86_64-3.8/nipy/algorithms/registration
building extension "nipy.algorithms.segmentation._segmentation" sources
cythonc:> build/src.linux-x86_64-3.8/nipy/algorithms/segmentation/_segmentation.c
creating build/src.linux-x86_64-3.8/nipy/algorithms/segmentation
building extension "nipy.algorithms.statistics.intvol" sources
cythonc:> build/src.linux-x86_64-3.8/nipy/algorithms/statistics/intvol.c
creating build/src.linux-x86_64-3.8/nipy/algorithms/statistics
building extension "nipy.algorithms.statistics.histogram" sources
cythonc:> build/src.linux-x86_64-3.8/nipy/algorithms/statistics/histogram.c
building extension "nipy.algorithms.statistics._quantile" sources
cythonc:> build/src.linux-x86_64-3.8/nipy/algorithms/statistics/_quantile.c
building extension "nipy.algorithms.graph._graph" sources
building extension "nipy.labs.bindings.linalg" sources
cythonc:> build/src.linux-x86_64-3.8/nipy/labs/bindings/linalg.c
creating build/src.linux-x86_64-3.8/nipy/labs/bindings
/usr/lib/python3/dist-packages/numpy/distutils/system_info.py:1914: UserWarning:
Optimized (vendor) Blas libraries are not found.
Falls back to netlib Blas library which has worse performance.
A better performance should be easily gained by switching
Blas library.
if self._calc_info(blas):
/usr/lib/python3/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /build/nipy-0.4.3~rc1/nipy/algorithms/registration/_registration.pyx
tree = Parsing.p_module(s, pxd, full_module_name)
/usr/lib/python3/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /build/nipy-0.4.3~rc1/nipy/algorithms/segmentation/_segmentation.pyx
tree = Parsing.p_module(s, pxd, full_module_name)
/usr/lib/python3/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /build/nipy-0.4.3~rc1/nipy/algorithms/statistics/intvol.pyx
tree = Parsing.p_module(s, pxd, full_module_name)
/usr/lib/python3/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /build/nipy-0.4.3~rc1/nipy/algorithms/statistics/histogram.pyx
tree = Parsing.p_module(s, pxd, full_module_name)
/usr/lib/python3/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /build/nipy-0.4.3~rc1/nipy/algorithms/statistics/_quantile.pyx
tree = Parsing.p_module(s, pxd, full_module_name)
warning: nipy/algorithms/statistics/_quantile.pyx:51:16: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/algorithms/statistics/_quantile.pyx:51:20: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
/usr/lib/python3/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /build/nipy-0.4.3~rc1/nipy/labs/bindings/linalg.pyx
tree = Parsing.p_module(s, pxd, full_module_name)
warning: nipy/labs/bindings/linalg.pyx:108:20: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/linalg.pyx:108:24: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/linalg.pyx:122:20: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/linalg.pyx:122:24: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/linalg.pyx:136:20: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/linalg.pyx:136:24: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/linalg.pyx:150:20: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/linalg.pyx:150:24: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/linalg.pyx:164:20: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/linalg.pyx:164:24: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/linalg.pyx:164:28: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/linalg.pyx:180:20: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/linalg.pyx:180:24: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/linalg.pyx:180:28: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/linalg.pyx:196:20: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/linalg.pyx:196:24: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/linalg.pyx:196:28: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/linalg.pyx:212:20: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/linalg.pyx:212:24: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/linalg.pyx:212:28: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/linalg.pyx:303:20: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/linalg.pyx:303:24: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/linalg.pyx:315:20: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/linalg.pyx:315:24: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/linalg.pyx:315:28: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/linalg.pyx:371:20: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/linalg.pyx:371:24: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/linalg.pyx:377:20: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/linalg.pyx:377:24: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/linalg.pyx:377:28: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/linalg.pyx:387:20: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
building extension "nipy.labs.bindings.array" sources
cythonc:> build/src.linux-x86_64-3.8/nipy/labs/bindings/array.c
building extension "nipy.labs.bindings.wrapper" sources
cythonc:> build/src.linux-x86_64-3.8/nipy/labs/bindings/wrapper.c
warning: nipy/labs/bindings/linalg.pyx:387:24: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/linalg.pyx:406:20: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/linalg.pyx:406:24: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/linalg.pyx:406:28: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/linalg.pyx:406:32: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/linalg.pyx:431:20: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/linalg.pyx:431:24: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/linalg.pyx:431:28: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/linalg.pyx:431:32: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/linalg.pyx:458:20: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/linalg.pyx:458:24: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/linalg.pyx:458:28: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/linalg.pyx:485:20: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/linalg.pyx:485:24: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/linalg.pyx:485:28: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/linalg.pyx:510:20: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/linalg.pyx:510:24: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/linalg.pyx:510:28: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/linalg.pyx:532:20: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/linalg.pyx:532:24: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/linalg.pyx:532:28: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/linalg.pyx:532:32: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
/usr/lib/python3/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /build/nipy-0.4.3~rc1/nipy/labs/bindings/array.pyx
tree = Parsing.p_module(s, pxd, full_module_name)
warning: nipy/labs/bindings/array.pyx:45:19: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/array.pyx:45:23: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/array.pyx:60:19: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/array.pyx:60:23: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/array.pyx:60:27: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/array.pyx:77:19: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/array.pyx:77:23: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/array.pyx:77:27: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/array.pyx:94:19: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/array.pyx:94:23: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/array.pyx:94:27: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/array.pyx:111:19: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/array.pyx:111:23: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/array.pyx:111:27: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
/usr/lib/python3/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /build/nipy-0.4.3~rc1/nipy/labs/bindings/wrapper.pyx
tree = Parsing.p_module(s, pxd, full_module_name)
warning: nipy/labs/bindings/wrapper.pyx:65:20: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/wrapper.pyx:65:24: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/wrapper.pyx:108:20: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/wrapper.pyx:108:24: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/wrapper.pyx:120:19: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/wrapper.pyx:120:23: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
building extension "nipy.labs.glm.kalman" sources
cythonc:> build/src.linux-x86_64-3.8/nipy/labs/glm/kalman.c
creating build/src.linux-x86_64-3.8/nipy/labs/glm
building extension "nipy.labs.group.onesample" sources
cythonc:> build/src.linux-x86_64-3.8/nipy/labs/group/onesample.c
creating build/src.linux-x86_64-3.8/nipy/labs/group
building extension "nipy.labs.group.twosample" sources
cythonc:> build/src.linux-x86_64-3.8/nipy/labs/group/twosample.c
warning: nipy/labs/bindings/wrapper.pyx:132:20: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/wrapper.pyx:132:24: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/wrapper.pyx:132:28: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/wrapper.pyx:155:20: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/wrapper.pyx:155:24: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/wrapper.pyx:187:20: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/wrapper.pyx:187:24: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
/usr/lib/python3/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /build/nipy-0.4.3~rc1/nipy/labs/glm/kalman.pyx
tree = Parsing.p_module(s, pxd, full_module_name)
warning: nipy/labs/glm/kalman.pyx:87:20: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/glm/kalman.pyx:87:24: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/glm/kalman.pyx:87:28: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/glm/kalman.pyx:164:20: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/glm/kalman.pyx:164:24: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/glm/kalman.pyx:164:28: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/glm/kalman.pyx:164:33: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/glm/kalman.pyx:164:38: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
/usr/lib/python3/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /build/nipy-0.4.3~rc1/nipy/labs/group/onesample.pyx
tree = Parsing.p_module(s, pxd, full_module_name)
warning: nipy/labs/group/onesample.pyx:96:18: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/group/onesample.pyx:96:22: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/group/onesample.pyx:96:26: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/group/onesample.pyx:96:35: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/group/onesample.pyx:165:18: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/group/onesample.pyx:165:22: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/group/onesample.pyx:165:26: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/group/onesample.pyx:165:30: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/group/onesample.pyx:165:39: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/group/onesample.pyx:236:18: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/group/onesample.pyx:236:22: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/group/onesample.pyx:236:26: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/group/onesample.pyx:236:30: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/group/onesample.pyx:280:18: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/group/onesample.pyx:280:22: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/group/onesample.pyx:280:26: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/group/onesample.pyx:280:31: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
/usr/lib/python3/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /build/nipy-0.4.3~rc1/nipy/labs/group/twosample.pyx
tree = Parsing.p_module(s, pxd, full_module_name)
warning: nipy/labs/group/twosample.pyx:73:18: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/group/twosample.pyx:73:23: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/group/twosample.pyx:73:28: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/group/twosample.pyx:73:32: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/group/twosample.pyx:73:37: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/group/twosample.pyx:74:17: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/group/twosample.pyx:74:24: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/group/twosample.pyx:158:18: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
building extension "nipy.labs.group.glm_twolevel" sources
cythonc:> build/src.linux-x86_64-3.8/nipy/labs/group/glm_twolevel.c
building extension "nipy.labs.utils.routines" sources
cythonc:> build/src.linux-x86_64-3.8/nipy/labs/utils/routines.c
creating build/src.linux-x86_64-3.8/nipy/labs/utils
building data_files sources
build_src: building npy-pkg config files
running build_py
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy
copying nipy/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy
copying nipy/setup.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy
copying nipy/info.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy
copying nipy/pkg_info.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy
copying build/src.linux-x86_64-3.8/nipy/__config__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms
copying nipy/algorithms/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms
copying nipy/algorithms/optimize.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms
copying nipy/algorithms/setup.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms
copying nipy/algorithms/resample.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms
copying nipy/algorithms/kernel_smooth.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms
copying nipy/algorithms/fwhm.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms
copying nipy/algorithms/interpolation.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/tests
copying nipy/algorithms/tests/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/tests
copying nipy/algorithms/tests/test_resample.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/tests
copying nipy/algorithms/tests/test_kernel_smooth.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/tests
copying nipy/algorithms/tests/test_interpolator.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/tests
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/registration
copying nipy/algorithms/registration/polyaffine.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/registration
copying nipy/algorithms/registration/similarity_measures.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/registration
copying nipy/algorithms/registration/transform.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/registration
copying nipy/algorithms/registration/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/registration
copying nipy/algorithms/registration/type_check.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/registration
copying nipy/algorithms/registration/setup.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/registration
copying nipy/algorithms/registration/chain_transform.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/registration
copying nipy/algorithms/registration/resample.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/registration
copying nipy/algorithms/registration/optimizer.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/registration
copying nipy/algorithms/registration/histogram_registration.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/registration
copying nipy/algorithms/registration/groupwise_registration.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/registration
copying nipy/algorithms/registration/affine.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/registration
copying nipy/algorithms/registration/scripting.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/registration
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/registration/tests
copying nipy/algorithms/registration/tests/test_scripting.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/registration/tests
copying nipy/algorithms/registration/tests/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/registration/tests
copying nipy/algorithms/registration/tests/test_cubic_spline.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/registration/tests
copying nipy/algorithms/registration/tests/test_affine.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/registration/tests
copying nipy/algorithms/registration/tests/test_resample.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/registration/tests
copying nipy/algorithms/registration/tests/test_histogram_registration.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/registration/tests
copying nipy/algorithms/registration/tests/test_register.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/registration/tests
copying nipy/algorithms/registration/tests/test_fmri_realign4d.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/registration/tests
copying nipy/algorithms/registration/tests/test_transform.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/registration/tests
copying nipy/algorithms/registration/tests/test_chain_transforms.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/registration/tests
copying nipy/algorithms/registration/tests/test_slice_timing.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/registration/tests
copying nipy/algorithms/registration/tests/test_polyaffine.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/registration/tests
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/slicetiming
copying nipy/algorithms/slicetiming/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/slicetiming
copying nipy/algorithms/slicetiming/setup.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/slicetiming
copying nipy/algorithms/slicetiming/timefuncs.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/slicetiming
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/slicetiming/tests
copying nipy/algorithms/slicetiming/tests/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/slicetiming/tests
copying nipy/algorithms/slicetiming/tests/test_timefuncs.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/slicetiming/tests
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/segmentation
copying nipy/algorithms/segmentation/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/segmentation
copying nipy/algorithms/segmentation/brain_segmentation.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/segmentation
copying nipy/algorithms/segmentation/setup.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/segmentation
copying nipy/algorithms/segmentation/segmentation.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/segmentation
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/segmentation/tests
copying nipy/algorithms/segmentation/tests/test_segmentation.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/segmentation/tests
copying nipy/algorithms/segmentation/tests/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/segmentation/tests
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/statistics
copying nipy/algorithms/statistics/bayesian_mixed_effects.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/statistics
copying nipy/algorithms/statistics/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/statistics
copying nipy/algorithms/statistics/setup.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/statistics
copying nipy/algorithms/statistics/empirical_pvalue.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/statistics
copying nipy/algorithms/statistics/utils.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/statistics
copying nipy/algorithms/statistics/onesample.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/statistics
copying nipy/algorithms/statistics/api.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/statistics
copying nipy/algorithms/statistics/rft.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/statistics
copying nipy/algorithms/statistics/mixed_effects_stat.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/statistics
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/statistics/models
copying nipy/algorithms/statistics/models/setupscons.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/statistics/models
copying nipy/algorithms/statistics/models/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/statistics/models
copying nipy/algorithms/statistics/models/nlsmodel.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/statistics/models
copying nipy/algorithms/statistics/models/setup.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/statistics/models
copying nipy/algorithms/statistics/models/info.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/statistics/models
copying nipy/algorithms/statistics/models/utils.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/statistics/models
copying nipy/algorithms/statistics/models/model.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/statistics/models
copying nipy/algorithms/statistics/models/regression.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/statistics/models
copying nipy/algorithms/statistics/models/glm.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/statistics/models
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/statistics/models/family
copying nipy/algorithms/statistics/models/family/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/statistics/models/family
copying nipy/algorithms/statistics/models/family/varfuncs.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/statistics/models/family
copying nipy/algorithms/statistics/models/family/links.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/statistics/models/family
copying nipy/algorithms/statistics/models/family/family.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/statistics/models/family
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/statistics/models/tests
copying nipy/algorithms/statistics/models/tests/test_anova.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/statistics/models/tests
copying nipy/algorithms/statistics/models/tests/test_glm.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/statistics/models/tests
copying nipy/algorithms/statistics/models/tests/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/statistics/models/tests
copying nipy/algorithms/statistics/models/tests/test_regression.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/statistics/models/tests
copying nipy/algorithms/statistics/models/tests/test_ar.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/statistics/models/tests
copying nipy/algorithms/statistics/models/tests/test_model.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/statistics/models/tests
copying nipy/algorithms/statistics/models/tests/exampledata.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/statistics/models/tests
copying nipy/algorithms/statistics/models/tests/test_olsR.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/statistics/models/tests
copying nipy/algorithms/statistics/models/tests/test_estimable.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/statistics/models/tests
copying nipy/algorithms/statistics/models/tests/test_utils.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/statistics/models/tests
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/statistics/formula
copying nipy/algorithms/statistics/formula/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/statistics/formula
copying nipy/algorithms/statistics/formula/setup.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/statistics/formula
copying nipy/algorithms/statistics/formula/formulae.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/statistics/formula
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/statistics/formula/tests
copying nipy/algorithms/statistics/formula/tests/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/statistics/formula/tests
copying nipy/algorithms/statistics/formula/tests/test_formula.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/statistics/formula/tests
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/statistics/bench
copying nipy/algorithms/statistics/bench/bench_intvol.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/statistics/bench
copying nipy/algorithms/statistics/bench/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/statistics/bench
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/statistics/tests
copying nipy/algorithms/statistics/tests/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/statistics/tests
copying nipy/algorithms/statistics/tests/test_mixed_effects.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/statistics/tests
copying nipy/algorithms/statistics/tests/test_rft.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/statistics/tests
copying nipy/algorithms/statistics/tests/test_intrinsic_volumes.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/statistics/tests
copying nipy/algorithms/statistics/tests/test_onesample.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/statistics/tests
copying nipy/algorithms/statistics/tests/test_quantile.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/statistics/tests
copying nipy/algorithms/statistics/tests/test_empirical_pvalue.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/statistics/tests
copying nipy/algorithms/statistics/tests/test_utils.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/statistics/tests
copying nipy/algorithms/statistics/tests/test_histogram.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/statistics/tests
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/diagnostics
copying nipy/algorithms/diagnostics/tsdiffplot.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/diagnostics
copying nipy/algorithms/diagnostics/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/diagnostics
copying nipy/algorithms/diagnostics/commands.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/diagnostics
copying nipy/algorithms/diagnostics/timediff.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/diagnostics
copying nipy/algorithms/diagnostics/setup.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/diagnostics
copying nipy/algorithms/diagnostics/screens.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/diagnostics
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/diagnostics/tests
copying nipy/algorithms/diagnostics/tests/test_time_difference.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/diagnostics/tests
copying nipy/algorithms/diagnostics/tests/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/diagnostics/tests
copying nipy/algorithms/diagnostics/tests/test_screen.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/diagnostics/tests
copying nipy/algorithms/diagnostics/tests/test_commands.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/diagnostics/tests
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/clustering
copying nipy/algorithms/clustering/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/clustering
copying nipy/algorithms/clustering/bgmm.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/clustering
copying nipy/algorithms/clustering/gmm.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/clustering
copying nipy/algorithms/clustering/von_mises_fisher_mixture.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/clustering
copying nipy/algorithms/clustering/setup.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/clustering
copying nipy/algorithms/clustering/ggmixture.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/clustering
copying nipy/algorithms/clustering/hierarchical_clustering.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/clustering
copying nipy/algorithms/clustering/utils.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/clustering
copying nipy/algorithms/clustering/imm.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/clustering
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/clustering/tests
copying nipy/algorithms/clustering/tests/test_vmm.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/clustering/tests
copying nipy/algorithms/clustering/tests/test_ggm.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/clustering/tests
copying nipy/algorithms/clustering/tests/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/clustering/tests
copying nipy/algorithms/clustering/tests/test_gmm.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/clustering/tests
copying nipy/algorithms/clustering/tests/test_bgmm.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/clustering/tests
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copying nipy/algorithms/clustering/tests/test_hierarchical_clustering.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/clustering/tests
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copying nipy/algorithms/utils/fast_distance.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/utils
copying nipy/algorithms/utils/matrices.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/utils
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/utils/tests
copying nipy/algorithms/utils/tests/test_pca_image.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/utils/tests
copying nipy/algorithms/utils/tests/test_matrices.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/utils/tests
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copying nipy/algorithms/utils/tests/test_fast_distance.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/utils/tests
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creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/graph
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copying nipy/algorithms/graph/forest.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/graph
copying nipy/algorithms/graph/graph.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/graph
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copying nipy/algorithms/graph/tests/test_forest.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/graph/tests
copying nipy/algorithms/graph/tests/test_graph.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/graph/tests
copying nipy/algorithms/graph/tests/test_bipartite_graph.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/graph/tests
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/group
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creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/group/tests
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copying nipy/algorithms/group/tests/test_parcel_analysis.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/group/tests
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/interfaces
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copying nipy/interfaces/spm.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/interfaces
copying nipy/interfaces/matlab.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/interfaces
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/interfaces/tests
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copying nipy/interfaces/tests/test_mlabtemp.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/interfaces/tests
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/core
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creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/core/image
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copying nipy/core/image/roi.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/core/image
copying nipy/core/image/image_spaces.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/core/image
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copying nipy/core/image/image_list.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/core/image
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/core/image/tests
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copying nipy/core/image/tests/test_rollimg.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/core/image/tests
copying nipy/core/image/tests/test_image_spaces.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/core/image/tests
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/core/utils
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copying nipy/core/utils/setup.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/core/utils
copying nipy/core/utils/generators.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/core/utils
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/core/utils/tests
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copying nipy/modalities/fmri/tests/test_fmri.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/modalities/fmri/tests
copying nipy/modalities/fmri/tests/test_aliases.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/modalities/fmri/tests
copying nipy/modalities/fmri/tests/test_realfuncs.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/modalities/fmri/tests
copying nipy/modalities/fmri/tests/test_hrf.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/modalities/fmri/tests
copying nipy/modalities/fmri/tests/test_iterators.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/modalities/fmri/tests
copying nipy/modalities/fmri/tests/test_utils.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/modalities/fmri/tests
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/modalities/fmri/fmristat
copying nipy/modalities/fmri/fmristat/invert.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/modalities/fmri/fmristat
copying nipy/modalities/fmri/fmristat/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/modalities/fmri/fmristat
copying nipy/modalities/fmri/fmristat/hrf.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/modalities/fmri/fmristat
copying nipy/modalities/fmri/fmristat/setup.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/modalities/fmri/fmristat
copying nipy/modalities/fmri/fmristat/outputters.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/modalities/fmri/fmristat
copying nipy/modalities/fmri/fmristat/model.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/modalities/fmri/fmristat
copying nipy/modalities/fmri/fmristat/api.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/modalities/fmri/fmristat
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/modalities/fmri/fmristat/tests
copying nipy/modalities/fmri/fmristat/tests/test_iterables.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/modalities/fmri/fmristat/tests
copying nipy/modalities/fmri/fmristat/tests/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/modalities/fmri/fmristat/tests
copying nipy/modalities/fmri/fmristat/tests/test_outputters.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/modalities/fmri/fmristat/tests
copying nipy/modalities/fmri/fmristat/tests/test_FIAC.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/modalities/fmri/fmristat/tests
copying nipy/modalities/fmri/fmristat/tests/test_model.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/modalities/fmri/fmristat/tests
copying nipy/modalities/fmri/fmristat/tests/test_hrf.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/modalities/fmri/fmristat/tests
copying nipy/modalities/fmri/fmristat/tests/FIACdesigns.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/modalities/fmri/fmristat/tests
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/modalities/fmri/spm
copying nipy/modalities/fmri/spm/reml.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/modalities/fmri/spm
copying nipy/modalities/fmri/spm/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/modalities/fmri/spm
copying nipy/modalities/fmri/spm/correlation.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/modalities/fmri/spm
copying nipy/modalities/fmri/spm/model.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/modalities/fmri/spm
copying nipy/modalities/fmri/spm/trace.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/modalities/fmri/spm
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/utils
copying nipy/utils/perlpie.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/utils
copying nipy/utils/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/utils
copying nipy/utils/skip_test.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/utils
copying nipy/utils/setup.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/utils
copying nipy/utils/compat3.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/utils
copying nipy/utils/arrays.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/utils
copying nipy/utils/utilities.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/utils
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/utils/tests
copying nipy/utils/tests/test_arrays.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/utils/tests
copying nipy/utils/tests/test_compat3.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/utils/tests
copying nipy/utils/tests/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/utils/tests
copying nipy/utils/tests/test_skip_test.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/utils/tests
copying nipy/utils/tests/test_utilities.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/utils/tests
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/tests
copying nipy/tests/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/tests
copying nipy/tests/scriptrunner.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/tests
copying nipy/tests/test_scripts.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/tests
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/externals
copying nipy/externals/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/externals
copying nipy/externals/validate.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/externals
copying nipy/externals/six.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/externals
copying nipy/externals/setup.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/externals
copying nipy/externals/configobj.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/externals
copying nipy/externals/argparse.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/externals
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/externals/transforms3d
copying nipy/externals/transforms3d/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/externals/transforms3d
copying nipy/externals/transforms3d/setup.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/externals/transforms3d
copying nipy/externals/transforms3d/taitbryan.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/externals/transforms3d
copying nipy/externals/transforms3d/quaternions.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/externals/transforms3d
copying nipy/externals/transforms3d/utils.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/externals/transforms3d
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/externals/transforms3d/tests
copying nipy/externals/transforms3d/tests/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/externals/transforms3d/tests
copying nipy/externals/transforms3d/tests/test_taitbryan.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/externals/transforms3d/tests
copying nipy/externals/transforms3d/tests/samples.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/externals/transforms3d/tests
copying nipy/externals/transforms3d/tests/test_quaternions.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/externals/transforms3d/tests
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/testing
copying nipy/testing/doctester.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/testing
copying nipy/testing/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/testing
copying nipy/testing/nosetester.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/testing
copying nipy/testing/setup.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/testing
copying nipy/testing/decorators.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/testing
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/testing/tests
copying nipy/testing/tests/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/testing/tests
copying nipy/testing/tests/test_doctester.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/testing/tests
copying nipy/testing/tests/test_images.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/testing/tests
copying nipy/testing/tests/test_doctesting.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/testing/tests
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/labs
copying nipy/labs/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/labs
copying nipy/labs/mask.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/labs
copying nipy/labs/setup.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/labs
copying nipy/labs/viz3d.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/labs
copying nipy/labs/statistical_mapping.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/labs
copying nipy/labs/viz.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/labs
copying build/src.linux-x86_64-3.8/nipy/labs/__config__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/labs
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/labs/bindings
copying nipy/labs/bindings/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/labs/bindings
copying nipy/labs/bindings/setup.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/labs/bindings
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/labs/bindings/tests
copying nipy/labs/bindings/tests/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/labs/bindings/tests
copying nipy/labs/bindings/tests/test_array.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/labs/bindings/tests
copying nipy/labs/bindings/tests/test_blas1.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/labs/bindings/tests
copying nipy/labs/bindings/tests/test_linalg.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/labs/bindings/tests
copying nipy/labs/bindings/tests/test_blas3.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/labs/bindings/tests
copying nipy/labs/bindings/tests/test_numpy.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/labs/bindings/tests
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/labs/bindings/benchmarks
copying nipy/labs/bindings/benchmarks/bench_numpy.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/labs/bindings/benchmarks
copying nipy/labs/bindings/benchmarks/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/labs/bindings/benchmarks
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/labs/glm
copying nipy/labs/glm/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/labs/glm
copying nipy/labs/glm/setup.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/labs/glm
copying nipy/labs/glm/glm.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/labs/glm
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/labs/glm/tests
copying nipy/labs/glm/tests/test_glm.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/labs/glm/tests
copying nipy/labs/glm/tests/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/labs/glm/tests
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/labs/glm/benchmarks
copying nipy/labs/glm/benchmarks/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/labs/glm/benchmarks
copying nipy/labs/glm/benchmarks/bench_glm.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/labs/glm/benchmarks
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/labs/group
copying nipy/labs/group/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/labs/group
copying nipy/labs/group/permutation_test.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/labs/group
copying nipy/labs/group/setup.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/labs/group
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/labs/group/tests
copying nipy/labs/group/tests/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/labs/group/tests
copying nipy/labs/group/tests/test_permutation_test.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/labs/group/tests
copying nipy/labs/group/tests/test_onesample_stat.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/labs/group/tests
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/labs/spatial_models
copying nipy/labs/spatial_models/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/labs/spatial_models
copying nipy/labs/spatial_models/parcellation.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/labs/spatial_models
copying nipy/labs/spatial_models/mroi.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/labs/spatial_models
copying nipy/labs/spatial_models/discrete_domain.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/labs/spatial_models
copying nipy/labs/spatial_models/hierarchical_parcellation.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/labs/spatial_models
copying nipy/labs/spatial_models/setup.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/labs/spatial_models
copying nipy/labs/spatial_models/structural_bfls.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/labs/spatial_models
copying nipy/labs/spatial_models/hroi.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/labs/spatial_models
copying nipy/labs/spatial_models/bayesian_structural_analysis.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/labs/spatial_models
copying nipy/labs/spatial_models/parcel_io.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/labs/spatial_models
copying nipy/labs/spatial_models/bsa_io.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/labs/spatial_models
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/labs/spatial_models/tests
copying nipy/labs/spatial_models/tests/test_parcel.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/labs/spatial_models/tests
copying nipy/labs/spatial_models/tests/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/labs/spatial_models/tests
copying nipy/labs/spatial_models/tests/test_hroi.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/labs/spatial_models/tests
copying nipy/labs/spatial_models/tests/test_mroi.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/labs/spatial_models/tests
copying nipy/labs/spatial_models/tests/test_bsa_io.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/labs/spatial_models/tests
copying nipy/labs/spatial_models/tests/test_discrete_domain.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/labs/spatial_models/tests
copying nipy/labs/spatial_models/tests/test_parcel_io.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/labs/spatial_models/tests
copying nipy/labs/spatial_models/tests/test_bsa.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/labs/spatial_models/tests
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/labs/utils
copying nipy/labs/utils/reproducibility_measures.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/labs/utils
copying nipy/labs/utils/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/labs/utils
copying nipy/labs/utils/mask.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/labs/utils
copying nipy/labs/utils/setup.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/labs/utils
copying nipy/labs/utils/simul_multisubject_fmri_dataset.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/labs/utils
copying nipy/labs/utils/zscore.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/labs/utils
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/labs/utils/tests
copying nipy/labs/utils/tests/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/labs/utils/tests
copying nipy/labs/utils/tests/test_repro.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/labs/utils/tests
copying nipy/labs/utils/tests/test_misc.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/labs/utils/tests
copying nipy/labs/utils/tests/test_simul_multisubject_fmri_dataset.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/labs/utils/tests
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/labs/viz_tools
copying nipy/labs/viz_tools/cm.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/labs/viz_tools
copying nipy/labs/viz_tools/slicers.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/labs/viz_tools
copying nipy/labs/viz_tools/activation_maps.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/labs/viz_tools
copying nipy/labs/viz_tools/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/labs/viz_tools
copying nipy/labs/viz_tools/setup.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/labs/viz_tools
copying nipy/labs/viz_tools/maps_3d.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/labs/viz_tools
copying nipy/labs/viz_tools/coord_tools.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/labs/viz_tools
copying nipy/labs/viz_tools/edge_detect.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/labs/viz_tools
copying nipy/labs/viz_tools/anat_cache.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/labs/viz_tools
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/labs/viz_tools/test
copying nipy/labs/viz_tools/test/test_edge_detect.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/labs/viz_tools/test
copying nipy/labs/viz_tools/test/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/labs/viz_tools/test
copying nipy/labs/viz_tools/test/test_cm.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/labs/viz_tools/test
copying nipy/labs/viz_tools/test/test_activation_maps.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/labs/viz_tools/test
copying nipy/labs/viz_tools/test/test_slicers.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/labs/viz_tools/test
copying nipy/labs/viz_tools/test/test_coord_tools.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/labs/viz_tools/test
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/labs/datasets
copying nipy/labs/datasets/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/labs/datasets
copying nipy/labs/datasets/setup.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/labs/datasets
copying nipy/labs/datasets/converters.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/labs/datasets
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/labs/datasets/volumes
copying nipy/labs/datasets/volumes/volume_data.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/labs/datasets/volumes
copying nipy/labs/datasets/volumes/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/labs/datasets/volumes
copying nipy/labs/datasets/volumes/volume_field.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/labs/datasets/volumes
copying nipy/labs/datasets/volumes/volume_img.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/labs/datasets/volumes
copying nipy/labs/datasets/volumes/setup.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/labs/datasets/volumes
copying nipy/labs/datasets/volumes/volume_grid.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/labs/datasets/volumes
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/labs/datasets/volumes/tests
copying nipy/labs/datasets/volumes/tests/test_volume_data.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/labs/datasets/volumes/tests
copying nipy/labs/datasets/volumes/tests/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/labs/datasets/volumes/tests
copying nipy/labs/datasets/volumes/tests/test_volume_grid.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/labs/datasets/volumes/tests
copying nipy/labs/datasets/volumes/tests/test_volume_field.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/labs/datasets/volumes/tests
copying nipy/labs/datasets/volumes/tests/test_volume_img.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/labs/datasets/volumes/tests
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/labs/datasets/transforms
copying nipy/labs/datasets/transforms/transform.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/labs/datasets/transforms
copying nipy/labs/datasets/transforms/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/labs/datasets/transforms
copying nipy/labs/datasets/transforms/affine_utils.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/labs/datasets/transforms
copying nipy/labs/datasets/transforms/setup.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/labs/datasets/transforms
copying nipy/labs/datasets/transforms/affine_transform.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/labs/datasets/transforms
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/labs/datasets/transforms/tests
copying nipy/labs/datasets/transforms/tests/test_affine_transform.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/labs/datasets/transforms/tests
copying nipy/labs/datasets/transforms/tests/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/labs/datasets/transforms/tests
copying nipy/labs/datasets/transforms/tests/test_transform.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/labs/datasets/transforms/tests
copying nipy/labs/datasets/transforms/tests/test_affine_utils.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/labs/datasets/transforms/tests
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/labs/datasets/tests
copying nipy/labs/datasets/tests/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/labs/datasets/tests
copying nipy/labs/datasets/tests/test_converters.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/labs/datasets/tests
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/labs/tests
copying nipy/labs/tests/test_mask.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/labs/tests
copying nipy/labs/tests/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/labs/tests
copying nipy/labs/tests/test_statistical_mapping.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/labs/tests
running build_clib
customize UnixCCompiler
customize UnixCCompiler using build_clib
building 'cstat' library
compiling C sources
C compiler: x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/build/nipy-0.4.3~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC
creating build/temp.linux-x86_64-3.8
creating build/temp.linux-x86_64-3.8/build
creating build/temp.linux-x86_64-3.8/build/nipy-0.4.3~rc1
creating build/temp.linux-x86_64-3.8/build/nipy-0.4.3~rc1/lib
creating build/temp.linux-x86_64-3.8/build/nipy-0.4.3~rc1/lib/fff
creating build/temp.linux-x86_64-3.8/build/nipy-0.4.3~rc1/lib/fff_python_wrapper
creating build/temp.linux-x86_64-3.8/build/nipy-0.4.3~rc1/lib/lapack_lite
compile options: '-I/usr/lib/python3/dist-packages/numpy/core/include -Inipy/algorithms/registration -Inipy/algorithms/slicetiming -Inipy/algorithms/segmentation -Inipy/algorithms/statistics -I/build/nipy-0.4.3~rc1/lib/fff -I/build/nipy-0.4.3~rc1/lib/fff_python_wrapper -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.8 -c'
x86_64-linux-gnu-gcc: /build/nipy-0.4.3~rc1/lib/fff/fff_array.c
x86_64-linux-gnu-gcc: /build/nipy-0.4.3~rc1/lib/fff/fff_blas.c
x86_64-linux-gnu-gcc: /build/nipy-0.4.3~rc1/lib/fff/fff_gen_stats.c
x86_64-linux-gnu-gcc: /build/nipy-0.4.3~rc1/lib/fff/fff_base.c
x86_64-linux-gnu-gcc: /build/nipy-0.4.3~rc1/lib/fff/fff_glm_twolevel.c
x86_64-linux-gnu-gcc: /build/nipy-0.4.3~rc1/lib/fff/fff_glm_kalman.c
x86_64-linux-gnu-gcc: /build/nipy-0.4.3~rc1/lib/fff/fff_lapack.c
x86_64-linux-gnu-gcc: /build/nipy-0.4.3~rc1/lib/fff/fff_matrix.c
x86_64-linux-gnu-gcc: /build/nipy-0.4.3~rc1/lib/fff/fff_onesample_stat.c
x86_64-linux-gnu-gcc: /build/nipy-0.4.3~rc1/lib/fff/fff_routines.c
x86_64-linux-gnu-gcc: /build/nipy-0.4.3~rc1/lib/fff/fff_specfun.c
/build/nipy-0.4.3~rc1/lib/fff/fff_lapack.c: In function 'fff_lapack_dgetrf':
/build/nipy-0.4.3~rc1/lib/fff/fff_lapack.c:59:20: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
59 | (ipiv->dimX != FFF_MIN(m,n)) ||
| ^~
/build/nipy-0.4.3~rc1/lib/fff/fff_lapack.c: In function 'fff_lapack_dgeqrf':
/build/nipy-0.4.3~rc1/lib/fff/fff_lapack.c:82:19: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
82 | if ( (tau->size != FFF_MIN(m,n)) ||
| ^~
/build/nipy-0.4.3~rc1/lib/fff/fff_lapack.c: In function 'fff_lapack_dgesdd':
/build/nipy-0.4.3~rc1/lib/fff/fff_lapack.c:136:17: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
136 | if ( U->size1 != m)
| ^~
/build/nipy-0.4.3~rc1/lib/fff/fff_lapack.c:138:18: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
138 | if ( Vt->size1 != n)
| ^~
/build/nipy-0.4.3~rc1/lib/fff/fff_lapack.c:140:19: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
140 | if ( Aux->size1 != dmax)
| ^~
/build/nipy-0.4.3~rc1/lib/fff/fff_lapack.c:142:17: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
142 | if ( (s->size != dmin) ||
| ^~
/build/nipy-0.4.3~rc1/lib/fff/fff_lapack.c:147:21: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
147 | (iwork->dimX != 8*dmin) ||
| ^~
x86_64-linux-gnu-gcc: /build/nipy-0.4.3~rc1/lib/fff/fff_twosample_stat.c
x86_64-linux-gnu-gcc: /build/nipy-0.4.3~rc1/lib/fff/fff_vector.c
x86_64-linux-gnu-gcc: /build/nipy-0.4.3~rc1/lib/fff_python_wrapper/fffpy.c
x86_64-linux-gnu-gcc: /build/nipy-0.4.3~rc1/lib/lapack_lite/blas_lite.c
/build/nipy-0.4.3~rc1/lib/fff/fff_matrix.c: In function 'fff_matrix_transpose':
/build/nipy-0.4.3~rc1/lib/fff/fff_matrix.c:264:20: warning: variable 'rB' set but not used [-Wunused-but-set-variable]
264 | size_t i, j, rA, rB;
| ^~
x86_64-linux-gnu-gcc: /build/nipy-0.4.3~rc1/lib/lapack_lite/dlamch.c
x86_64-linux-gnu-gcc: /build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c
/build/nipy-0.4.3~rc1/lib/fff/fff_blas.c: In function 'fff_blas_ddot':
/build/nipy-0.4.3~rc1/lib/fff/fff_blas.c:97:10: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'const long unsigned int'} [-Wsign-compare]
97 | if ( n != y->size )
| ^~
/build/nipy-0.4.3~rc1/lib/fff/fff_blas.c: In function 'fff_blas_dswap':
/build/nipy-0.4.3~rc1/lib/fff/fff_blas.c:142:10: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
142 | if ( n != y->size )
| ^~
/build/nipy-0.4.3~rc1/lib/fff/fff_blas.c: In function 'fff_blas_dcopy':
/build/nipy-0.4.3~rc1/lib/fff/fff_blas.c:155:10: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
155 | if ( n != y->size )
| ^~
/build/nipy-0.4.3~rc1/lib/fff/fff_blas.c: In function 'fff_blas_daxpy':
/build/nipy-0.4.3~rc1/lib/fff/fff_blas.c:168:10: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
168 | if ( n != y->size )
| ^~
/build/nipy-0.4.3~rc1/lib/fff/fff_blas.c: In function 'fff_blas_drot':
/build/nipy-0.4.3~rc1/lib/fff/fff_blas.c:202:10: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
202 | if ( n != y->size )
| ^~
/build/nipy-0.4.3~rc1/lib/fff/fff_blas.c: In function 'fff_blas_drotm':
/build/nipy-0.4.3~rc1/lib/fff/fff_blas.c:224:10: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
224 | if ( n != y->size )
| ^~
x86_64-linux-gnu-gcc: /build/nipy-0.4.3~rc1/lib/lapack_lite/f2c_lite.c
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlamch.c: In function 'dlamc4_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlamch.c:720:13: warning: variable 'i__1' set but not used [-Wunused-but-set-variable]
720 | integer i__1;
| ^~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlamch.c: In function 'dlamc5_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlamch.c:834:13: warning: variable 'i__1' set but not used [-Wunused-but-set-variable]
834 | integer i__1;
| ^~~~
In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
from /build/nipy-0.4.3~rc1/lib/fff_python_wrapper/fffpy.h:2,
from /build/nipy-0.4.3~rc1/lib/fff_python_wrapper/fffpy.c:1:
/usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
/build/nipy-0.4.3~rc1/lib/fff_python_wrapper/fffpy.c: In function 'fffpy_import_array':
/build/nipy-0.4.3~rc1/lib/fff_python_wrapper/fffpy.c:17:3: warning: returning 'void *' from a function with return type 'IMP_OUT' {aka 'int'} makes integer from pointer without a cast [-Wint-conversion]
17 | import_array();
| ^~~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/fff_python_wrapper/fffpy.c: In function '_fff_vector_new_from_buffer':
/build/nipy-0.4.3~rc1/lib/fff_python_wrapper/fffpy.c:68:40: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
68 | if ((type == NPY_DOUBLE) && (itemsize==sizeof_double)) {
| ^~
/build/nipy-0.4.3~rc1/lib/fff_python_wrapper/fffpy.c: In function 'fffpy_multi_iterator_delete':
/build/nipy-0.4.3~rc1/lib/fff_python_wrapper/fffpy.c:591:13: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare]
591 | for(i=0; i<thisone->narr; i++)
| ^
/build/nipy-0.4.3~rc1/lib/fff_python_wrapper/fffpy.c: In function 'fffpy_multi_iterator_update':
/build/nipy-0.4.3~rc1/lib/fff_python_wrapper/fffpy.c:603:13: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare]
603 | for(i=0; i<thisone->narr; i++)
| ^
/build/nipy-0.4.3~rc1/lib/fff_python_wrapper/fffpy.c: In function 'fffpy_multi_iterator_reset':
/build/nipy-0.4.3~rc1/lib/fff_python_wrapper/fffpy.c:614:13: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare]
614 | for(i=0; i<thisone->narr; i++)
| ^
/build/nipy-0.4.3~rc1/lib/fff_python_wrapper/fffpy.c: In function 'fffpy_import_array':
/build/nipy-0.4.3~rc1/lib/fff_python_wrapper/fffpy.c:18:1: warning: control reaches end of non-void function [-Wreturn-type]
18 | }
| ^
/build/nipy-0.4.3~rc1/lib/lapack_lite/blas_lite.c: In function 'dgemm_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/blas_lite.c:607:57: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
607 | if (*m == 0 || *n == 0 || (*alpha == 0. || *k == 0) && *beta == 1.) {
| ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/blas_lite.c:419:31: warning: variable 'ncola' set but not used [-Wunused-but-set-variable]
419 | static integer i__, j, l, ncola;
| ^~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/blas_lite.c: In function 'dgemv_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/blas_lite.c:909:44: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
909 | if (*m == 0 || *n == 0 || *alpha == 0. && *beta == 1.) {
| ~~~~~~~~~~~~~^~~~~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/blas_lite.c: In function 'drotmg_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/blas_lite.c:1655:18: warning: variable 'igo_fmt' set but not used [-Wunused-but-set-variable]
1655 | static char *igo_fmt;
| ^~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/blas_lite.c: In function 'dsymm_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/blas_lite.c:2266:44: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
2266 | if (*m == 0 || *n == 0 || *alpha == 0. && *beta == 1.) {
| ~~~~~~~~~~~~~^~~~~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/blas_lite.c: In function 'dsymv_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/blas_lite.c:2548:33: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
2548 | if (*n == 0 || *alpha == 0. && *beta == 1.) {
| ~~~~~~~~~~~~~^~~~~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/blas_lite.c: In function 'dsyr2k_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/blas_lite.c:3363:46: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
3363 | if (*n == 0 || (*alpha == 0. || *k == 0) && *beta == 1.) {
| ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/blas_lite.c: In function 'dsyrk_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/blas_lite.c:3719:46: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
3719 | if (*n == 0 || (*alpha == 0. || *k == 0) && *beta == 1.) {
| ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/blas_lite.c: In function 'lsame_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/blas_lite.c:5588:18: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
5588 | if (inta >= 129 && inta <= 137 || inta >= 145 && inta <= 153 || inta
| ~~~~~~~~~~~~^~~~~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/blas_lite.c:5589:10: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
5588 | if (inta >= 129 && inta <= 137 || inta >= 145 && inta <= 153 || inta
| ~~~~
5589 | >= 162 && inta <= 169) {
| ~~~~~~~^~~~~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/blas_lite.c:5592:18: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
5592 | if (intb >= 129 && intb <= 137 || intb >= 145 && intb <= 153 || intb
| ~~~~~~~~~~~~^~~~~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/blas_lite.c:5593:10: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
5592 | if (intb >= 129 && intb <= 137 || intb >= 145 && intb <= 153 || intb
| ~~~~
5593 | >= 162 && intb <= 169) {
| ~~~~~~~^~~~~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c: In function 'dbdsdc_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:274:40: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
274 | } else if (*ldu < 1 || icompq == 2 && *ldu < *n) {
| ~~~~~~~~~~~~^~~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:276:41: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
276 | } else if (*ldvt < 1 || icompq == 2 && *ldvt < *n) {
| ~~~~~~~~~~~~^~~~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c: In function 'dbdsqr_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:768:27: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
768 | } else if (*ncvt == 0 && *ldvt < 1 || *ncvt > 0 && *ldvt < max(1,*n)) {
| ~~~~~~~~~~~^~~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:772:26: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
772 | } else if (*ncc == 0 && *ldc < 1 || *ncc > 0 && *ldc < max(1,*n)) {
| ~~~~~~~~~~^~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:1031:22: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
1031 | d__1)) || tol < 0. && (d__3 = e[m - 1], abs(d__3)) <= thresh)
| ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:1067:17: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
1067 | ) || tol < 0. && (d__3 = e[ll], abs(d__3)) <= thresh) {
| ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c: In function 'dgeev_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:2840:36: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
2840 | } else if (*ldvl < 1 || wantvl && *ldvl < *n) {
| ~~~~~~~^~~~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:2842:36: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
2842 | } else if (*ldvr < 1 || wantvr && *ldvr < *n) {
| ~~~~~~~^~~~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c: In function 'dgesdd_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:5337:35: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
5337 | } else if (*ldu < 1 || wntqas && *ldu < *m || wntqo && *m < *n && *ldu < *
| ~~~~~~~^~~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:5337:68: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
5337 | } else if (*ldu < 1 || wntqas && *ldu < *m || wntqo && *m < *n && *ldu < *
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~
5338 | m) {
| ~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:5340:35: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
5340 | } else if (*ldvt < 1 || wntqa && *ldvt < *n || wntqs && *ldvt < minmn ||
| ~~~~~~^~~~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:5340:58: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
5340 | } else if (*ldvt < 1 || wntqa && *ldvt < *n || wntqs && *ldvt < minmn ||
| ~~~~~~^~~~~~~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:5341:24: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
5341 | wntqo && *m >= *n && *ldvt < *n) {
| ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c: In function 'dhseqr_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:7768:34: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
7768 | } else if (*ldz < 1 || wantz && *ldz < max(1,*n)) {
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c: In function 'dlaexc_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:13223:8: warning: suggest parentheses around '+' inside '<<' [-Wparentheses]
13223 | (*n1 + 1 << 2) - 5], &c__4, &d__[(*n1 + 1 << 2) - 4], &c__4, &
| ~~~~^~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:13223:41: warning: suggest parentheses around '+' inside '<<' [-Wparentheses]
13223 | (*n1 + 1 << 2) - 5], &c__4, &d__[(*n1 + 1 << 2) - 4], &c__4, &
| ~~~~^~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c: In function 'dlaqr0_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:17755:45: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
17755 | if (ld == 0 || ld * 100 <= nw * nibble && kbot - ktop + 1 > min(
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c: In function 'dlaqr4_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:20024:45: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
20024 | if (ld == 0 || ld * 100 <= nw * nibble && kbot - ktop + 1 > min(
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c: In function 'dlaqr5_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:20637:45: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
20637 | h__[k + 3 + (k + 1) * h_dim1] == 0. && h__[k + 3
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
20638 | + (k + 2) * h_dim1] == 0.)) {
| ~~~~~~~~~~~~~~~~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c: In function 'dlascl_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:23732:37: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
23732 | } else if (*n < 0 || itype == 4 && *n != *m || itype == 5 && *n != *m) {
| ~~~~~~~~~~~^~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:23732:63: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
23732 | } else if (*n < 0 || itype == 4 && *n != *m || itype == 5 && *n != *m) {
| ~~~~~~~~~~~^~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:23744:69: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
23744 | if (*ku < 0 || *ku > max(i__1,0) || (itype == 4 || itype == 5) &&
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~
23745 | *kl != *ku) {
| ~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:23747:28: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
23747 | } else if (itype == 4 && *lda < *kl + 1 || itype == 5 && *lda < *
| ~~~~~~~~~~~^~~~~~~~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:23748:28: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
23748 | ku + 1 || itype == 6 && *lda < (*kl << 1) + *ku + 1) {
| ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c: In function 'dlasdq_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:28444:27: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
28444 | } else if (*ncvt == 0 && *ldvt < 1 || *ncvt > 0 && *ldvt < max(1,*n)) {
| ~~~~~~~~~~~^~~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:28448:26: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
28448 | } else if (*ncc == 0 && *ldc < 1 || *ncc > 0 && *ldc < max(1,*n)) {
| ~~~~~~~~~~^~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c: In function 'dlasq2_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:29218:15: warning: suggest parentheses around '-' inside '<<' [-Wparentheses]
29218 | i__1 = *n - 1 << 1;
| ~~~^~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:29297:12: warning: suggest parentheses around '+' inside '<<' [-Wparentheses]
29297 | ipn4 = i0 + n0 << 2;
| ~~~^~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:29298:17: warning: suggest parentheses around '-' inside '<<' [-Wparentheses]
29298 | i__1 = i0 + n0 - 1 << 1;
| ~~~~~~~~^~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:29318:16: warning: suggest parentheses around '-' inside '<<' [-Wparentheses]
29318 | for (i4 = (n0 - 1 << 2) + pp; i4 >= i__1; i4 += -4) {
| ~~~^~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:29332:13: warning: suggest parentheses around '-' inside '<<' [-Wparentheses]
29332 | i__1 = (n0 - 1 << 2) + pp;
| ~~~^~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:29386:15: warning: suggest parentheses around '-' inside '<<' [-Wparentheses]
29386 | ndiv = n0 - i0 << 1;
| ~~~^~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:29490:17: warning: suggest parentheses around '-' inside '<<' [-Wparentheses]
29490 | i__3 = n0 - 3 << 2;
| ~~~^~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c: In function 'dlasq5_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:29661:17: warning: suggest parentheses around '-' inside '<<' [-Wparentheses]
29661 | i__1 = *n0 - 3 << 2;
| ~~~~^~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:29674:17: warning: suggest parentheses around '-' inside '<<' [-Wparentheses]
29674 | i__1 = *n0 - 3 << 2;
| ~~~~^~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:29692:12: warning: suggest parentheses around '-' inside '<<' [-Wparentheses]
29692 | j4 = (*n0 - 2 << 2) - *pp;
| ~~~~^~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:29712:17: warning: suggest parentheses around '-' inside '<<' [-Wparentheses]
29712 | i__1 = *n0 - 3 << 2;
| ~~~~^~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:29728:17: warning: suggest parentheses around '-' inside '<<' [-Wparentheses]
29728 | i__1 = *n0 - 3 << 2;
| ~~~~^~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:29749:12: warning: suggest parentheses around '-' inside '<<' [-Wparentheses]
29749 | j4 = (*n0 - 2 << 2) - *pp;
| ~~~~^~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c: In function 'dlasq6_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:29863:13: warning: suggest parentheses around '-' inside '<<' [-Wparentheses]
29863 | i__1 = *n0 - 3 << 2;
| ~~~~^~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:29887:13: warning: suggest parentheses around '-' inside '<<' [-Wparentheses]
29887 | i__1 = *n0 - 3 << 2;
| ~~~~^~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:29916:15: warning: suggest parentheses around '-' inside '<<' [-Wparentheses]
29916 | j4 = (*n0 - 2 << 2) - *pp;
| ~~~~^~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c: In function 'dlazq3_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:32091:17: warning: suggest parentheses around '+' inside '<<' [-Wparentheses]
32091 | ipn4 = *i0 + *n0 << 2;
| ~~~~^~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:32092:23: warning: suggest parentheses around '-' inside '<<' [-Wparentheses]
32092 | i__1 = *i0 + *n0 - 1 << 1;
| ~~~~~~~~~~^~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:32159:53: warning: suggest parentheses around '-' inside '<<' [-Wparentheses]
32159 | } else if (*dmin__ < 0. && *dmin1 > 0. && z__[(*n0 - 1 << 2) - *pp] <
| ~~~~^~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:32164:15: warning: suggest parentheses around '-' inside '<<' [-Wparentheses]
32164 | z__[(*n0 - 1 << 2) - *pp + 2] = 0.;
| ~~~~^~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c: In function 'dorgbr_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:32887:32: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
32887 | } else if (*n < 0 || wantq && (*n > *m || *n < min(*m,*k)) || ! wantq && (
| ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:32887:75: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
32887 | } else if (*n < 0 || wantq && (*n > *m || *n < min(*m,*k)) || ! wantq && (
| ~~~~~~~~^~~~
32888 | *m > *n || *m < min(*n,*k))) {
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c: In function 'dorm2l_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:34048:14: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
34048 | if (left && notran || ! left && ! notran) {
| ~~~~~^~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c: In function 'dorm2r_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:34249:14: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
34249 | if (left && ! notran || ! left && notran) {
| ~~~~~^~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c: In function 'dormbr_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:34489:13: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
34489 | if (applyq && *lda < max(1,nq) || ! applyq && *lda < max(i__1,i__2)) {
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c: In function 'dorml2_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:34786:14: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
34786 | if (left && notran || ! left && ! notran) {
| ~~~~~^~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c: In function 'dormlq_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:35078:11: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
35078 | if (left && notran || ! left && ! notran) {
| ~~~~~^~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c: In function 'dormql_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:35391:11: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
35391 | if (left && notran || ! left && ! notran) {
| ~~~~~^~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c: In function 'dormqr_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:35689:11: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
35689 | if (left && ! notran || ! left && notran) {
| ~~~~~^~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c: In function 'dstedc_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:36623:39: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
36623 | } else if (*ldz < 1 || icompz > 0 && *ldz < max(1,*n)) {
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:36638:17: warning: suggest parentheses around '-' inside '<<' [-Wparentheses]
36638 | lwmin = *n - 1 << 1;
| ~~~^~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c: In function 'dsteqr_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:37043:39: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
37043 | } else if (*ldz < 1 || icompz > 0 && *ldz < max(1,*n)) {
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c: In function 'dtrevc_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:39115:35: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
39115 | } else if (*ldvl < 1 || leftv && *ldvl < *n) {
| ~~~~~~^~~~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:39117:36: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
39117 | } else if (*ldvr < 1 || rightv && *ldvr < *n) {
| ~~~~~~~^~~~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c: In function 'dtrexc_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:40230:34: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
40230 | } else if (*ldq < 1 || wantq && *ldq < max(1,*n)) {
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c: In function 'ilaenv_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:40822:16: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
40822 | if (ic >= 129 && ic <= 137 || ic >= 145 && ic <= 153 || ic >= 162 &&
| ~~~~~~~~~~^~~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:40822:68: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
40822 | if (ic >= 129 && ic <= 137 || ic >= 145 && ic <= 153 || ic >= 162 &&
| ~~~~~~~~~~^~
40823 | ic <= 169) {
| ~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:40827:17: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
40827 | if (ic >= 129 && ic <= 137 || ic >= 145 && ic <= 153 || ic >=
| ~~~~~~~~~~^~~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:40828:8: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
40827 | if (ic >= 129 && ic <= 137 || ic >= 145 && ic <= 153 || ic >=
| ~~~~~
40828 | 162 && ic <= 169) {
| ~~~~^~~~~~~~~~~~
x86_64-linux-gnu-gcc-ar: adding 18 object files to build/temp.linux-x86_64-3.8/libcstat.a
running build_ext
customize UnixCCompiler
customize UnixCCompiler using MyBuildExt
building 'nipy.algorithms.registration._registration' extension
compiling C sources
C compiler: x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/build/nipy-0.4.3~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC
creating build/temp.linux-x86_64-3.8/build/src.linux-x86_64-3.8
creating build/temp.linux-x86_64-3.8/build/src.linux-x86_64-3.8/nipy
creating build/temp.linux-x86_64-3.8/build/src.linux-x86_64-3.8/nipy/algorithms
creating build/temp.linux-x86_64-3.8/build/src.linux-x86_64-3.8/nipy/algorithms/registration
creating build/temp.linux-x86_64-3.8/nipy
creating build/temp.linux-x86_64-3.8/nipy/algorithms
creating build/temp.linux-x86_64-3.8/nipy/algorithms/registration
compile options: '-I/usr/lib/python3/dist-packages/numpy/core/include -Inipy/algorithms/registration -Inipy/algorithms/slicetiming -Inipy/algorithms/segmentation -Inipy/algorithms/statistics -I/build/nipy-0.4.3~rc1/lib/fff -I/build/nipy-0.4.3~rc1/lib/fff_python_wrapper -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.8 -c'
x86_64-linux-gnu-gcc: build/src.linux-x86_64-3.8/nipy/algorithms/registration/_registration.c
x86_64-linux-gnu-gcc: nipy/algorithms/registration/joint_histogram.c
x86_64-linux-gnu-gcc: nipy/algorithms/registration/wichmann_prng.c
x86_64-linux-gnu-gcc: nipy/algorithms/registration/cubic_spline.c
x86_64-linux-gnu-gcc: nipy/algorithms/registration/polyaffine.c
In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
from nipy/algorithms/registration/joint_histogram.h:27,
from nipy/algorithms/registration/joint_histogram.c:1:
/usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
nipy/algorithms/registration/joint_histogram.c: In function 'L1_moments':
nipy/algorithms/registration/joint_histogram.c:358:14: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
358 | for (i=0; i<size; i++, buf+=offset)
| ^
nipy/algorithms/registration/joint_histogram.c:398:13: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
398 | if (med < size) {
| ^
nipy/algorithms/registration/joint_histogram.c:400:20: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
400 | for (i=med; i<size; i ++, buf += offset)
| ^
In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
from nipy/algorithms/registration/polyaffine.h:16,
from nipy/algorithms/registration/polyaffine.c:1:
/usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
from nipy/algorithms/registration/cubic_spline.h:35,
from nipy/algorithms/registration/cubic_spline.c:1:
/usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
nipy/algorithms/registration/cubic_spline.c: In function '_cubic_spline_transform1d':
nipy/algorithms/registration/cubic_spline.c:107:14: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
107 | for (k=1; k<dim; k++) {
| ^
nipy/algorithms/registration/cubic_spline.c:114:14: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
114 | for (k=2; k<dim; k++) {
| ^
nipy/algorithms/registration/cubic_spline.c:131:14: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
131 | for (k=1; k<dim; k++) {
| ^
nipy/algorithms/registration/cubic_spline.c:144:14: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
144 | for (k=1; k<dim; k++) {
| ^
nipy/algorithms/registration/cubic_spline.c: In function 'cubic_spline_transform':
nipy/algorithms/registration/cubic_spline.c:205:19: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare]
205 | for(axis=0; axis<res->nd; axis++) {
| ^
nipy/algorithms/registration/cubic_spline.c:215:19: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare]
215 | for(axis=0; axis<res->nd; axis++)
| ^
nipy/algorithms/registration/cubic_spline.c: In function '_mirrored_position':
nipy/algorithms/registration/cubic_spline.c:634:14: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
634 | else if (x > ddim)
| ^
nipy/algorithms/registration/cubic_spline.c: In function '_mirror_grid_neighbors':
nipy/algorithms/registration/cubic_spline.c:690:23: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
690 | if ((*px>=3) && (*px<=3*ddim)) {
| ^~
nipy/algorithms/registration/cubic_spline.c: In function '_neighbors_zero_outside':
nipy/algorithms/registration/cubic_spline.c:717:14: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
717 | if (*px>dim) { /* ddim<=x<dim, px=dim+1 */
| ^
In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
from build/src.linux-x86_64-3.8/nipy/algorithms/registration/_registration.c:611:
/usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/build/nipy-0.4.3~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.8/build/src.linux-x86_64-3.8/nipy/algorithms/registration/_registration.o build/temp.linux-x86_64-3.8/nipy/algorithms/registration/joint_histogram.o build/temp.linux-x86_64-3.8/nipy/algorithms/registration/wichmann_prng.o build/temp.linux-x86_64-3.8/nipy/algorithms/registration/cubic_spline.o build/temp.linux-x86_64-3.8/nipy/algorithms/registration/polyaffine.o -Lbuild/temp.linux-x86_64-3.8 -o /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/registration/_registration.cpython-38-x86_64-linux-gnu.so
building 'nipy.algorithms.segmentation._segmentation' extension
compiling C sources
C compiler: x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/build/nipy-0.4.3~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC
creating build/temp.linux-x86_64-3.8/build/src.linux-x86_64-3.8/nipy/algorithms/segmentation
creating build/temp.linux-x86_64-3.8/nipy/algorithms/segmentation
compile options: '-I/usr/lib/python3/dist-packages/numpy/core/include -Inipy/algorithms/registration -Inipy/algorithms/slicetiming -Inipy/algorithms/segmentation -Inipy/algorithms/statistics -I/build/nipy-0.4.3~rc1/lib/fff -I/build/nipy-0.4.3~rc1/lib/fff_python_wrapper -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.8 -c'
x86_64-linux-gnu-gcc: build/src.linux-x86_64-3.8/nipy/algorithms/segmentation/_segmentation.c
x86_64-linux-gnu-gcc: nipy/algorithms/segmentation/mrf.c
In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
from nipy/algorithms/segmentation/mrf.h:16,
from nipy/algorithms/segmentation/mrf.c:1:
/usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
from build/src.linux-x86_64-3.8/nipy/algorithms/segmentation/_segmentation.c:611:
/usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/build/nipy-0.4.3~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.8/build/src.linux-x86_64-3.8/nipy/algorithms/segmentation/_segmentation.o build/temp.linux-x86_64-3.8/nipy/algorithms/segmentation/mrf.o -Lbuild/temp.linux-x86_64-3.8 -o /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/segmentation/_segmentation.cpython-38-x86_64-linux-gnu.so
building 'nipy.algorithms.statistics.intvol' extension
compiling C sources
C compiler: x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/build/nipy-0.4.3~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC
creating build/temp.linux-x86_64-3.8/build/src.linux-x86_64-3.8/nipy/algorithms/statistics
compile options: '-I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/lib/python3/dist-packages/numpy/core/include -Inipy/algorithms/registration -Inipy/algorithms/slicetiming -Inipy/algorithms/segmentation -Inipy/algorithms/statistics -I/build/nipy-0.4.3~rc1/lib/fff -I/build/nipy-0.4.3~rc1/lib/fff_python_wrapper -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.8 -c'
x86_64-linux-gnu-gcc: build/src.linux-x86_64-3.8/nipy/algorithms/statistics/intvol.c
In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
from build/src.linux-x86_64-3.8/nipy/algorithms/statistics/intvol.c:610:
/usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/build/nipy-0.4.3~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.8/build/src.linux-x86_64-3.8/nipy/algorithms/statistics/intvol.o -Lbuild/temp.linux-x86_64-3.8 -o /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/statistics/intvol.cpython-38-x86_64-linux-gnu.so
building 'nipy.algorithms.statistics.histogram' extension
compiling C sources
C compiler: x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/build/nipy-0.4.3~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC
compile options: '-I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/lib/python3/dist-packages/numpy/core/include -Inipy/algorithms/registration -Inipy/algorithms/slicetiming -Inipy/algorithms/segmentation -Inipy/algorithms/statistics -I/build/nipy-0.4.3~rc1/lib/fff -I/build/nipy-0.4.3~rc1/lib/fff_python_wrapper -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.8 -c'
x86_64-linux-gnu-gcc: build/src.linux-x86_64-3.8/nipy/algorithms/statistics/histogram.c
In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
from build/src.linux-x86_64-3.8/nipy/algorithms/statistics/histogram.c:610:
/usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/build/nipy-0.4.3~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.8/build/src.linux-x86_64-3.8/nipy/algorithms/statistics/histogram.o -Lbuild/temp.linux-x86_64-3.8 -o /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/statistics/histogram.cpython-38-x86_64-linux-gnu.so
building 'nipy.algorithms.statistics._quantile' extension
compiling C sources
C compiler: x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/build/nipy-0.4.3~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC
creating build/temp.linux-x86_64-3.8/nipy/algorithms/statistics
compile options: '-I/usr/lib/python3/dist-packages/numpy/core/include -Inipy/algorithms/registration -Inipy/algorithms/slicetiming -Inipy/algorithms/segmentation -Inipy/algorithms/statistics -I/build/nipy-0.4.3~rc1/lib/fff -I/build/nipy-0.4.3~rc1/lib/fff_python_wrapper -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.8 -c'
x86_64-linux-gnu-gcc: build/src.linux-x86_64-3.8/nipy/algorithms/statistics/_quantile.c
x86_64-linux-gnu-gcc: nipy/algorithms/statistics/quantile.c
In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
from nipy/algorithms/statistics/quantile.h:9,
from nipy/algorithms/statistics/quantile.c:1:
/usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:21,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
from nipy/algorithms/statistics/quantile.h:9,
from nipy/algorithms/statistics/quantile.c:1:
/usr/lib/python3/dist-packages/numpy/core/include/numpy/__multiarray_api.h:1463:1: warning: '_import_array' defined but not used [-Wunused-function]
1463 | _import_array(void)
| ^~~~~~~~~~~~~
In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
from build/src.linux-x86_64-3.8/nipy/algorithms/statistics/_quantile.c:610:
/usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/build/nipy-0.4.3~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.8/build/src.linux-x86_64-3.8/nipy/algorithms/statistics/_quantile.o build/temp.linux-x86_64-3.8/nipy/algorithms/statistics/quantile.o -Lbuild/temp.linux-x86_64-3.8 -o /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/statistics/_quantile.cpython-38-x86_64-linux-gnu.so
building 'nipy.algorithms.graph._graph' extension
compiling C sources
C compiler: x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/build/nipy-0.4.3~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC
creating build/temp.linux-x86_64-3.8/nipy/algorithms/graph
compile options: '-I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/lib/python3/dist-packages/numpy/core/include -Inipy/algorithms/registration -Inipy/algorithms/slicetiming -Inipy/algorithms/segmentation -Inipy/algorithms/statistics -I/build/nipy-0.4.3~rc1/lib/fff -I/build/nipy-0.4.3~rc1/lib/fff_python_wrapper -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.8 -c'
x86_64-linux-gnu-gcc: nipy/algorithms/graph/_graph.c
In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
from nipy/algorithms/graph/_graph.c:256:
/usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:21,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
from nipy/algorithms/graph/_graph.c:256:
/usr/lib/python3/dist-packages/numpy/core/include/numpy/__multiarray_api.h:1463:1: warning: '_import_array' defined but not used [-Wunused-function]
1463 | _import_array(void)
| ^~~~~~~~~~~~~
x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/build/nipy-0.4.3~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.8/nipy/algorithms/graph/_graph.o -Lbuild/temp.linux-x86_64-3.8 -o /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/algorithms/graph/_graph.cpython-38-x86_64-linux-gnu.so
building 'nipy.labs.bindings.linalg' extension
compiling C sources
C compiler: x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/build/nipy-0.4.3~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC
creating build/temp.linux-x86_64-3.8/build/src.linux-x86_64-3.8/nipy/labs
creating build/temp.linux-x86_64-3.8/build/src.linux-x86_64-3.8/nipy/labs/bindings
compile options: '-I/usr/lib/python3/dist-packages/numpy/core/include -Inipy/algorithms/registration -Inipy/algorithms/slicetiming -Inipy/algorithms/segmentation -Inipy/algorithms/statistics -I/build/nipy-0.4.3~rc1/lib/fff -I/build/nipy-0.4.3~rc1/lib/fff_python_wrapper -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.8 -c'
x86_64-linux-gnu-gcc: build/src.linux-x86_64-3.8/nipy/labs/bindings/linalg.c
In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
from build/src.linux-x86_64-3.8/nipy/labs/bindings/linalg.c:610:
/usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/build/nipy-0.4.3~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.8/build/src.linux-x86_64-3.8/nipy/labs/bindings/linalg.o -Lbuild/temp.linux-x86_64-3.8 -lcstat -o /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/labs/bindings/linalg.cpython-38-x86_64-linux-gnu.so
building 'nipy.labs.bindings.array' extension
compiling C sources
C compiler: x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/build/nipy-0.4.3~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC
compile options: '-I/usr/lib/python3/dist-packages/numpy/core/include -Inipy/algorithms/registration -Inipy/algorithms/slicetiming -Inipy/algorithms/segmentation -Inipy/algorithms/statistics -I/build/nipy-0.4.3~rc1/lib/fff -I/build/nipy-0.4.3~rc1/lib/fff_python_wrapper -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.8 -c'
x86_64-linux-gnu-gcc: build/src.linux-x86_64-3.8/nipy/labs/bindings/array.c
In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
from build/src.linux-x86_64-3.8/nipy/labs/bindings/array.c:610:
/usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/build/nipy-0.4.3~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.8/build/src.linux-x86_64-3.8/nipy/labs/bindings/array.o -Lbuild/temp.linux-x86_64-3.8 -lcstat -o /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/labs/bindings/array.cpython-38-x86_64-linux-gnu.so
building 'nipy.labs.bindings.wrapper' extension
compiling C sources
C compiler: x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/build/nipy-0.4.3~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC
compile options: '-I/usr/lib/python3/dist-packages/numpy/core/include -Inipy/algorithms/registration -Inipy/algorithms/slicetiming -Inipy/algorithms/segmentation -Inipy/algorithms/statistics -I/build/nipy-0.4.3~rc1/lib/fff -I/build/nipy-0.4.3~rc1/lib/fff_python_wrapper -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.8 -c'
x86_64-linux-gnu-gcc: build/src.linux-x86_64-3.8/nipy/labs/bindings/wrapper.c
In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
from build/src.linux-x86_64-3.8/nipy/labs/bindings/wrapper.c:610:
/usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
build/src.linux-x86_64-3.8/nipy/labs/bindings/wrapper.c: In function '__pyx_pf_4nipy_4labs_8bindings_7wrapper_12pass_vector_via_iterator':
build/src.linux-x86_64-3.8/nipy/labs/bindings/wrapper.c:2950:40: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
2950 | __pyx_t_4 = ((__pyx_v_multi->index < __pyx_v_niters) != 0);
| ^
x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/build/nipy-0.4.3~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.8/build/src.linux-x86_64-3.8/nipy/labs/bindings/wrapper.o -Lbuild/temp.linux-x86_64-3.8 -lcstat -o /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/labs/bindings/wrapper.cpython-38-x86_64-linux-gnu.so
building 'nipy.labs.glm.kalman' extension
compiling C sources
C compiler: x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/build/nipy-0.4.3~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC
creating build/temp.linux-x86_64-3.8/build/src.linux-x86_64-3.8/nipy/labs/glm
compile options: '-I/usr/lib/python3/dist-packages/numpy/core/include -Inipy/algorithms/registration -Inipy/algorithms/slicetiming -Inipy/algorithms/segmentation -Inipy/algorithms/statistics -I/build/nipy-0.4.3~rc1/lib/fff -I/build/nipy-0.4.3~rc1/lib/fff_python_wrapper -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.8 -c'
x86_64-linux-gnu-gcc: build/src.linux-x86_64-3.8/nipy/labs/glm/kalman.c
In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
from build/src.linux-x86_64-3.8/nipy/labs/glm/kalman.c:610:
/usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/build/nipy-0.4.3~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.8/build/src.linux-x86_64-3.8/nipy/labs/glm/kalman.o -Lbuild/temp.linux-x86_64-3.8 -lcstat -o /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/labs/glm/kalman.cpython-38-x86_64-linux-gnu.so
building 'nipy.labs.group.onesample' extension
compiling C sources
C compiler: x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/build/nipy-0.4.3~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC
creating build/temp.linux-x86_64-3.8/build/src.linux-x86_64-3.8/nipy/labs/group
compile options: '-I/usr/lib/python3/dist-packages/numpy/core/include -Inipy/algorithms/registration -Inipy/algorithms/slicetiming -Inipy/algorithms/segmentation -Inipy/algorithms/statistics -I/build/nipy-0.4.3~rc1/lib/fff -I/build/nipy-0.4.3~rc1/lib/fff_python_wrapper -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.8 -c'
x86_64-linux-gnu-gcc: build/src.linux-x86_64-3.8/nipy/labs/group/onesample.c
In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
from build/src.linux-x86_64-3.8/nipy/labs/group/onesample.c:610:
/usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/build/nipy-0.4.3~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.8/build/src.linux-x86_64-3.8/nipy/labs/group/onesample.o -Lbuild/temp.linux-x86_64-3.8 -lcstat -o /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/labs/group/onesample.cpython-38-x86_64-linux-gnu.so
building 'nipy.labs.group.twosample' extension
compiling C sources
C compiler: x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/build/nipy-0.4.3~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC
compile options: '-I/usr/lib/python3/dist-packages/numpy/core/include -Inipy/algorithms/registration -Inipy/algorithms/slicetiming -Inipy/algorithms/segmentation -Inipy/algorithms/statistics -I/build/nipy-0.4.3~rc1/lib/fff -I/build/nipy-0.4.3~rc1/lib/fff_python_wrapper -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.8 -c'
x86_64-linux-gnu-gcc: build/src.linux-x86_64-3.8/nipy/labs/group/twosample.c
In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
from build/src.linux-x86_64-3.8/nipy/labs/group/twosample.c:610:
/usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/build/nipy-0.4.3~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.8/build/src.linux-x86_64-3.8/nipy/labs/group/twosample.o -Lbuild/temp.linux-x86_64-3.8 -lcstat -o /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/labs/group/twosample.cpython-38-x86_64-linux-gnu.so
building 'nipy.labs.group.glm_twolevel' extension
compiling C sources
C compiler: x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/build/nipy-0.4.3~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC
compile options: '-I/usr/lib/python3/dist-packages/numpy/core/include -Inipy/algorithms/registration -Inipy/algorithms/slicetiming -Inipy/algorithms/segmentation -Inipy/algorithms/statistics -I/build/nipy-0.4.3~rc1/lib/fff -I/build/nipy-0.4.3~rc1/lib/fff_python_wrapper -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.8 -c'
x86_64-linux-gnu-gcc: build/src.linux-x86_64-3.8/nipy/labs/group/glm_twolevel.c
In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
from build/src.linux-x86_64-3.8/nipy/labs/group/glm_twolevel.c:610:
/usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/build/nipy-0.4.3~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.8/build/src.linux-x86_64-3.8/nipy/labs/group/glm_twolevel.o -Lbuild/temp.linux-x86_64-3.8 -lcstat -o /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/labs/group/glm_twolevel.cpython-38-x86_64-linux-gnu.so
building 'nipy.labs.utils.routines' extension
compiling C sources
C compiler: x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/build/nipy-0.4.3~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC
creating build/temp.linux-x86_64-3.8/build/src.linux-x86_64-3.8/nipy/labs/utils
compile options: '-I/usr/lib/python3/dist-packages/numpy/core/include -Inipy/algorithms/registration -Inipy/algorithms/slicetiming -Inipy/algorithms/segmentation -Inipy/algorithms/statistics -I/build/nipy-0.4.3~rc1/lib/fff -I/build/nipy-0.4.3~rc1/lib/fff_python_wrapper -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.8 -c'
x86_64-linux-gnu-gcc: build/src.linux-x86_64-3.8/nipy/labs/utils/routines.c
In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
from build/src.linux-x86_64-3.8/nipy/labs/utils/routines.c:610:
/usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/build/nipy-0.4.3~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.8/build/src.linux-x86_64-3.8/nipy/labs/utils/routines.o -Lbuild/temp.linux-x86_64-3.8 -lcstat -o /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/labs/utils/routines.cpython-38-x86_64-linux-gnu.so
________________________________________________________________________________
Could not find datasource "nipy/templates" in data path "/usr/share/nipy:/usr/local/share/nipy:/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/.nipy"; Is it possible you have not installed a data package?
You may need the package "nipy-templates"
You can download and install the package from:
http://nipy.org/data-packages/nipy-templates-0.2.tar.gz
Check the instructions in the ``doc/users/install_data.rst`` file in the nipy
source tree, or online at http://nipy.org/nipy/users/install_data.html
If you have the package, have you set the path to the package correctly?
________________________________________________________________________________
Could not find datasource "nipy/data" in data path "/usr/share/nipy:/usr/local/share/nipy:/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/.nipy"; Is it possible you have not installed a data package?
You may need the package "nipy-data"
You can download and install the package from:
http://nipy.org/data-packages/nipy-data-0.2.tar.gz
Check the instructions in the ``doc/users/install_data.rst`` file in the nipy
source tree, or online at http://nipy.org/nipy/users/install_data.html
If you have the package, have you set the path to the package correctly?
running build_scripts
creating build/scripts.linux-x86_64-3.8
copying and adjusting scripts/nipy_diagnose -> build/scripts.linux-x86_64-3.8
copying and adjusting scripts/nipy_3dto4d -> build/scripts.linux-x86_64-3.8
copying and adjusting scripts/nipy_4d_realign -> build/scripts.linux-x86_64-3.8
copying and adjusting scripts/nipy_4dto3d -> build/scripts.linux-x86_64-3.8
copying and adjusting scripts/nipy_tsdiffana -> build/scripts.linux-x86_64-3.8
changing mode of build/scripts.linux-x86_64-3.8/nipy_diagnose from 644 to 755
changing mode of build/scripts.linux-x86_64-3.8/nipy_3dto4d from 644 to 755
changing mode of build/scripts.linux-x86_64-3.8/nipy_4d_realign from 644 to 755
changing mode of build/scripts.linux-x86_64-3.8/nipy_4dto3d from 644 to 755
changing mode of build/scripts.linux-x86_64-3.8/nipy_tsdiffana from 644 to 755
warning: nipy/labs/group/twosample.pyx:158:23: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/group/twosample.pyx:158:28: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/group/twosample.pyx:158:33: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/group/twosample.pyx:158:38: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/group/twosample.pyx:158:42: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/group/twosample.pyx:158:47: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/group/twosample.pyx:158:52: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/group/twosample.pyx:159:17: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/group/twosample.pyx:159:24: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
/usr/lib/python3/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /build/nipy-0.4.3~rc1/nipy/labs/group/glm_twolevel.pyx
tree = Parsing.p_module(s, pxd, full_module_name)
warning: nipy/labs/group/glm_twolevel.pyx:64:20: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/group/glm_twolevel.pyx:64:24: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/group/glm_twolevel.pyx:64:29: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/group/glm_twolevel.pyx:64:33: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/group/glm_twolevel.pyx:65:20: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/group/glm_twolevel.pyx:65:24: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/group/glm_twolevel.pyx:134:20: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/group/glm_twolevel.pyx:134:24: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/group/glm_twolevel.pyx:134:29: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/group/glm_twolevel.pyx:134:33: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/group/glm_twolevel.pyx:134:38: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/group/glm_twolevel.pyx:134:43: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
/usr/lib/python3/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /build/nipy-0.4.3~rc1/nipy/labs/utils/routines.pyx
tree = Parsing.p_module(s, pxd, full_module_name)
warning: nipy/labs/utils/routines.pyx:56:20: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/utils/routines.pyx:56:24: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/utils/routines.pyx:101:20: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/utils/routines.pyx:101:24: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/utils/routines.pyx:101:29: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/utils/routines.pyx:101:37: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/utils/routines.pyx:101:46: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/utils/routines.pyx:166:20: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/utils/routines.pyx:166:27: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/utils/routines.pyx:166:36: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/utils/routines.pyx:166:49: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/utils/routines.pyx:166:53: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/utils/routines.pyx:169:20: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/utils/routines.pyx:169:26: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/utils/routines.pyx:169:30: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/utils/routines.pyx:238:19: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/utils/routines.pyx:238:23: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/utils/routines.pyx:258:19: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/utils/routines.pyx:258:23: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
I: pybuild base:232: /usr/bin/python3 setup.py build
lapack_opt_info:
lapack_mkl_info:
customize UnixCCompiler
libraries mkl_rt not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
openblas_lapack_info:
libraries openblas not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
openblas_clapack_info:
libraries openblas,lapack not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
flame_info:
libraries flame not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
atlas_3_10_threads_info:
Setting PTATLAS=ATLAS
libraries lapack_atlas not found in /usr/local/lib
libraries tatlas,tatlas not found in /usr/local/lib
libraries lapack_atlas not found in /usr/lib
libraries tatlas,tatlas not found in /usr/lib
libraries lapack_atlas not found in /usr/lib/x86_64-linux-gnu
libraries tatlas,tatlas not found in /usr/lib/x86_64-linux-gnu
<class 'numpy.distutils.system_info.atlas_3_10_threads_info'>
NOT AVAILABLE
atlas_3_10_info:
libraries lapack_atlas not found in /usr/local/lib
libraries satlas,satlas not found in /usr/local/lib
libraries lapack_atlas not found in /usr/lib
libraries satlas,satlas not found in /usr/lib
libraries lapack_atlas not found in /usr/lib/x86_64-linux-gnu
libraries satlas,satlas not found in /usr/lib/x86_64-linux-gnu
<class 'numpy.distutils.system_info.atlas_3_10_info'>
NOT AVAILABLE
atlas_threads_info:
Setting PTATLAS=ATLAS
libraries lapack_atlas not found in /usr/local/lib
libraries ptf77blas,ptcblas,atlas not found in /usr/local/lib
libraries lapack_atlas not found in /usr/lib
libraries ptf77blas,ptcblas,atlas not found in /usr/lib
libraries lapack_atlas not found in /usr/lib/x86_64-linux-gnu
libraries ptf77blas,ptcblas,atlas not found in /usr/lib/x86_64-linux-gnu
<class 'numpy.distutils.system_info.atlas_threads_info'>
NOT AVAILABLE
atlas_info:
libraries lapack_atlas not found in /usr/local/lib
libraries f77blas,cblas,atlas not found in /usr/local/lib
libraries lapack_atlas not found in /usr/lib
libraries f77blas,cblas,atlas not found in /usr/lib
libraries lapack_atlas not found in /usr/lib/x86_64-linux-gnu
libraries f77blas,cblas,atlas not found in /usr/lib/x86_64-linux-gnu
<class 'numpy.distutils.system_info.atlas_info'>
NOT AVAILABLE
accelerate_info:
NOT AVAILABLE
lapack_info:
FOUND:
libraries = ['lapack', 'lapack']
library_dirs = ['/usr/lib/x86_64-linux-gnu']
language = f77
blas_opt_info:
blas_mkl_info:
libraries mkl_rt not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
blis_info:
libraries blis not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
openblas_info:
libraries openblas not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
atlas_3_10_blas_threads_info:
Setting PTATLAS=ATLAS
libraries tatlas not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
atlas_3_10_blas_info:
libraries satlas not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
atlas_blas_threads_info:
Setting PTATLAS=ATLAS
libraries ptf77blas,ptcblas,atlas not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
atlas_blas_info:
libraries f77blas,cblas,atlas not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
/usr/lib/python3/dist-packages/numpy/distutils/system_info.py:1914: UserWarning:
Optimized (vendor) Blas libraries are not found.
Falls back to netlib Blas library which has worse performance.
A better performance should be easily gained by switching
Blas library.
if self._calc_info(blas):
blas_info:
C compiler: x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/build/nipy-0.4.3~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC
creating /tmp/tmp542z9vz0/tmp
creating /tmp/tmp542z9vz0/tmp/tmp542z9vz0
compile options: '-I/usr/local/include -I/usr/include -c'
x86_64-linux-gnu-gcc: /tmp/tmp542z9vz0/source.c
x86_64-linux-gnu-gcc -pthread /tmp/tmp542z9vz0/tmp/tmp542z9vz0/source.o -lblas -o /tmp/tmp542z9vz0/a.out
FOUND:
libraries = ['blas', 'blas']
library_dirs = ['/usr/lib/x86_64-linux-gnu']
include_dirs = ['/usr/local/include', '/usr/include']
language = c
define_macros = [('HAVE_CBLAS', None)]
FOUND:
define_macros = [('NO_ATLAS_INFO', 1), ('HAVE_CBLAS', None)]
libraries = ['blas', 'blas']
library_dirs = ['/usr/lib/x86_64-linux-gnu']
include_dirs = ['/usr/local/include', '/usr/include']
language = c
FOUND:
libraries = ['lapack', 'lapack', 'blas', 'blas']
library_dirs = ['/usr/lib/x86_64-linux-gnu']
language = c
define_macros = [('NO_ATLAS_INFO', 1), ('HAVE_CBLAS', None)]
include_dirs = ['/usr/local/include', '/usr/include']
Building with (slow) Lapack lite distribution: set NIPY_EXTERNAL_LAPACK environment variable or use setup.cfg to enable link to optimized BLAS / LAPACK
LAPACK build options:
library_dirs: []
libraries: []
lapack_info: {'libraries': ['lapack', 'lapack', 'blas', 'blas'], 'library_dirs': ['/usr/lib/x86_64-linux-gnu'], 'language': 'c', 'define_macros': [('NO_ATLAS_INFO', 1), ('HAVE_CBLAS', None)], 'include_dirs': ['/usr/local/include', '/usr/include']}
running build
running config_cc
unifing config_cc, config, build_clib, build_ext, build commands --compiler options
running config_fc
unifing config_fc, config, build_clib, build_ext, build commands --fcompiler options
running build_src
build_src
building py_modules sources
creating build/src.linux-x86_64-3.9
creating build/src.linux-x86_64-3.9/nipy
creating build/src.linux-x86_64-3.9/nipy/labs
building library "cstat" sources
building extension "nipy.algorithms.registration._registration" sources
cythonc:> build/src.linux-x86_64-3.9/nipy/algorithms/registration/_registration.c
creating build/src.linux-x86_64-3.9/nipy/algorithms
creating build/src.linux-x86_64-3.9/nipy/algorithms/registration
/usr/lib/python3/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /build/nipy-0.4.3~rc1/nipy/algorithms/registration/_registration.pyx
tree = Parsing.p_module(s, pxd, full_module_name)
building extension "nipy.algorithms.segmentation._segmentation" sources
cythonc:> build/src.linux-x86_64-3.9/nipy/algorithms/segmentation/_segmentation.c
creating build/src.linux-x86_64-3.9/nipy/algorithms/segmentation
/usr/lib/python3/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /build/nipy-0.4.3~rc1/nipy/algorithms/segmentation/_segmentation.pyx
tree = Parsing.p_module(s, pxd, full_module_name)
building extension "nipy.algorithms.statistics.intvol" sources
cythonc:> build/src.linux-x86_64-3.9/nipy/algorithms/statistics/intvol.c
creating build/src.linux-x86_64-3.9/nipy/algorithms/statistics
/usr/lib/python3/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /build/nipy-0.4.3~rc1/nipy/algorithms/statistics/intvol.pyx
tree = Parsing.p_module(s, pxd, full_module_name)
building extension "nipy.algorithms.statistics.histogram" sources
cythonc:> build/src.linux-x86_64-3.9/nipy/algorithms/statistics/histogram.c
/usr/lib/python3/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /build/nipy-0.4.3~rc1/nipy/algorithms/statistics/histogram.pyx
tree = Parsing.p_module(s, pxd, full_module_name)
building extension "nipy.algorithms.statistics._quantile" sources
cythonc:> build/src.linux-x86_64-3.9/nipy/algorithms/statistics/_quantile.c
/usr/lib/python3/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /build/nipy-0.4.3~rc1/nipy/algorithms/statistics/_quantile.pyx
tree = Parsing.p_module(s, pxd, full_module_name)
warning: nipy/algorithms/statistics/_quantile.pyx:51:16: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/algorithms/statistics/_quantile.pyx:51:20: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
building extension "nipy.algorithms.graph._graph" sources
building extension "nipy.labs.bindings.linalg" sources
cythonc:> build/src.linux-x86_64-3.9/nipy/labs/bindings/linalg.c
creating build/src.linux-x86_64-3.9/nipy/labs/bindings
/usr/lib/python3/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /build/nipy-0.4.3~rc1/nipy/labs/bindings/linalg.pyx
tree = Parsing.p_module(s, pxd, full_module_name)
warning: nipy/labs/bindings/linalg.pyx:108:20: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/linalg.pyx:108:24: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/linalg.pyx:122:20: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/linalg.pyx:122:24: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/linalg.pyx:136:20: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/linalg.pyx:136:24: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/linalg.pyx:150:20: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/linalg.pyx:150:24: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/linalg.pyx:164:20: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/linalg.pyx:164:24: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/linalg.pyx:164:28: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/linalg.pyx:180:20: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/linalg.pyx:180:24: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/linalg.pyx:180:28: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/linalg.pyx:196:20: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/linalg.pyx:196:24: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/linalg.pyx:196:28: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/linalg.pyx:212:20: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/linalg.pyx:212:24: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/linalg.pyx:212:28: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/linalg.pyx:303:20: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/linalg.pyx:303:24: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/linalg.pyx:315:20: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/linalg.pyx:315:24: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/linalg.pyx:315:28: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/linalg.pyx:371:20: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/linalg.pyx:371:24: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/linalg.pyx:377:20: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/linalg.pyx:377:24: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/linalg.pyx:377:28: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/linalg.pyx:387:20: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/linalg.pyx:387:24: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/linalg.pyx:406:20: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/linalg.pyx:406:24: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/linalg.pyx:406:28: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/linalg.pyx:406:32: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/linalg.pyx:431:20: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/linalg.pyx:431:24: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/linalg.pyx:431:28: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/linalg.pyx:431:32: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/linalg.pyx:458:20: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/linalg.pyx:458:24: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/linalg.pyx:458:28: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/linalg.pyx:485:20: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/linalg.pyx:485:24: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/linalg.pyx:485:28: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/linalg.pyx:510:20: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/linalg.pyx:510:24: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/linalg.pyx:510:28: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/linalg.pyx:532:20: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/linalg.pyx:532:24: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/linalg.pyx:532:28: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/linalg.pyx:532:32: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
building extension "nipy.labs.bindings.array" sources
cythonc:> build/src.linux-x86_64-3.9/nipy/labs/bindings/array.c
/usr/lib/python3/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /build/nipy-0.4.3~rc1/nipy/labs/bindings/array.pyx
tree = Parsing.p_module(s, pxd, full_module_name)
warning: nipy/labs/bindings/array.pyx:45:19: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/array.pyx:45:23: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/array.pyx:60:19: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/array.pyx:60:23: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/array.pyx:60:27: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/array.pyx:77:19: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/array.pyx:77:23: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/array.pyx:77:27: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/array.pyx:94:19: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/array.pyx:94:23: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/array.pyx:94:27: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/array.pyx:111:19: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/array.pyx:111:23: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/array.pyx:111:27: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
building extension "nipy.labs.bindings.wrapper" sources
cythonc:> build/src.linux-x86_64-3.9/nipy/labs/bindings/wrapper.c
/usr/lib/python3/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /build/nipy-0.4.3~rc1/nipy/labs/bindings/wrapper.pyx
tree = Parsing.p_module(s, pxd, full_module_name)
warning: nipy/labs/bindings/wrapper.pyx:65:20: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/wrapper.pyx:65:24: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/wrapper.pyx:108:20: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/wrapper.pyx:108:24: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/wrapper.pyx:120:19: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/wrapper.pyx:120:23: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/wrapper.pyx:132:20: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/wrapper.pyx:132:24: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/wrapper.pyx:132:28: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/wrapper.pyx:155:20: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/wrapper.pyx:155:24: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/wrapper.pyx:187:20: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/bindings/wrapper.pyx:187:24: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
building extension "nipy.labs.glm.kalman" sources
cythonc:> build/src.linux-x86_64-3.9/nipy/labs/glm/kalman.c
creating build/src.linux-x86_64-3.9/nipy/labs/glm
/usr/lib/python3/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /build/nipy-0.4.3~rc1/nipy/labs/glm/kalman.pyx
tree = Parsing.p_module(s, pxd, full_module_name)
warning: nipy/labs/glm/kalman.pyx:87:20: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/glm/kalman.pyx:87:24: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/glm/kalman.pyx:87:28: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/glm/kalman.pyx:164:20: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/glm/kalman.pyx:164:24: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/glm/kalman.pyx:164:28: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/glm/kalman.pyx:164:33: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/glm/kalman.pyx:164:38: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
building extension "nipy.labs.group.onesample" sources
cythonc:> build/src.linux-x86_64-3.9/nipy/labs/group/onesample.c
creating build/src.linux-x86_64-3.9/nipy/labs/group
/usr/lib/python3/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /build/nipy-0.4.3~rc1/nipy/labs/group/onesample.pyx
tree = Parsing.p_module(s, pxd, full_module_name)
warning: nipy/labs/group/onesample.pyx:96:18: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/group/onesample.pyx:96:22: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/group/onesample.pyx:96:26: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/group/onesample.pyx:96:35: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/group/onesample.pyx:165:18: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/group/onesample.pyx:165:22: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/group/onesample.pyx:165:26: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/group/onesample.pyx:165:30: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/group/onesample.pyx:165:39: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/group/onesample.pyx:236:18: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/group/onesample.pyx:236:22: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/group/onesample.pyx:236:26: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/group/onesample.pyx:236:30: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/group/onesample.pyx:280:18: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/group/onesample.pyx:280:22: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/group/onesample.pyx:280:26: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/group/onesample.pyx:280:31: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
building extension "nipy.labs.group.twosample" sources
cythonc:> build/src.linux-x86_64-3.9/nipy/labs/group/twosample.c
/usr/lib/python3/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /build/nipy-0.4.3~rc1/nipy/labs/group/twosample.pyx
tree = Parsing.p_module(s, pxd, full_module_name)
warning: nipy/labs/group/twosample.pyx:73:18: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/group/twosample.pyx:73:23: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/group/twosample.pyx:73:28: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/group/twosample.pyx:73:32: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/group/twosample.pyx:73:37: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/group/twosample.pyx:74:17: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/group/twosample.pyx:74:24: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/group/twosample.pyx:158:18: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/group/twosample.pyx:158:23: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/group/twosample.pyx:158:28: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/group/twosample.pyx:158:33: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/group/twosample.pyx:158:38: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/group/twosample.pyx:158:42: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/group/twosample.pyx:158:47: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/group/twosample.pyx:158:52: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/group/twosample.pyx:159:17: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/group/twosample.pyx:159:24: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
building extension "nipy.labs.group.glm_twolevel" sources
cythonc:> build/src.linux-x86_64-3.9/nipy/labs/group/glm_twolevel.c
/usr/lib/python3/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /build/nipy-0.4.3~rc1/nipy/labs/group/glm_twolevel.pyx
tree = Parsing.p_module(s, pxd, full_module_name)
warning: nipy/labs/group/glm_twolevel.pyx:64:20: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/group/glm_twolevel.pyx:64:24: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/group/glm_twolevel.pyx:64:29: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/group/glm_twolevel.pyx:64:33: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/group/glm_twolevel.pyx:65:20: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/group/glm_twolevel.pyx:65:24: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/group/glm_twolevel.pyx:134:20: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/group/glm_twolevel.pyx:134:24: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/group/glm_twolevel.pyx:134:29: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/group/glm_twolevel.pyx:134:33: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/group/glm_twolevel.pyx:134:38: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/group/glm_twolevel.pyx:134:43: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
building extension "nipy.labs.utils.routines" sources
cythonc:> build/src.linux-x86_64-3.9/nipy/labs/utils/routines.c
creating build/src.linux-x86_64-3.9/nipy/labs/utils
/usr/lib/python3/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /build/nipy-0.4.3~rc1/nipy/labs/utils/routines.pyx
tree = Parsing.p_module(s, pxd, full_module_name)
warning: nipy/labs/utils/routines.pyx:56:20: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/utils/routines.pyx:56:24: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/utils/routines.pyx:101:20: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/utils/routines.pyx:101:24: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/utils/routines.pyx:101:29: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/utils/routines.pyx:101:37: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/utils/routines.pyx:101:46: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/utils/routines.pyx:166:20: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/utils/routines.pyx:166:27: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/utils/routines.pyx:166:36: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/utils/routines.pyx:166:49: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/utils/routines.pyx:166:53: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/utils/routines.pyx:169:20: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/utils/routines.pyx:169:26: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/utils/routines.pyx:169:30: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/utils/routines.pyx:238:19: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/utils/routines.pyx:238:23: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/utils/routines.pyx:258:19: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
warning: nipy/labs/utils/routines.pyx:258:23: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line.
building data_files sources
build_src: building npy-pkg config files
running build_py
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy
copying nipy/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy
copying nipy/setup.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy
copying nipy/info.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy
copying nipy/pkg_info.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy
copying build/src.linux-x86_64-3.9/nipy/__config__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms
copying nipy/algorithms/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms
copying nipy/algorithms/optimize.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms
copying nipy/algorithms/setup.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms
copying nipy/algorithms/resample.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms
copying nipy/algorithms/kernel_smooth.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms
copying nipy/algorithms/fwhm.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms
copying nipy/algorithms/interpolation.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/tests
copying nipy/algorithms/tests/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/tests
copying nipy/algorithms/tests/test_resample.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/tests
copying nipy/algorithms/tests/test_kernel_smooth.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/tests
copying nipy/algorithms/tests/test_interpolator.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/tests
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/registration
copying nipy/algorithms/registration/polyaffine.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/registration
copying nipy/algorithms/registration/similarity_measures.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/registration
copying nipy/algorithms/registration/transform.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/registration
copying nipy/algorithms/registration/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/registration
copying nipy/algorithms/registration/type_check.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/registration
copying nipy/algorithms/registration/setup.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/registration
copying nipy/algorithms/registration/chain_transform.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/registration
copying nipy/algorithms/registration/resample.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/registration
copying nipy/algorithms/registration/optimizer.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/registration
copying nipy/algorithms/registration/histogram_registration.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/registration
copying nipy/algorithms/registration/groupwise_registration.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/registration
copying nipy/algorithms/registration/affine.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/registration
copying nipy/algorithms/registration/scripting.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/registration
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/registration/tests
copying nipy/algorithms/registration/tests/test_scripting.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/registration/tests
copying nipy/algorithms/registration/tests/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/registration/tests
copying nipy/algorithms/registration/tests/test_cubic_spline.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/registration/tests
copying nipy/algorithms/registration/tests/test_affine.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/registration/tests
copying nipy/algorithms/registration/tests/test_resample.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/registration/tests
copying nipy/algorithms/registration/tests/test_histogram_registration.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/registration/tests
copying nipy/algorithms/registration/tests/test_register.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/registration/tests
copying nipy/algorithms/registration/tests/test_fmri_realign4d.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/registration/tests
copying nipy/algorithms/registration/tests/test_transform.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/registration/tests
copying nipy/algorithms/registration/tests/test_chain_transforms.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/registration/tests
copying nipy/algorithms/registration/tests/test_slice_timing.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/registration/tests
copying nipy/algorithms/registration/tests/test_polyaffine.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/registration/tests
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/slicetiming
copying nipy/algorithms/slicetiming/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/slicetiming
copying nipy/algorithms/slicetiming/setup.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/slicetiming
copying nipy/algorithms/slicetiming/timefuncs.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/slicetiming
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/slicetiming/tests
copying nipy/algorithms/slicetiming/tests/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/slicetiming/tests
copying nipy/algorithms/slicetiming/tests/test_timefuncs.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/slicetiming/tests
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/segmentation
copying nipy/algorithms/segmentation/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/segmentation
copying nipy/algorithms/segmentation/brain_segmentation.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/segmentation
copying nipy/algorithms/segmentation/setup.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/segmentation
copying nipy/algorithms/segmentation/segmentation.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/segmentation
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/segmentation/tests
copying nipy/algorithms/segmentation/tests/test_segmentation.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/segmentation/tests
copying nipy/algorithms/segmentation/tests/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/segmentation/tests
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/statistics
copying nipy/algorithms/statistics/bayesian_mixed_effects.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/statistics
copying nipy/algorithms/statistics/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/statistics
copying nipy/algorithms/statistics/setup.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/statistics
copying nipy/algorithms/statistics/empirical_pvalue.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/statistics
copying nipy/algorithms/statistics/utils.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/statistics
copying nipy/algorithms/statistics/onesample.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/statistics
copying nipy/algorithms/statistics/api.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/statistics
copying nipy/algorithms/statistics/rft.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/statistics
copying nipy/algorithms/statistics/mixed_effects_stat.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/statistics
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/statistics/models
copying nipy/algorithms/statistics/models/setupscons.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/statistics/models
copying nipy/algorithms/statistics/models/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/statistics/models
copying nipy/algorithms/statistics/models/nlsmodel.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/statistics/models
copying nipy/algorithms/statistics/models/setup.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/statistics/models
copying nipy/algorithms/statistics/models/info.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/statistics/models
copying nipy/algorithms/statistics/models/utils.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/statistics/models
copying nipy/algorithms/statistics/models/model.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/statistics/models
copying nipy/algorithms/statistics/models/regression.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/statistics/models
copying nipy/algorithms/statistics/models/glm.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/statistics/models
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/statistics/models/family
copying nipy/algorithms/statistics/models/family/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/statistics/models/family
copying nipy/algorithms/statistics/models/family/varfuncs.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/statistics/models/family
copying nipy/algorithms/statistics/models/family/links.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/statistics/models/family
copying nipy/algorithms/statistics/models/family/family.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/statistics/models/family
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/statistics/models/tests
copying nipy/algorithms/statistics/models/tests/test_anova.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/statistics/models/tests
copying nipy/algorithms/statistics/models/tests/test_glm.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/statistics/models/tests
copying nipy/algorithms/statistics/models/tests/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/statistics/models/tests
copying nipy/algorithms/statistics/models/tests/test_regression.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/statistics/models/tests
copying nipy/algorithms/statistics/models/tests/test_ar.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/statistics/models/tests
copying nipy/algorithms/statistics/models/tests/test_model.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/statistics/models/tests
copying nipy/algorithms/statistics/models/tests/exampledata.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/statistics/models/tests
copying nipy/algorithms/statistics/models/tests/test_olsR.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/statistics/models/tests
copying nipy/algorithms/statistics/models/tests/test_estimable.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/statistics/models/tests
copying nipy/algorithms/statistics/models/tests/test_utils.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/statistics/models/tests
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/statistics/formula
copying nipy/algorithms/statistics/formula/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/statistics/formula
copying nipy/algorithms/statistics/formula/setup.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/statistics/formula
copying nipy/algorithms/statistics/formula/formulae.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/statistics/formula
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/statistics/formula/tests
copying nipy/algorithms/statistics/formula/tests/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/statistics/formula/tests
copying nipy/algorithms/statistics/formula/tests/test_formula.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/statistics/formula/tests
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/statistics/bench
copying nipy/algorithms/statistics/bench/bench_intvol.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/statistics/bench
copying nipy/algorithms/statistics/bench/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/statistics/bench
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/statistics/tests
copying nipy/algorithms/statistics/tests/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/statistics/tests
copying nipy/algorithms/statistics/tests/test_mixed_effects.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/statistics/tests
copying nipy/algorithms/statistics/tests/test_rft.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/statistics/tests
copying nipy/algorithms/statistics/tests/test_intrinsic_volumes.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/statistics/tests
copying nipy/algorithms/statistics/tests/test_onesample.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/statistics/tests
copying nipy/algorithms/statistics/tests/test_quantile.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/statistics/tests
copying nipy/algorithms/statistics/tests/test_empirical_pvalue.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/statistics/tests
copying nipy/algorithms/statistics/tests/test_utils.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/statistics/tests
copying nipy/algorithms/statistics/tests/test_histogram.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/statistics/tests
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/diagnostics
copying nipy/algorithms/diagnostics/tsdiffplot.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/diagnostics
copying nipy/algorithms/diagnostics/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/diagnostics
copying nipy/algorithms/diagnostics/commands.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/diagnostics
copying nipy/algorithms/diagnostics/timediff.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/diagnostics
copying nipy/algorithms/diagnostics/setup.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/diagnostics
copying nipy/algorithms/diagnostics/screens.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/diagnostics
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/diagnostics/tests
copying nipy/algorithms/diagnostics/tests/test_time_difference.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/diagnostics/tests
copying nipy/algorithms/diagnostics/tests/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/diagnostics/tests
copying nipy/algorithms/diagnostics/tests/test_screen.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/diagnostics/tests
copying nipy/algorithms/diagnostics/tests/test_commands.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/diagnostics/tests
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/clustering
copying nipy/algorithms/clustering/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/clustering
copying nipy/algorithms/clustering/bgmm.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/clustering
copying nipy/algorithms/clustering/gmm.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/clustering
copying nipy/algorithms/clustering/von_mises_fisher_mixture.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/clustering
copying nipy/algorithms/clustering/setup.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/clustering
copying nipy/algorithms/clustering/ggmixture.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/clustering
copying nipy/algorithms/clustering/hierarchical_clustering.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/clustering
copying nipy/algorithms/clustering/utils.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/clustering
copying nipy/algorithms/clustering/imm.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/clustering
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/clustering/tests
copying nipy/algorithms/clustering/tests/test_vmm.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/clustering/tests
copying nipy/algorithms/clustering/tests/test_ggm.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/clustering/tests
copying nipy/algorithms/clustering/tests/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/clustering/tests
copying nipy/algorithms/clustering/tests/test_gmm.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/clustering/tests
copying nipy/algorithms/clustering/tests/test_bgmm.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/clustering/tests
copying nipy/algorithms/clustering/tests/test_imm.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/clustering/tests
copying nipy/algorithms/clustering/tests/test_hierarchical_clustering.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/clustering/tests
copying nipy/algorithms/clustering/tests/test_clustering.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/clustering/tests
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/utils
copying nipy/algorithms/utils/pca.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/utils
copying nipy/algorithms/utils/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/utils
copying nipy/algorithms/utils/setup.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/utils
copying nipy/algorithms/utils/fast_distance.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/utils
copying nipy/algorithms/utils/matrices.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/utils
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/utils/tests
copying nipy/algorithms/utils/tests/test_pca_image.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/utils/tests
copying nipy/algorithms/utils/tests/test_matrices.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/utils/tests
copying nipy/algorithms/utils/tests/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/utils/tests
copying nipy/algorithms/utils/tests/test_fast_distance.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/utils/tests
copying nipy/algorithms/utils/tests/test_pca.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/utils/tests
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/graph
copying nipy/algorithms/graph/field.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/graph
copying nipy/algorithms/graph/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/graph
copying nipy/algorithms/graph/setup.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/graph
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copying nipy/algorithms/graph/forest.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/graph
copying nipy/algorithms/graph/graph.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/graph
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/graph/tests
copying nipy/algorithms/graph/tests/test_field.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/graph/tests
copying nipy/algorithms/graph/tests/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/graph/tests
copying nipy/algorithms/graph/tests/test_forest.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/graph/tests
copying nipy/algorithms/graph/tests/test_graph.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/graph/tests
copying nipy/algorithms/graph/tests/test_bipartite_graph.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/graph/tests
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/group
copying nipy/algorithms/group/parcel_analysis.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/group
copying nipy/algorithms/group/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/group
copying nipy/algorithms/group/setup.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/group
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/group/tests
copying nipy/algorithms/group/tests/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/group/tests
copying nipy/algorithms/group/tests/test_parcel_analysis.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/group/tests
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/interfaces
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copying nipy/interfaces/setup.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/interfaces
copying nipy/interfaces/spm.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/interfaces
copying nipy/interfaces/matlab.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/interfaces
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/interfaces/tests
copying nipy/interfaces/tests/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/interfaces/tests
copying nipy/interfaces/tests/test_mlabtemp.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/interfaces/tests
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/core
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copying nipy/core/setup.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/core
copying nipy/core/api.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/core
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/core/image
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copying nipy/core/image/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/core/image
copying nipy/core/image/roi.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/core/image
copying nipy/core/image/image_spaces.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/core/image
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copying nipy/core/image/image_list.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/core/image
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/core/image/tests
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copying nipy/core/image/tests/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/core/image/tests
copying nipy/core/image/tests/test_image.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/core/image/tests
copying nipy/core/image/tests/test_rollimg.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/core/image/tests
copying nipy/core/image/tests/test_image_spaces.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/core/image/tests
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/core/utils
copying nipy/core/utils/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/core/utils
copying nipy/core/utils/setup.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/core/utils
copying nipy/core/utils/generators.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/core/utils
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/core/utils/tests
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copying nipy/core/utils/tests/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/core/utils/tests
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/core/reference
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copying nipy/core/reference/spaces.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/core/reference
copying nipy/core/reference/coordinate_map.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/core/reference
copying nipy/core/reference/slices.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/core/reference
copying nipy/core/reference/array_coords.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/core/reference
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copying nipy/core/reference/tests/matrix_groups.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/core/reference/tests
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copying nipy/core/reference/tests/test_spaces.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/core/reference/tests
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copying nipy/core/reference/tests/test_array_coords.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/core/reference/tests
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/fixes
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creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/fixes/numpy
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creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/fixes/numpy/testing
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copying nipy/fixes/numpy/testing/nosetester.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/fixes/numpy/testing
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copying nipy/fixes/nibabel/orientations.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/fixes/nibabel
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/fixes/scipy
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creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/fixes/scipy/ndimage
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copying nipy/io/nifti_ref.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/io
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creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/modalities
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creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/modalities/fmri
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copying nipy/modalities/fmri/hemodynamic_models.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/modalities/fmri
copying nipy/modalities/fmri/hrf.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/modalities/fmri
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copying nipy/modalities/fmri/tests/test_aliases.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/modalities/fmri/tests
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copying nipy/modalities/fmri/tests/test_iterators.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/modalities/fmri/tests
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creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/modalities/fmri/fmristat
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copying nipy/modalities/fmri/fmristat/hrf.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/modalities/fmri/fmristat
copying nipy/modalities/fmri/fmristat/setup.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/modalities/fmri/fmristat
copying nipy/modalities/fmri/fmristat/outputters.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/modalities/fmri/fmristat
copying nipy/modalities/fmri/fmristat/model.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/modalities/fmri/fmristat
copying nipy/modalities/fmri/fmristat/api.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/modalities/fmri/fmristat
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/modalities/fmri/fmristat/tests
copying nipy/modalities/fmri/fmristat/tests/test_iterables.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/modalities/fmri/fmristat/tests
copying nipy/modalities/fmri/fmristat/tests/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/modalities/fmri/fmristat/tests
copying nipy/modalities/fmri/fmristat/tests/test_outputters.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/modalities/fmri/fmristat/tests
copying nipy/modalities/fmri/fmristat/tests/test_FIAC.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/modalities/fmri/fmristat/tests
copying nipy/modalities/fmri/fmristat/tests/test_model.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/modalities/fmri/fmristat/tests
copying nipy/modalities/fmri/fmristat/tests/test_hrf.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/modalities/fmri/fmristat/tests
copying nipy/modalities/fmri/fmristat/tests/FIACdesigns.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/modalities/fmri/fmristat/tests
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/modalities/fmri/spm
copying nipy/modalities/fmri/spm/reml.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/modalities/fmri/spm
copying nipy/modalities/fmri/spm/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/modalities/fmri/spm
copying nipy/modalities/fmri/spm/correlation.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/modalities/fmri/spm
copying nipy/modalities/fmri/spm/model.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/modalities/fmri/spm
copying nipy/modalities/fmri/spm/trace.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/modalities/fmri/spm
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/utils
copying nipy/utils/perlpie.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/utils
copying nipy/utils/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/utils
copying nipy/utils/skip_test.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/utils
copying nipy/utils/setup.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/utils
copying nipy/utils/compat3.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/utils
copying nipy/utils/arrays.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/utils
copying nipy/utils/utilities.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/utils
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/utils/tests
copying nipy/utils/tests/test_arrays.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/utils/tests
copying nipy/utils/tests/test_compat3.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/utils/tests
copying nipy/utils/tests/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/utils/tests
copying nipy/utils/tests/test_skip_test.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/utils/tests
copying nipy/utils/tests/test_utilities.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/utils/tests
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/tests
copying nipy/tests/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/tests
copying nipy/tests/scriptrunner.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/tests
copying nipy/tests/test_scripts.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/tests
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/externals
copying nipy/externals/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/externals
copying nipy/externals/validate.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/externals
copying nipy/externals/six.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/externals
copying nipy/externals/setup.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/externals
copying nipy/externals/configobj.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/externals
copying nipy/externals/argparse.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/externals
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/externals/transforms3d
copying nipy/externals/transforms3d/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/externals/transforms3d
copying nipy/externals/transforms3d/setup.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/externals/transforms3d
copying nipy/externals/transforms3d/taitbryan.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/externals/transforms3d
copying nipy/externals/transforms3d/quaternions.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/externals/transforms3d
copying nipy/externals/transforms3d/utils.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/externals/transforms3d
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/externals/transforms3d/tests
copying nipy/externals/transforms3d/tests/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/externals/transforms3d/tests
copying nipy/externals/transforms3d/tests/test_taitbryan.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/externals/transforms3d/tests
copying nipy/externals/transforms3d/tests/samples.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/externals/transforms3d/tests
copying nipy/externals/transforms3d/tests/test_quaternions.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/externals/transforms3d/tests
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/testing
copying nipy/testing/doctester.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/testing
copying nipy/testing/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/testing
copying nipy/testing/nosetester.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/testing
copying nipy/testing/setup.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/testing
copying nipy/testing/decorators.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/testing
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/testing/tests
copying nipy/testing/tests/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/testing/tests
copying nipy/testing/tests/test_doctester.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/testing/tests
copying nipy/testing/tests/test_images.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/testing/tests
copying nipy/testing/tests/test_doctesting.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/testing/tests
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs
copying nipy/labs/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs
copying nipy/labs/mask.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs
copying nipy/labs/setup.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs
copying nipy/labs/viz3d.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs
copying nipy/labs/statistical_mapping.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs
copying nipy/labs/viz.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs
copying build/src.linux-x86_64-3.9/nipy/labs/__config__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/bindings
copying nipy/labs/bindings/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/bindings
copying nipy/labs/bindings/setup.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/bindings
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/bindings/tests
copying nipy/labs/bindings/tests/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/bindings/tests
copying nipy/labs/bindings/tests/test_array.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/bindings/tests
copying nipy/labs/bindings/tests/test_blas1.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/bindings/tests
copying nipy/labs/bindings/tests/test_linalg.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/bindings/tests
copying nipy/labs/bindings/tests/test_blas3.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/bindings/tests
copying nipy/labs/bindings/tests/test_numpy.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/bindings/tests
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/bindings/benchmarks
copying nipy/labs/bindings/benchmarks/bench_numpy.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/bindings/benchmarks
copying nipy/labs/bindings/benchmarks/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/bindings/benchmarks
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/glm
copying nipy/labs/glm/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/glm
copying nipy/labs/glm/setup.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/glm
copying nipy/labs/glm/glm.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/glm
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/glm/tests
copying nipy/labs/glm/tests/test_glm.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/glm/tests
copying nipy/labs/glm/tests/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/glm/tests
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/glm/benchmarks
copying nipy/labs/glm/benchmarks/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/glm/benchmarks
copying nipy/labs/glm/benchmarks/bench_glm.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/glm/benchmarks
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/group
copying nipy/labs/group/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/group
copying nipy/labs/group/permutation_test.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/group
copying nipy/labs/group/setup.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/group
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/group/tests
copying nipy/labs/group/tests/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/group/tests
copying nipy/labs/group/tests/test_permutation_test.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/group/tests
copying nipy/labs/group/tests/test_onesample_stat.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/group/tests
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/spatial_models
copying nipy/labs/spatial_models/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/spatial_models
copying nipy/labs/spatial_models/parcellation.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/spatial_models
copying nipy/labs/spatial_models/mroi.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/spatial_models
copying nipy/labs/spatial_models/discrete_domain.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/spatial_models
copying nipy/labs/spatial_models/hierarchical_parcellation.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/spatial_models
copying nipy/labs/spatial_models/setup.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/spatial_models
copying nipy/labs/spatial_models/structural_bfls.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/spatial_models
copying nipy/labs/spatial_models/hroi.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/spatial_models
copying nipy/labs/spatial_models/bayesian_structural_analysis.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/spatial_models
copying nipy/labs/spatial_models/parcel_io.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/spatial_models
copying nipy/labs/spatial_models/bsa_io.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/spatial_models
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/spatial_models/tests
copying nipy/labs/spatial_models/tests/test_parcel.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/spatial_models/tests
copying nipy/labs/spatial_models/tests/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/spatial_models/tests
copying nipy/labs/spatial_models/tests/test_hroi.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/spatial_models/tests
copying nipy/labs/spatial_models/tests/test_mroi.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/spatial_models/tests
copying nipy/labs/spatial_models/tests/test_bsa_io.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/spatial_models/tests
copying nipy/labs/spatial_models/tests/test_discrete_domain.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/spatial_models/tests
copying nipy/labs/spatial_models/tests/test_parcel_io.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/spatial_models/tests
copying nipy/labs/spatial_models/tests/test_bsa.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/spatial_models/tests
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/utils
copying nipy/labs/utils/reproducibility_measures.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/utils
copying nipy/labs/utils/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/utils
copying nipy/labs/utils/mask.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/utils
copying nipy/labs/utils/setup.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/utils
copying nipy/labs/utils/simul_multisubject_fmri_dataset.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/utils
copying nipy/labs/utils/zscore.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/utils
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/utils/tests
copying nipy/labs/utils/tests/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/utils/tests
copying nipy/labs/utils/tests/test_repro.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/utils/tests
copying nipy/labs/utils/tests/test_misc.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/utils/tests
copying nipy/labs/utils/tests/test_simul_multisubject_fmri_dataset.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/utils/tests
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/viz_tools
copying nipy/labs/viz_tools/cm.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/viz_tools
copying nipy/labs/viz_tools/slicers.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/viz_tools
copying nipy/labs/viz_tools/activation_maps.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/viz_tools
copying nipy/labs/viz_tools/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/viz_tools
copying nipy/labs/viz_tools/setup.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/viz_tools
copying nipy/labs/viz_tools/maps_3d.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/viz_tools
copying nipy/labs/viz_tools/coord_tools.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/viz_tools
copying nipy/labs/viz_tools/edge_detect.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/viz_tools
copying nipy/labs/viz_tools/anat_cache.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/viz_tools
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/viz_tools/test
copying nipy/labs/viz_tools/test/test_edge_detect.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/viz_tools/test
copying nipy/labs/viz_tools/test/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/viz_tools/test
copying nipy/labs/viz_tools/test/test_cm.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/viz_tools/test
copying nipy/labs/viz_tools/test/test_activation_maps.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/viz_tools/test
copying nipy/labs/viz_tools/test/test_slicers.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/viz_tools/test
copying nipy/labs/viz_tools/test/test_coord_tools.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/viz_tools/test
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/datasets
copying nipy/labs/datasets/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/datasets
copying nipy/labs/datasets/setup.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/datasets
copying nipy/labs/datasets/converters.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/datasets
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/datasets/volumes
copying nipy/labs/datasets/volumes/volume_data.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/datasets/volumes
copying nipy/labs/datasets/volumes/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/datasets/volumes
copying nipy/labs/datasets/volumes/volume_field.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/datasets/volumes
copying nipy/labs/datasets/volumes/volume_img.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/datasets/volumes
copying nipy/labs/datasets/volumes/setup.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/datasets/volumes
copying nipy/labs/datasets/volumes/volume_grid.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/datasets/volumes
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/datasets/volumes/tests
copying nipy/labs/datasets/volumes/tests/test_volume_data.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/datasets/volumes/tests
copying nipy/labs/datasets/volumes/tests/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/datasets/volumes/tests
copying nipy/labs/datasets/volumes/tests/test_volume_grid.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/datasets/volumes/tests
copying nipy/labs/datasets/volumes/tests/test_volume_field.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/datasets/volumes/tests
copying nipy/labs/datasets/volumes/tests/test_volume_img.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/datasets/volumes/tests
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/datasets/transforms
copying nipy/labs/datasets/transforms/transform.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/datasets/transforms
copying nipy/labs/datasets/transforms/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/datasets/transforms
copying nipy/labs/datasets/transforms/affine_utils.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/datasets/transforms
copying nipy/labs/datasets/transforms/setup.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/datasets/transforms
copying nipy/labs/datasets/transforms/affine_transform.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/datasets/transforms
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/datasets/transforms/tests
copying nipy/labs/datasets/transforms/tests/test_affine_transform.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/datasets/transforms/tests
copying nipy/labs/datasets/transforms/tests/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/datasets/transforms/tests
copying nipy/labs/datasets/transforms/tests/test_transform.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/datasets/transforms/tests
copying nipy/labs/datasets/transforms/tests/test_affine_utils.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/datasets/transforms/tests
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/datasets/tests
copying nipy/labs/datasets/tests/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/datasets/tests
copying nipy/labs/datasets/tests/test_converters.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/datasets/tests
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/tests
copying nipy/labs/tests/test_mask.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/tests
copying nipy/labs/tests/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/tests
copying nipy/labs/tests/test_statistical_mapping.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/tests
running build_clib
customize UnixCCompiler
customize UnixCCompiler using build_clib
building 'cstat' library
compiling C sources
C compiler: x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/build/nipy-0.4.3~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC
creating build/temp.linux-x86_64-3.9
creating build/temp.linux-x86_64-3.9/build
creating build/temp.linux-x86_64-3.9/build/nipy-0.4.3~rc1
creating build/temp.linux-x86_64-3.9/build/nipy-0.4.3~rc1/lib
creating build/temp.linux-x86_64-3.9/build/nipy-0.4.3~rc1/lib/fff
creating build/temp.linux-x86_64-3.9/build/nipy-0.4.3~rc1/lib/fff_python_wrapper
creating build/temp.linux-x86_64-3.9/build/nipy-0.4.3~rc1/lib/lapack_lite
compile options: '-I/usr/lib/python3/dist-packages/numpy/core/include -Inipy/algorithms/registration -Inipy/algorithms/slicetiming -Inipy/algorithms/segmentation -Inipy/algorithms/statistics -I/build/nipy-0.4.3~rc1/lib/fff -I/build/nipy-0.4.3~rc1/lib/fff_python_wrapper -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.9 -c'
x86_64-linux-gnu-gcc: /build/nipy-0.4.3~rc1/lib/fff/fff_array.c
x86_64-linux-gnu-gcc: /build/nipy-0.4.3~rc1/lib/fff/fff_base.c
x86_64-linux-gnu-gcc: /build/nipy-0.4.3~rc1/lib/fff/fff_gen_stats.c
x86_64-linux-gnu-gcc: /build/nipy-0.4.3~rc1/lib/fff/fff_glm_kalman.c
x86_64-linux-gnu-gcc: /build/nipy-0.4.3~rc1/lib/fff/fff_blas.c
x86_64-linux-gnu-gcc: /build/nipy-0.4.3~rc1/lib/fff/fff_lapack.c
x86_64-linux-gnu-gcc: /build/nipy-0.4.3~rc1/lib/fff/fff_glm_twolevel.c
x86_64-linux-gnu-gcc: /build/nipy-0.4.3~rc1/lib/fff/fff_matrix.c
x86_64-linux-gnu-gcc: /build/nipy-0.4.3~rc1/lib/fff/fff_onesample_stat.c
x86_64-linux-gnu-gcc: /build/nipy-0.4.3~rc1/lib/fff/fff_routines.c
/build/nipy-0.4.3~rc1/lib/fff/fff_matrix.c: In function 'fff_matrix_transpose':
/build/nipy-0.4.3~rc1/lib/fff/fff_matrix.c:264:20: warning: variable 'rB' set but not used [-Wunused-but-set-variable]
264 | size_t i, j, rA, rB;
| ^~
/build/nipy-0.4.3~rc1/lib/fff/fff_blas.c: In function 'fff_blas_ddot':
/build/nipy-0.4.3~rc1/lib/fff/fff_blas.c:97:10: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'const long unsigned int'} [-Wsign-compare]
97 | if ( n != y->size )
| ^~
/build/nipy-0.4.3~rc1/lib/fff/fff_blas.c: In function 'fff_blas_dswap':
/build/nipy-0.4.3~rc1/lib/fff/fff_blas.c:142:10: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
142 | if ( n != y->size )
| ^~
/build/nipy-0.4.3~rc1/lib/fff/fff_blas.c: In function 'fff_blas_dcopy':
/build/nipy-0.4.3~rc1/lib/fff/fff_blas.c:155:10: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
155 | if ( n != y->size )
| ^~
/build/nipy-0.4.3~rc1/lib/fff/fff_blas.c: In function 'fff_blas_daxpy':
/build/nipy-0.4.3~rc1/lib/fff/fff_blas.c:168:10: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
168 | if ( n != y->size )
| ^~
/build/nipy-0.4.3~rc1/lib/fff/fff_blas.c: In function 'fff_blas_drot':
/build/nipy-0.4.3~rc1/lib/fff/fff_blas.c:202:10: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
202 | if ( n != y->size )
| ^~
/build/nipy-0.4.3~rc1/lib/fff/fff_blas.c: In function 'fff_blas_drotm':
/build/nipy-0.4.3~rc1/lib/fff/fff_blas.c:224:10: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
224 | if ( n != y->size )
| ^~
x86_64-linux-gnu-gcc: /build/nipy-0.4.3~rc1/lib/fff/fff_specfun.c
/build/nipy-0.4.3~rc1/lib/fff/fff_lapack.c: In function 'fff_lapack_dgetrf':
/build/nipy-0.4.3~rc1/lib/fff/fff_lapack.c:59:20: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
59 | (ipiv->dimX != FFF_MIN(m,n)) ||
| ^~
/build/nipy-0.4.3~rc1/lib/fff/fff_lapack.c: In function 'fff_lapack_dgeqrf':
/build/nipy-0.4.3~rc1/lib/fff/fff_lapack.c:82:19: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
82 | if ( (tau->size != FFF_MIN(m,n)) ||
| ^~
/build/nipy-0.4.3~rc1/lib/fff/fff_lapack.c: In function 'fff_lapack_dgesdd':
/build/nipy-0.4.3~rc1/lib/fff/fff_lapack.c:136:17: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
136 | if ( U->size1 != m)
| ^~
/build/nipy-0.4.3~rc1/lib/fff/fff_lapack.c:138:18: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
138 | if ( Vt->size1 != n)
| ^~
/build/nipy-0.4.3~rc1/lib/fff/fff_lapack.c:140:19: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
140 | if ( Aux->size1 != dmax)
| ^~
/build/nipy-0.4.3~rc1/lib/fff/fff_lapack.c:142:17: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
142 | if ( (s->size != dmin) ||
| ^~
/build/nipy-0.4.3~rc1/lib/fff/fff_lapack.c:147:21: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
147 | (iwork->dimX != 8*dmin) ||
| ^~
x86_64-linux-gnu-gcc: /build/nipy-0.4.3~rc1/lib/fff/fff_twosample_stat.c
x86_64-linux-gnu-gcc: /build/nipy-0.4.3~rc1/lib/fff/fff_vector.c
x86_64-linux-gnu-gcc: /build/nipy-0.4.3~rc1/lib/fff_python_wrapper/fffpy.c
x86_64-linux-gnu-gcc: /build/nipy-0.4.3~rc1/lib/lapack_lite/blas_lite.c
x86_64-linux-gnu-gcc: /build/nipy-0.4.3~rc1/lib/lapack_lite/dlamch.c
x86_64-linux-gnu-gcc: /build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c
x86_64-linux-gnu-gcc: /build/nipy-0.4.3~rc1/lib/lapack_lite/f2c_lite.c
/build/nipy-0.4.3~rc1/lib/lapack_lite/blas_lite.c: In function 'dgemm_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/blas_lite.c:607:57: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
607 | if (*m == 0 || *n == 0 || (*alpha == 0. || *k == 0) && *beta == 1.) {
| ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/blas_lite.c:419:31: warning: variable 'ncola' set but not used [-Wunused-but-set-variable]
419 | static integer i__, j, l, ncola;
| ^~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/blas_lite.c: In function 'dgemv_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/blas_lite.c:909:44: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
909 | if (*m == 0 || *n == 0 || *alpha == 0. && *beta == 1.) {
| ~~~~~~~~~~~~~^~~~~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/blas_lite.c: In function 'drotmg_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/blas_lite.c:1655:18: warning: variable 'igo_fmt' set but not used [-Wunused-but-set-variable]
1655 | static char *igo_fmt;
| ^~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/blas_lite.c: In function 'dsymm_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/blas_lite.c:2266:44: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
2266 | if (*m == 0 || *n == 0 || *alpha == 0. && *beta == 1.) {
| ~~~~~~~~~~~~~^~~~~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/blas_lite.c: In function 'dsymv_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/blas_lite.c:2548:33: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
2548 | if (*n == 0 || *alpha == 0. && *beta == 1.) {
| ~~~~~~~~~~~~~^~~~~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/blas_lite.c: In function 'dsyr2k_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/blas_lite.c:3363:46: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
3363 | if (*n == 0 || (*alpha == 0. || *k == 0) && *beta == 1.) {
| ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/blas_lite.c: In function 'dsyrk_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/blas_lite.c:3719:46: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
3719 | if (*n == 0 || (*alpha == 0. || *k == 0) && *beta == 1.) {
| ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/blas_lite.c: In function 'lsame_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/blas_lite.c:5588:18: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
5588 | if (inta >= 129 && inta <= 137 || inta >= 145 && inta <= 153 || inta
| ~~~~~~~~~~~~^~~~~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/blas_lite.c:5589:10: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
5588 | if (inta >= 129 && inta <= 137 || inta >= 145 && inta <= 153 || inta
| ~~~~
5589 | >= 162 && inta <= 169) {
| ~~~~~~~^~~~~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/blas_lite.c:5592:18: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
5592 | if (intb >= 129 && intb <= 137 || intb >= 145 && intb <= 153 || intb
| ~~~~~~~~~~~~^~~~~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/blas_lite.c:5593:10: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
5592 | if (intb >= 129 && intb <= 137 || intb >= 145 && intb <= 153 || intb
| ~~~~
5593 | >= 162 && intb <= 169) {
| ~~~~~~~^~~~~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlamch.c: In function 'dlamc4_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlamch.c:720:13: warning: variable 'i__1' set but not used [-Wunused-but-set-variable]
720 | integer i__1;
| ^~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlamch.c: In function 'dlamc5_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlamch.c:834:13: warning: variable 'i__1' set but not used [-Wunused-but-set-variable]
834 | integer i__1;
| ^~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c: In function 'dbdsdc_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:274:40: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
274 | } else if (*ldu < 1 || icompq == 2 && *ldu < *n) {
| ~~~~~~~~~~~~^~~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:276:41: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
276 | } else if (*ldvt < 1 || icompq == 2 && *ldvt < *n) {
| ~~~~~~~~~~~~^~~~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c: In function 'dbdsqr_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:768:27: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
768 | } else if (*ncvt == 0 && *ldvt < 1 || *ncvt > 0 && *ldvt < max(1,*n)) {
| ~~~~~~~~~~~^~~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:772:26: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
772 | } else if (*ncc == 0 && *ldc < 1 || *ncc > 0 && *ldc < max(1,*n)) {
| ~~~~~~~~~~^~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:1031:22: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
1031 | d__1)) || tol < 0. && (d__3 = e[m - 1], abs(d__3)) <= thresh)
| ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:1067:17: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
1067 | ) || tol < 0. && (d__3 = e[ll], abs(d__3)) <= thresh) {
| ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c: In function 'dgeev_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:2840:36: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
2840 | } else if (*ldvl < 1 || wantvl && *ldvl < *n) {
| ~~~~~~~^~~~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:2842:36: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
2842 | } else if (*ldvr < 1 || wantvr && *ldvr < *n) {
| ~~~~~~~^~~~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c: In function 'dgesdd_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:5337:35: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
5337 | } else if (*ldu < 1 || wntqas && *ldu < *m || wntqo && *m < *n && *ldu < *
| ~~~~~~~^~~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:5337:68: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
5337 | } else if (*ldu < 1 || wntqas && *ldu < *m || wntqo && *m < *n && *ldu < *
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~
5338 | m) {
| ~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:5340:35: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
5340 | } else if (*ldvt < 1 || wntqa && *ldvt < *n || wntqs && *ldvt < minmn ||
| ~~~~~~^~~~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:5340:58: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
5340 | } else if (*ldvt < 1 || wntqa && *ldvt < *n || wntqs && *ldvt < minmn ||
| ~~~~~~^~~~~~~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:5341:24: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
5341 | wntqo && *m >= *n && *ldvt < *n) {
| ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c: In function 'dhseqr_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:7768:34: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
7768 | } else if (*ldz < 1 || wantz && *ldz < max(1,*n)) {
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c: In function 'dlaexc_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:13223:8: warning: suggest parentheses around '+' inside '<<' [-Wparentheses]
13223 | (*n1 + 1 << 2) - 5], &c__4, &d__[(*n1 + 1 << 2) - 4], &c__4, &
| ~~~~^~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:13223:41: warning: suggest parentheses around '+' inside '<<' [-Wparentheses]
13223 | (*n1 + 1 << 2) - 5], &c__4, &d__[(*n1 + 1 << 2) - 4], &c__4, &
| ~~~~^~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c: In function 'dlaqr0_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:17755:45: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
17755 | if (ld == 0 || ld * 100 <= nw * nibble && kbot - ktop + 1 > min(
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c: In function 'dlaqr4_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:20024:45: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
20024 | if (ld == 0 || ld * 100 <= nw * nibble && kbot - ktop + 1 > min(
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c: In function 'dlaqr5_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:20637:45: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
20637 | h__[k + 3 + (k + 1) * h_dim1] == 0. && h__[k + 3
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
20638 | + (k + 2) * h_dim1] == 0.)) {
| ~~~~~~~~~~~~~~~~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c: In function 'dlascl_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:23732:37: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
23732 | } else if (*n < 0 || itype == 4 && *n != *m || itype == 5 && *n != *m) {
| ~~~~~~~~~~~^~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:23732:63: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
23732 | } else if (*n < 0 || itype == 4 && *n != *m || itype == 5 && *n != *m) {
| ~~~~~~~~~~~^~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:23744:69: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
23744 | if (*ku < 0 || *ku > max(i__1,0) || (itype == 4 || itype == 5) &&
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~
23745 | *kl != *ku) {
| ~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:23747:28: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
23747 | } else if (itype == 4 && *lda < *kl + 1 || itype == 5 && *lda < *
| ~~~~~~~~~~~^~~~~~~~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:23748:28: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
23748 | ku + 1 || itype == 6 && *lda < (*kl << 1) + *ku + 1) {
| ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c: In function 'dlasdq_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:28444:27: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
28444 | } else if (*ncvt == 0 && *ldvt < 1 || *ncvt > 0 && *ldvt < max(1,*n)) {
| ~~~~~~~~~~~^~~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:28448:26: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
28448 | } else if (*ncc == 0 && *ldc < 1 || *ncc > 0 && *ldc < max(1,*n)) {
| ~~~~~~~~~~^~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c: In function 'dlasq2_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:29218:15: warning: suggest parentheses around '-' inside '<<' [-Wparentheses]
29218 | i__1 = *n - 1 << 1;
| ~~~^~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:29297:12: warning: suggest parentheses around '+' inside '<<' [-Wparentheses]
29297 | ipn4 = i0 + n0 << 2;
| ~~~^~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:29298:17: warning: suggest parentheses around '-' inside '<<' [-Wparentheses]
29298 | i__1 = i0 + n0 - 1 << 1;
| ~~~~~~~~^~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:29318:16: warning: suggest parentheses around '-' inside '<<' [-Wparentheses]
29318 | for (i4 = (n0 - 1 << 2) + pp; i4 >= i__1; i4 += -4) {
| ~~~^~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:29332:13: warning: suggest parentheses around '-' inside '<<' [-Wparentheses]
29332 | i__1 = (n0 - 1 << 2) + pp;
| ~~~^~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:29386:15: warning: suggest parentheses around '-' inside '<<' [-Wparentheses]
29386 | ndiv = n0 - i0 << 1;
| ~~~^~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:29490:17: warning: suggest parentheses around '-' inside '<<' [-Wparentheses]
29490 | i__3 = n0 - 3 << 2;
| ~~~^~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c: In function 'dlasq5_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:29661:17: warning: suggest parentheses around '-' inside '<<' [-Wparentheses]
29661 | i__1 = *n0 - 3 << 2;
| ~~~~^~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:29674:17: warning: suggest parentheses around '-' inside '<<' [-Wparentheses]
29674 | i__1 = *n0 - 3 << 2;
| ~~~~^~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:29692:12: warning: suggest parentheses around '-' inside '<<' [-Wparentheses]
29692 | j4 = (*n0 - 2 << 2) - *pp;
| ~~~~^~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:29712:17: warning: suggest parentheses around '-' inside '<<' [-Wparentheses]
29712 | i__1 = *n0 - 3 << 2;
| ~~~~^~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:29728:17: warning: suggest parentheses around '-' inside '<<' [-Wparentheses]
29728 | i__1 = *n0 - 3 << 2;
| ~~~~^~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:29749:12: warning: suggest parentheses around '-' inside '<<' [-Wparentheses]
29749 | j4 = (*n0 - 2 << 2) - *pp;
| ~~~~^~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c: In function 'dlasq6_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:29863:13: warning: suggest parentheses around '-' inside '<<' [-Wparentheses]
29863 | i__1 = *n0 - 3 << 2;
| ~~~~^~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:29887:13: warning: suggest parentheses around '-' inside '<<' [-Wparentheses]
29887 | i__1 = *n0 - 3 << 2;
| ~~~~^~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:29916:15: warning: suggest parentheses around '-' inside '<<' [-Wparentheses]
29916 | j4 = (*n0 - 2 << 2) - *pp;
| ~~~~^~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c: In function 'dlazq3_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:32091:17: warning: suggest parentheses around '+' inside '<<' [-Wparentheses]
32091 | ipn4 = *i0 + *n0 << 2;
| ~~~~^~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:32092:23: warning: suggest parentheses around '-' inside '<<' [-Wparentheses]
32092 | i__1 = *i0 + *n0 - 1 << 1;
| ~~~~~~~~~~^~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:32159:53: warning: suggest parentheses around '-' inside '<<' [-Wparentheses]
32159 | } else if (*dmin__ < 0. && *dmin1 > 0. && z__[(*n0 - 1 << 2) - *pp] <
| ~~~~^~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:32164:15: warning: suggest parentheses around '-' inside '<<' [-Wparentheses]
32164 | z__[(*n0 - 1 << 2) - *pp + 2] = 0.;
| ~~~~^~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c: In function 'dorgbr_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:32887:32: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
32887 | } else if (*n < 0 || wantq && (*n > *m || *n < min(*m,*k)) || ! wantq && (
| ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:32887:75: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
32887 | } else if (*n < 0 || wantq && (*n > *m || *n < min(*m,*k)) || ! wantq && (
| ~~~~~~~~^~~~
32888 | *m > *n || *m < min(*n,*k))) {
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c: In function 'dorm2l_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:34048:14: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
34048 | if (left && notran || ! left && ! notran) {
| ~~~~~^~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c: In function 'dorm2r_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:34249:14: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
34249 | if (left && ! notran || ! left && notran) {
| ~~~~~^~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c: In function 'dormbr_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:34489:13: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
34489 | if (applyq && *lda < max(1,nq) || ! applyq && *lda < max(i__1,i__2)) {
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c: In function 'dorml2_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:34786:14: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
34786 | if (left && notran || ! left && ! notran) {
| ~~~~~^~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c: In function 'dormlq_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:35078:11: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
35078 | if (left && notran || ! left && ! notran) {
| ~~~~~^~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c: In function 'dormql_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:35391:11: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
35391 | if (left && notran || ! left && ! notran) {
| ~~~~~^~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c: In function 'dormqr_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:35689:11: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
35689 | if (left && ! notran || ! left && notran) {
| ~~~~~^~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c: In function 'dstedc_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:36623:39: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
36623 | } else if (*ldz < 1 || icompz > 0 && *ldz < max(1,*n)) {
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:36638:17: warning: suggest parentheses around '-' inside '<<' [-Wparentheses]
36638 | lwmin = *n - 1 << 1;
| ~~~^~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c: In function 'dsteqr_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:37043:39: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
37043 | } else if (*ldz < 1 || icompz > 0 && *ldz < max(1,*n)) {
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c: In function 'dtrevc_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:39115:35: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
39115 | } else if (*ldvl < 1 || leftv && *ldvl < *n) {
| ~~~~~~^~~~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:39117:36: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
39117 | } else if (*ldvr < 1 || rightv && *ldvr < *n) {
| ~~~~~~~^~~~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c: In function 'dtrexc_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:40230:34: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
40230 | } else if (*ldq < 1 || wantq && *ldq < max(1,*n)) {
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c: In function 'ilaenv_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:40822:16: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
40822 | if (ic >= 129 && ic <= 137 || ic >= 145 && ic <= 153 || ic >= 162 &&
| ~~~~~~~~~~^~~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:40822:68: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
40822 | if (ic >= 129 && ic <= 137 || ic >= 145 && ic <= 153 || ic >= 162 &&
| ~~~~~~~~~~^~
40823 | ic <= 169) {
| ~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:40827:17: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
40827 | if (ic >= 129 && ic <= 137 || ic >= 145 && ic <= 153 || ic >=
| ~~~~~~~~~~^~~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:40828:8: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
40827 | if (ic >= 129 && ic <= 137 || ic >= 145 && ic <= 153 || ic >=
| ~~~~~
40828 | 162 && ic <= 169) {
| ~~~~^~~~~~~~~~~~
In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
from /build/nipy-0.4.3~rc1/lib/fff_python_wrapper/fffpy.h:2,
from /build/nipy-0.4.3~rc1/lib/fff_python_wrapper/fffpy.c:1:
/usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
/build/nipy-0.4.3~rc1/lib/fff_python_wrapper/fffpy.c: In function 'fffpy_import_array':
/build/nipy-0.4.3~rc1/lib/fff_python_wrapper/fffpy.c:17:3: warning: returning 'void *' from a function with return type 'IMP_OUT' {aka 'int'} makes integer from pointer without a cast [-Wint-conversion]
17 | import_array();
| ^~~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/fff_python_wrapper/fffpy.c: In function '_fff_vector_new_from_buffer':
/build/nipy-0.4.3~rc1/lib/fff_python_wrapper/fffpy.c:68:40: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
68 | if ((type == NPY_DOUBLE) && (itemsize==sizeof_double)) {
| ^~
/build/nipy-0.4.3~rc1/lib/fff_python_wrapper/fffpy.c: In function 'fffpy_multi_iterator_delete':
/build/nipy-0.4.3~rc1/lib/fff_python_wrapper/fffpy.c:591:13: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare]
591 | for(i=0; i<thisone->narr; i++)
| ^
/build/nipy-0.4.3~rc1/lib/fff_python_wrapper/fffpy.c: In function 'fffpy_multi_iterator_update':
/build/nipy-0.4.3~rc1/lib/fff_python_wrapper/fffpy.c:603:13: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare]
603 | for(i=0; i<thisone->narr; i++)
| ^
/build/nipy-0.4.3~rc1/lib/fff_python_wrapper/fffpy.c: In function 'fffpy_multi_iterator_reset':
/build/nipy-0.4.3~rc1/lib/fff_python_wrapper/fffpy.c:614:13: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare]
614 | for(i=0; i<thisone->narr; i++)
| ^
/build/nipy-0.4.3~rc1/lib/fff_python_wrapper/fffpy.c: In function 'fffpy_import_array':
/build/nipy-0.4.3~rc1/lib/fff_python_wrapper/fffpy.c:18:1: warning: control reaches end of non-void function [-Wreturn-type]
18 | }
| ^
x86_64-linux-gnu-gcc-ar: adding 18 object files to build/temp.linux-x86_64-3.9/libcstat.a
running build_ext
customize UnixCCompiler
customize UnixCCompiler using MyBuildExt
building 'nipy.algorithms.registration._registration' extension
compiling C sources
C compiler: x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/build/nipy-0.4.3~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC
creating build/temp.linux-x86_64-3.9/build/src.linux-x86_64-3.9
creating build/temp.linux-x86_64-3.9/build/src.linux-x86_64-3.9/nipy
creating build/temp.linux-x86_64-3.9/build/src.linux-x86_64-3.9/nipy/algorithms
creating build/temp.linux-x86_64-3.9/build/src.linux-x86_64-3.9/nipy/algorithms/registration
creating build/temp.linux-x86_64-3.9/nipy
creating build/temp.linux-x86_64-3.9/nipy/algorithms
creating build/temp.linux-x86_64-3.9/nipy/algorithms/registration
compile options: '-I/usr/lib/python3/dist-packages/numpy/core/include -Inipy/algorithms/registration -Inipy/algorithms/slicetiming -Inipy/algorithms/segmentation -Inipy/algorithms/statistics -I/build/nipy-0.4.3~rc1/lib/fff -I/build/nipy-0.4.3~rc1/lib/fff_python_wrapper -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.9 -c'
x86_64-linux-gnu-gcc: build/src.linux-x86_64-3.9/nipy/algorithms/registration/_registration.c
x86_64-linux-gnu-gcc: nipy/algorithms/registration/joint_histogram.c
x86_64-linux-gnu-gcc: nipy/algorithms/registration/wichmann_prng.c
x86_64-linux-gnu-gcc: nipy/algorithms/registration/cubic_spline.c
x86_64-linux-gnu-gcc: nipy/algorithms/registration/polyaffine.c
In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
from nipy/algorithms/registration/polyaffine.h:16,
from nipy/algorithms/registration/polyaffine.c:1:
/usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
from nipy/algorithms/registration/joint_histogram.h:27,
from nipy/algorithms/registration/joint_histogram.c:1:
/usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
nipy/algorithms/registration/joint_histogram.c: In function 'L1_moments':
nipy/algorithms/registration/joint_histogram.c:358:14: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
358 | for (i=0; i<size; i++, buf+=offset)
| ^
nipy/algorithms/registration/joint_histogram.c:398:13: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
398 | if (med < size) {
| ^
nipy/algorithms/registration/joint_histogram.c:400:20: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
400 | for (i=med; i<size; i ++, buf += offset)
| ^
In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
from nipy/algorithms/registration/cubic_spline.h:35,
from nipy/algorithms/registration/cubic_spline.c:1:
/usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
nipy/algorithms/registration/cubic_spline.c: In function '_cubic_spline_transform1d':
nipy/algorithms/registration/cubic_spline.c:107:14: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
107 | for (k=1; k<dim; k++) {
| ^
nipy/algorithms/registration/cubic_spline.c:114:14: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
114 | for (k=2; k<dim; k++) {
| ^
nipy/algorithms/registration/cubic_spline.c:131:14: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
131 | for (k=1; k<dim; k++) {
| ^
nipy/algorithms/registration/cubic_spline.c:144:14: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
144 | for (k=1; k<dim; k++) {
| ^
nipy/algorithms/registration/cubic_spline.c: In function 'cubic_spline_transform':
nipy/algorithms/registration/cubic_spline.c:205:19: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare]
205 | for(axis=0; axis<res->nd; axis++) {
| ^
nipy/algorithms/registration/cubic_spline.c:215:19: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare]
215 | for(axis=0; axis<res->nd; axis++)
| ^
nipy/algorithms/registration/cubic_spline.c: In function '_mirrored_position':
nipy/algorithms/registration/cubic_spline.c:634:14: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
634 | else if (x > ddim)
| ^
nipy/algorithms/registration/cubic_spline.c: In function '_mirror_grid_neighbors':
nipy/algorithms/registration/cubic_spline.c:690:23: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
690 | if ((*px>=3) && (*px<=3*ddim)) {
| ^~
nipy/algorithms/registration/cubic_spline.c: In function '_neighbors_zero_outside':
nipy/algorithms/registration/cubic_spline.c:717:14: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
717 | if (*px>dim) { /* ddim<=x<dim, px=dim+1 */
| ^
In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
from build/src.linux-x86_64-3.9/nipy/algorithms/registration/_registration.c:611:
/usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/build/nipy-0.4.3~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.9/build/src.linux-x86_64-3.9/nipy/algorithms/registration/_registration.o build/temp.linux-x86_64-3.9/nipy/algorithms/registration/joint_histogram.o build/temp.linux-x86_64-3.9/nipy/algorithms/registration/wichmann_prng.o build/temp.linux-x86_64-3.9/nipy/algorithms/registration/cubic_spline.o build/temp.linux-x86_64-3.9/nipy/algorithms/registration/polyaffine.o -Lbuild/temp.linux-x86_64-3.9 -o /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/registration/_registration.cpython-39-x86_64-linux-gnu.so
building 'nipy.algorithms.segmentation._segmentation' extension
compiling C sources
C compiler: x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/build/nipy-0.4.3~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC
creating build/temp.linux-x86_64-3.9/build/src.linux-x86_64-3.9/nipy/algorithms/segmentation
creating build/temp.linux-x86_64-3.9/nipy/algorithms/segmentation
compile options: '-I/usr/lib/python3/dist-packages/numpy/core/include -Inipy/algorithms/registration -Inipy/algorithms/slicetiming -Inipy/algorithms/segmentation -Inipy/algorithms/statistics -I/build/nipy-0.4.3~rc1/lib/fff -I/build/nipy-0.4.3~rc1/lib/fff_python_wrapper -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.9 -c'
x86_64-linux-gnu-gcc: build/src.linux-x86_64-3.9/nipy/algorithms/segmentation/_segmentation.c
x86_64-linux-gnu-gcc: nipy/algorithms/segmentation/mrf.c
In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
from nipy/algorithms/segmentation/mrf.h:16,
from nipy/algorithms/segmentation/mrf.c:1:
/usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
from build/src.linux-x86_64-3.9/nipy/algorithms/segmentation/_segmentation.c:611:
/usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/build/nipy-0.4.3~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.9/build/src.linux-x86_64-3.9/nipy/algorithms/segmentation/_segmentation.o build/temp.linux-x86_64-3.9/nipy/algorithms/segmentation/mrf.o -Lbuild/temp.linux-x86_64-3.9 -o /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/segmentation/_segmentation.cpython-39-x86_64-linux-gnu.so
building 'nipy.algorithms.statistics.intvol' extension
compiling C sources
C compiler: x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/build/nipy-0.4.3~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC
creating build/temp.linux-x86_64-3.9/build/src.linux-x86_64-3.9/nipy/algorithms/statistics
compile options: '-I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/lib/python3/dist-packages/numpy/core/include -Inipy/algorithms/registration -Inipy/algorithms/slicetiming -Inipy/algorithms/segmentation -Inipy/algorithms/statistics -I/build/nipy-0.4.3~rc1/lib/fff -I/build/nipy-0.4.3~rc1/lib/fff_python_wrapper -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.9 -c'
x86_64-linux-gnu-gcc: build/src.linux-x86_64-3.9/nipy/algorithms/statistics/intvol.c
In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
from build/src.linux-x86_64-3.9/nipy/algorithms/statistics/intvol.c:610:
/usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/build/nipy-0.4.3~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.9/build/src.linux-x86_64-3.9/nipy/algorithms/statistics/intvol.o -Lbuild/temp.linux-x86_64-3.9 -o /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/statistics/intvol.cpython-39-x86_64-linux-gnu.so
building 'nipy.algorithms.statistics.histogram' extension
compiling C sources
C compiler: x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/build/nipy-0.4.3~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC
compile options: '-I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/lib/python3/dist-packages/numpy/core/include -Inipy/algorithms/registration -Inipy/algorithms/slicetiming -Inipy/algorithms/segmentation -Inipy/algorithms/statistics -I/build/nipy-0.4.3~rc1/lib/fff -I/build/nipy-0.4.3~rc1/lib/fff_python_wrapper -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.9 -c'
x86_64-linux-gnu-gcc: build/src.linux-x86_64-3.9/nipy/algorithms/statistics/histogram.c
In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
from build/src.linux-x86_64-3.9/nipy/algorithms/statistics/histogram.c:610:
/usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/build/nipy-0.4.3~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.9/build/src.linux-x86_64-3.9/nipy/algorithms/statistics/histogram.o -Lbuild/temp.linux-x86_64-3.9 -o /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/statistics/histogram.cpython-39-x86_64-linux-gnu.so
building 'nipy.algorithms.statistics._quantile' extension
compiling C sources
C compiler: x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/build/nipy-0.4.3~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC
creating build/temp.linux-x86_64-3.9/nipy/algorithms/statistics
compile options: '-I/usr/lib/python3/dist-packages/numpy/core/include -Inipy/algorithms/registration -Inipy/algorithms/slicetiming -Inipy/algorithms/segmentation -Inipy/algorithms/statistics -I/build/nipy-0.4.3~rc1/lib/fff -I/build/nipy-0.4.3~rc1/lib/fff_python_wrapper -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.9 -c'
x86_64-linux-gnu-gcc: build/src.linux-x86_64-3.9/nipy/algorithms/statistics/_quantile.c
x86_64-linux-gnu-gcc: nipy/algorithms/statistics/quantile.c
In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
from nipy/algorithms/statistics/quantile.h:9,
from nipy/algorithms/statistics/quantile.c:1:
/usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:21,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
from nipy/algorithms/statistics/quantile.h:9,
from nipy/algorithms/statistics/quantile.c:1:
/usr/lib/python3/dist-packages/numpy/core/include/numpy/__multiarray_api.h:1463:1: warning: '_import_array' defined but not used [-Wunused-function]
1463 | _import_array(void)
| ^~~~~~~~~~~~~
In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
from build/src.linux-x86_64-3.9/nipy/algorithms/statistics/_quantile.c:610:
/usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/build/nipy-0.4.3~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.9/build/src.linux-x86_64-3.9/nipy/algorithms/statistics/_quantile.o build/temp.linux-x86_64-3.9/nipy/algorithms/statistics/quantile.o -Lbuild/temp.linux-x86_64-3.9 -o /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/statistics/_quantile.cpython-39-x86_64-linux-gnu.so
building 'nipy.algorithms.graph._graph' extension
compiling C sources
C compiler: x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/build/nipy-0.4.3~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC
creating build/temp.linux-x86_64-3.9/nipy/algorithms/graph
compile options: '-I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/lib/python3/dist-packages/numpy/core/include -Inipy/algorithms/registration -Inipy/algorithms/slicetiming -Inipy/algorithms/segmentation -Inipy/algorithms/statistics -I/build/nipy-0.4.3~rc1/lib/fff -I/build/nipy-0.4.3~rc1/lib/fff_python_wrapper -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.9 -c'
x86_64-linux-gnu-gcc: nipy/algorithms/graph/_graph.c
In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
from nipy/algorithms/graph/_graph.c:256:
/usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
nipy/algorithms/graph/_graph.c: In function '__Pyx_ParseOptionalKeywords':
nipy/algorithms/graph/_graph.c:3880:21: warning: '_PyUnicode_get_wstr_length' is deprecated [-Wdeprecated-declarations]
3880 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 :
| ^
In file included from /usr/include/python3.9/unicodeobject.h:1026,
from /usr/include/python3.9/Python.h:97,
from nipy/algorithms/graph/_graph.c:4:
/usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here
446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) {
| ^~~~~~~~~~~~~~~~~~~~~~~~~~
nipy/algorithms/graph/_graph.c:3880:21: warning: 'PyUnicode_AsUnicode' is deprecated [-Wdeprecated-declarations]
3880 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 :
| ^
In file included from /usr/include/python3.9/unicodeobject.h:1026,
from /usr/include/python3.9/Python.h:97,
from nipy/algorithms/graph/_graph.c:4:
/usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here
580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode(
| ^~~~~~~~~~~~~~~~~~~
nipy/algorithms/graph/_graph.c:3880:21: warning: '_PyUnicode_get_wstr_length' is deprecated [-Wdeprecated-declarations]
3880 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 :
| ^
In file included from /usr/include/python3.9/unicodeobject.h:1026,
from /usr/include/python3.9/Python.h:97,
from nipy/algorithms/graph/_graph.c:4:
/usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here
446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) {
| ^~~~~~~~~~~~~~~~~~~~~~~~~~
nipy/algorithms/graph/_graph.c:3880:21: warning: '_PyUnicode_get_wstr_length' is deprecated [-Wdeprecated-declarations]
3880 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 :
| ^
In file included from /usr/include/python3.9/unicodeobject.h:1026,
from /usr/include/python3.9/Python.h:97,
from nipy/algorithms/graph/_graph.c:4:
/usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here
446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) {
| ^~~~~~~~~~~~~~~~~~~~~~~~~~
nipy/algorithms/graph/_graph.c:3880:21: warning: 'PyUnicode_AsUnicode' is deprecated [-Wdeprecated-declarations]
3880 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 :
| ^
In file included from /usr/include/python3.9/unicodeobject.h:1026,
from /usr/include/python3.9/Python.h:97,
from nipy/algorithms/graph/_graph.c:4:
/usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here
580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode(
| ^~~~~~~~~~~~~~~~~~~
nipy/algorithms/graph/_graph.c:3880:21: warning: '_PyUnicode_get_wstr_length' is deprecated [-Wdeprecated-declarations]
3880 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 :
| ^
In file included from /usr/include/python3.9/unicodeobject.h:1026,
from /usr/include/python3.9/Python.h:97,
from nipy/algorithms/graph/_graph.c:4:
/usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here
446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) {
| ^~~~~~~~~~~~~~~~~~~~~~~~~~
nipy/algorithms/graph/_graph.c:3896:25: warning: '_PyUnicode_get_wstr_length' is deprecated [-Wdeprecated-declarations]
3896 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 :
| ^
In file included from /usr/include/python3.9/unicodeobject.h:1026,
from /usr/include/python3.9/Python.h:97,
from nipy/algorithms/graph/_graph.c:4:
/usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here
446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) {
| ^~~~~~~~~~~~~~~~~~~~~~~~~~
nipy/algorithms/graph/_graph.c:3896:25: warning: 'PyUnicode_AsUnicode' is deprecated [-Wdeprecated-declarations]
3896 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 :
| ^
In file included from /usr/include/python3.9/unicodeobject.h:1026,
from /usr/include/python3.9/Python.h:97,
from nipy/algorithms/graph/_graph.c:4:
/usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here
580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode(
| ^~~~~~~~~~~~~~~~~~~
nipy/algorithms/graph/_graph.c:3896:25: warning: '_PyUnicode_get_wstr_length' is deprecated [-Wdeprecated-declarations]
3896 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 :
| ^
In file included from /usr/include/python3.9/unicodeobject.h:1026,
from /usr/include/python3.9/Python.h:97,
from nipy/algorithms/graph/_graph.c:4:
/usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here
446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) {
| ^~~~~~~~~~~~~~~~~~~~~~~~~~
nipy/algorithms/graph/_graph.c:3896:25: warning: '_PyUnicode_get_wstr_length' is deprecated [-Wdeprecated-declarations]
3896 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 :
| ^
In file included from /usr/include/python3.9/unicodeobject.h:1026,
from /usr/include/python3.9/Python.h:97,
from nipy/algorithms/graph/_graph.c:4:
/usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here
446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) {
| ^~~~~~~~~~~~~~~~~~~~~~~~~~
nipy/algorithms/graph/_graph.c:3896:25: warning: 'PyUnicode_AsUnicode' is deprecated [-Wdeprecated-declarations]
3896 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 :
| ^
In file included from /usr/include/python3.9/unicodeobject.h:1026,
from /usr/include/python3.9/Python.h:97,
from nipy/algorithms/graph/_graph.c:4:
/usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here
580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode(
| ^~~~~~~~~~~~~~~~~~~
nipy/algorithms/graph/_graph.c:3896:25: warning: '_PyUnicode_get_wstr_length' is deprecated [-Wdeprecated-declarations]
3896 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 :
| ^
In file included from /usr/include/python3.9/unicodeobject.h:1026,
from /usr/include/python3.9/Python.h:97,
from nipy/algorithms/graph/_graph.c:4:
/usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here
446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) {
| ^~~~~~~~~~~~~~~~~~~~~~~~~~
nipy/algorithms/graph/_graph.c: In function '__Pyx_Raise':
nipy/algorithms/graph/_graph.c:4637:9: warning: 'PyEval_CallObjectWithKeywords' is deprecated [-Wdeprecated-declarations]
4637 | owned_instance = PyEval_CallObject(type, args);
| ^~~~~~~~~~~~~~
In file included from /usr/include/python3.9/Python.h:145,
from nipy/algorithms/graph/_graph.c:4:
/usr/include/python3.9/ceval.h:17:43: note: declared here
17 | Py_DEPRECATED(3.9) PyAPI_FUNC(PyObject *) PyEval_CallObjectWithKeywords(
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:21,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
from nipy/algorithms/graph/_graph.c:256:
At top level:
/usr/lib/python3/dist-packages/numpy/core/include/numpy/__multiarray_api.h:1463:1: warning: '_import_array' defined but not used [-Wunused-function]
1463 | _import_array(void)
| ^~~~~~~~~~~~~
x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/build/nipy-0.4.3~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.9/nipy/algorithms/graph/_graph.o -Lbuild/temp.linux-x86_64-3.9 -o /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/graph/_graph.cpython-39-x86_64-linux-gnu.so
building 'nipy.labs.bindings.linalg' extension
compiling C sources
C compiler: x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/build/nipy-0.4.3~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC
creating build/temp.linux-x86_64-3.9/build/src.linux-x86_64-3.9/nipy/labs
creating build/temp.linux-x86_64-3.9/build/src.linux-x86_64-3.9/nipy/labs/bindings
compile options: '-I/usr/lib/python3/dist-packages/numpy/core/include -Inipy/algorithms/registration -Inipy/algorithms/slicetiming -Inipy/algorithms/segmentation -Inipy/algorithms/statistics -I/build/nipy-0.4.3~rc1/lib/fff -I/build/nipy-0.4.3~rc1/lib/fff_python_wrapper -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.9 -c'
x86_64-linux-gnu-gcc: build/src.linux-x86_64-3.9/nipy/labs/bindings/linalg.c
In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
from build/src.linux-x86_64-3.9/nipy/labs/bindings/linalg.c:610:
/usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/build/nipy-0.4.3~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.9/build/src.linux-x86_64-3.9/nipy/labs/bindings/linalg.o -Lbuild/temp.linux-x86_64-3.9 -lcstat -o /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/bindings/linalg.cpython-39-x86_64-linux-gnu.so
building 'nipy.labs.bindings.array' extension
compiling C sources
C compiler: x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/build/nipy-0.4.3~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC
compile options: '-I/usr/lib/python3/dist-packages/numpy/core/include -Inipy/algorithms/registration -Inipy/algorithms/slicetiming -Inipy/algorithms/segmentation -Inipy/algorithms/statistics -I/build/nipy-0.4.3~rc1/lib/fff -I/build/nipy-0.4.3~rc1/lib/fff_python_wrapper -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.9 -c'
x86_64-linux-gnu-gcc: build/src.linux-x86_64-3.9/nipy/labs/bindings/array.c
In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
from build/src.linux-x86_64-3.9/nipy/labs/bindings/array.c:610:
/usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/build/nipy-0.4.3~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.9/build/src.linux-x86_64-3.9/nipy/labs/bindings/array.o -Lbuild/temp.linux-x86_64-3.9 -lcstat -o /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/bindings/array.cpython-39-x86_64-linux-gnu.so
building 'nipy.labs.bindings.wrapper' extension
compiling C sources
C compiler: x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/build/nipy-0.4.3~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC
compile options: '-I/usr/lib/python3/dist-packages/numpy/core/include -Inipy/algorithms/registration -Inipy/algorithms/slicetiming -Inipy/algorithms/segmentation -Inipy/algorithms/statistics -I/build/nipy-0.4.3~rc1/lib/fff -I/build/nipy-0.4.3~rc1/lib/fff_python_wrapper -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.9 -c'
x86_64-linux-gnu-gcc: build/src.linux-x86_64-3.9/nipy/labs/bindings/wrapper.c
In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
from build/src.linux-x86_64-3.9/nipy/labs/bindings/wrapper.c:610:
/usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
build/src.linux-x86_64-3.9/nipy/labs/bindings/wrapper.c: In function '__pyx_pf_4nipy_4labs_8bindings_7wrapper_12pass_vector_via_iterator':
build/src.linux-x86_64-3.9/nipy/labs/bindings/wrapper.c:2950:40: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
2950 | __pyx_t_4 = ((__pyx_v_multi->index < __pyx_v_niters) != 0);
| ^
x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/build/nipy-0.4.3~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.9/build/src.linux-x86_64-3.9/nipy/labs/bindings/wrapper.o -Lbuild/temp.linux-x86_64-3.9 -lcstat -o /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/bindings/wrapper.cpython-39-x86_64-linux-gnu.so
building 'nipy.labs.glm.kalman' extension
compiling C sources
C compiler: x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/build/nipy-0.4.3~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC
creating build/temp.linux-x86_64-3.9/build/src.linux-x86_64-3.9/nipy/labs/glm
compile options: '-I/usr/lib/python3/dist-packages/numpy/core/include -Inipy/algorithms/registration -Inipy/algorithms/slicetiming -Inipy/algorithms/segmentation -Inipy/algorithms/statistics -I/build/nipy-0.4.3~rc1/lib/fff -I/build/nipy-0.4.3~rc1/lib/fff_python_wrapper -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.9 -c'
x86_64-linux-gnu-gcc: build/src.linux-x86_64-3.9/nipy/labs/glm/kalman.c
In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
from build/src.linux-x86_64-3.9/nipy/labs/glm/kalman.c:610:
/usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/build/nipy-0.4.3~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.9/build/src.linux-x86_64-3.9/nipy/labs/glm/kalman.o -Lbuild/temp.linux-x86_64-3.9 -lcstat -o /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/glm/kalman.cpython-39-x86_64-linux-gnu.so
building 'nipy.labs.group.onesample' extension
compiling C sources
C compiler: x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/build/nipy-0.4.3~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC
creating build/temp.linux-x86_64-3.9/build/src.linux-x86_64-3.9/nipy/labs/group
compile options: '-I/usr/lib/python3/dist-packages/numpy/core/include -Inipy/algorithms/registration -Inipy/algorithms/slicetiming -Inipy/algorithms/segmentation -Inipy/algorithms/statistics -I/build/nipy-0.4.3~rc1/lib/fff -I/build/nipy-0.4.3~rc1/lib/fff_python_wrapper -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.9 -c'
x86_64-linux-gnu-gcc: build/src.linux-x86_64-3.9/nipy/labs/group/onesample.c
In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
from build/src.linux-x86_64-3.9/nipy/labs/group/onesample.c:610:
/usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/build/nipy-0.4.3~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.9/build/src.linux-x86_64-3.9/nipy/labs/group/onesample.o -Lbuild/temp.linux-x86_64-3.9 -lcstat -o /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/group/onesample.cpython-39-x86_64-linux-gnu.so
building 'nipy.labs.group.twosample' extension
compiling C sources
C compiler: x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/build/nipy-0.4.3~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC
compile options: '-I/usr/lib/python3/dist-packages/numpy/core/include -Inipy/algorithms/registration -Inipy/algorithms/slicetiming -Inipy/algorithms/segmentation -Inipy/algorithms/statistics -I/build/nipy-0.4.3~rc1/lib/fff -I/build/nipy-0.4.3~rc1/lib/fff_python_wrapper -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.9 -c'
x86_64-linux-gnu-gcc: build/src.linux-x86_64-3.9/nipy/labs/group/twosample.c
In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
from build/src.linux-x86_64-3.9/nipy/labs/group/twosample.c:610:
/usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/build/nipy-0.4.3~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.9/build/src.linux-x86_64-3.9/nipy/labs/group/twosample.o -Lbuild/temp.linux-x86_64-3.9 -lcstat -o /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/group/twosample.cpython-39-x86_64-linux-gnu.so
building 'nipy.labs.group.glm_twolevel' extension
compiling C sources
C compiler: x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/build/nipy-0.4.3~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC
compile options: '-I/usr/lib/python3/dist-packages/numpy/core/include -Inipy/algorithms/registration -Inipy/algorithms/slicetiming -Inipy/algorithms/segmentation -Inipy/algorithms/statistics -I/build/nipy-0.4.3~rc1/lib/fff -I/build/nipy-0.4.3~rc1/lib/fff_python_wrapper -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.9 -c'
x86_64-linux-gnu-gcc: build/src.linux-x86_64-3.9/nipy/labs/group/glm_twolevel.c
In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
from build/src.linux-x86_64-3.9/nipy/labs/group/glm_twolevel.c:610:
/usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/build/nipy-0.4.3~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.9/build/src.linux-x86_64-3.9/nipy/labs/group/glm_twolevel.o -Lbuild/temp.linux-x86_64-3.9 -lcstat -o /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/group/glm_twolevel.cpython-39-x86_64-linux-gnu.so
building 'nipy.labs.utils.routines' extension
compiling C sources
C compiler: x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/build/nipy-0.4.3~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC
creating build/temp.linux-x86_64-3.9/build/src.linux-x86_64-3.9/nipy/labs/utils
compile options: '-I/usr/lib/python3/dist-packages/numpy/core/include -Inipy/algorithms/registration -Inipy/algorithms/slicetiming -Inipy/algorithms/segmentation -Inipy/algorithms/statistics -I/build/nipy-0.4.3~rc1/lib/fff -I/build/nipy-0.4.3~rc1/lib/fff_python_wrapper -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.9 -c'
x86_64-linux-gnu-gcc: build/src.linux-x86_64-3.9/nipy/labs/utils/routines.c
In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
from build/src.linux-x86_64-3.9/nipy/labs/utils/routines.c:610:
/usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/build/nipy-0.4.3~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.9/build/src.linux-x86_64-3.9/nipy/labs/utils/routines.o -Lbuild/temp.linux-x86_64-3.9 -lcstat -o /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/utils/routines.cpython-39-x86_64-linux-gnu.so
________________________________________________________________________________
Could not find datasource "nipy/templates" in data path "/usr/share/nipy:/usr/local/share/nipy:/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/.nipy"; Is it possible you have not installed a data package?
You may need the package "nipy-templates"
You can download and install the package from:
http://nipy.org/data-packages/nipy-templates-0.2.tar.gz
Check the instructions in the ``doc/users/install_data.rst`` file in the nipy
source tree, or online at http://nipy.org/nipy/users/install_data.html
If you have the package, have you set the path to the package correctly?
________________________________________________________________________________
Could not find datasource "nipy/data" in data path "/usr/share/nipy:/usr/local/share/nipy:/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/.nipy"; Is it possible you have not installed a data package?
You may need the package "nipy-data"
You can download and install the package from:
http://nipy.org/data-packages/nipy-data-0.2.tar.gz
Check the instructions in the ``doc/users/install_data.rst`` file in the nipy
source tree, or online at http://nipy.org/nipy/users/install_data.html
If you have the package, have you set the path to the package correctly?
running build_scripts
creating build/scripts.linux-x86_64-3.9
copying and adjusting scripts/nipy_diagnose -> build/scripts.linux-x86_64-3.9
copying and adjusting scripts/nipy_3dto4d -> build/scripts.linux-x86_64-3.9
copying and adjusting scripts/nipy_4d_realign -> build/scripts.linux-x86_64-3.9
copying and adjusting scripts/nipy_4dto3d -> build/scripts.linux-x86_64-3.9
copying and adjusting scripts/nipy_tsdiffana -> build/scripts.linux-x86_64-3.9
changing mode of build/scripts.linux-x86_64-3.9/nipy_diagnose from 644 to 755
changing mode of build/scripts.linux-x86_64-3.9/nipy_3dto4d from 644 to 755
changing mode of build/scripts.linux-x86_64-3.9/nipy_4d_realign from 644 to 755
changing mode of build/scripts.linux-x86_64-3.9/nipy_4dto3d from 644 to 755
changing mode of build/scripts.linux-x86_64-3.9/nipy_tsdiffana from 644 to 755
pybuild --build --test-nose -i python{version}-dbg -p "3.8 3.9"
I: pybuild base:232: /usr/bin/python3.8-dbg setup.py build
lapack_opt_info:
lapack_mkl_info:
customize UnixCCompiler
libraries mkl_rt not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
openblas_lapack_info:
libraries openblas not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
openblas_clapack_info:
libraries openblas,lapack not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
flame_info:
libraries flame not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
atlas_3_10_threads_info:
Setting PTATLAS=ATLAS
libraries lapack_atlas not found in /usr/local/lib
libraries tatlas,tatlas not found in /usr/local/lib
libraries lapack_atlas not found in /usr/lib
libraries tatlas,tatlas not found in /usr/lib
libraries lapack_atlas not found in /usr/lib/x86_64-linux-gnu
libraries tatlas,tatlas not found in /usr/lib/x86_64-linux-gnu
<class 'numpy.distutils.system_info.atlas_3_10_threads_info'>
NOT AVAILABLE
atlas_3_10_info:
libraries lapack_atlas not found in /usr/local/lib
libraries satlas,satlas not found in /usr/local/lib
libraries lapack_atlas not found in /usr/lib
libraries satlas,satlas not found in /usr/lib
libraries lapack_atlas not found in /usr/lib/x86_64-linux-gnu
libraries satlas,satlas not found in /usr/lib/x86_64-linux-gnu
<class 'numpy.distutils.system_info.atlas_3_10_info'>
NOT AVAILABLE
atlas_threads_info:
Setting PTATLAS=ATLAS
libraries lapack_atlas not found in /usr/local/lib
libraries ptf77blas,ptcblas,atlas not found in /usr/local/lib
libraries lapack_atlas not found in /usr/lib
libraries ptf77blas,ptcblas,atlas not found in /usr/lib
libraries lapack_atlas not found in /usr/lib/x86_64-linux-gnu
libraries ptf77blas,ptcblas,atlas not found in /usr/lib/x86_64-linux-gnu
<class 'numpy.distutils.system_info.atlas_threads_info'>
NOT AVAILABLE
atlas_info:
libraries lapack_atlas not found in /usr/local/lib
libraries f77blas,cblas,atlas not found in /usr/local/lib
libraries lapack_atlas not found in /usr/lib
libraries f77blas,cblas,atlas not found in /usr/lib
libraries lapack_atlas not found in /usr/lib/x86_64-linux-gnu
libraries f77blas,cblas,atlas not found in /usr/lib/x86_64-linux-gnu
<class 'numpy.distutils.system_info.atlas_info'>
NOT AVAILABLE
accelerate_info:
NOT AVAILABLE
lapack_info:
FOUND:
libraries = ['lapack', 'lapack']
library_dirs = ['/usr/lib/x86_64-linux-gnu']
language = f77
blas_opt_info:
blas_mkl_info:
libraries mkl_rt not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
blis_info:
libraries blis not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
openblas_info:
libraries openblas not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
atlas_3_10_blas_threads_info:
Setting PTATLAS=ATLAS
libraries tatlas not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
atlas_3_10_blas_info:
libraries satlas not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
atlas_blas_threads_info:
Setting PTATLAS=ATLAS
libraries ptf77blas,ptcblas,atlas not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
atlas_blas_info:
libraries f77blas,cblas,atlas not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
blas_info:
C compiler: x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -g -Og -Wall -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/build/nipy-0.4.3~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC
creating /tmp/tmpmum9jdc3/tmp
creating /tmp/tmpmum9jdc3/tmp/tmpmum9jdc3
compile options: '-I/usr/local/include -I/usr/include -c'
x86_64-linux-gnu-gcc: /tmp/tmpmum9jdc3/source.c
x86_64-linux-gnu-gcc -pthread /tmp/tmpmum9jdc3/tmp/tmpmum9jdc3/source.o -lblas -o /tmp/tmpmum9jdc3/a.out
FOUND:
libraries = ['blas', 'blas']
library_dirs = ['/usr/lib/x86_64-linux-gnu']
include_dirs = ['/usr/local/include', '/usr/include']
language = c
define_macros = [('HAVE_CBLAS', None)]
FOUND:
define_macros = [('NO_ATLAS_INFO', 1), ('HAVE_CBLAS', None)]
libraries = ['blas', 'blas']
library_dirs = ['/usr/lib/x86_64-linux-gnu']
include_dirs = ['/usr/local/include', '/usr/include']
language = c
FOUND:
libraries = ['lapack', 'lapack', 'blas', 'blas']
library_dirs = ['/usr/lib/x86_64-linux-gnu']
language = c
define_macros = [('NO_ATLAS_INFO', 1), ('HAVE_CBLAS', None)]
include_dirs = ['/usr/local/include', '/usr/include']
Building with (slow) Lapack lite distribution: set NIPY_EXTERNAL_LAPACK environment variable or use setup.cfg to enable link to optimized BLAS / LAPACK
LAPACK build options:
library_dirs: []
libraries: []
lapack_info: {'libraries': ['lapack', 'lapack', 'blas', 'blas'], 'library_dirs': ['/usr/lib/x86_64-linux-gnu'], 'language': 'c', 'define_macros': [('NO_ATLAS_INFO', 1), ('HAVE_CBLAS', None)], 'include_dirs': ['/usr/local/include', '/usr/include']}
running build
running config_cc
unifing config_cc, config, build_clib, build_ext, build commands --compiler options
running config_fc
unifing config_fc, config, build_clib, build_ext, build commands --fcompiler options
running build_src
build_src
building py_modules sources
building library "cstat" sources
building extension "nipy.algorithms.registration._registration" sources
building extension "nipy.algorithms.segmentation._segmentation" sources
building extension "nipy.algorithms.statistics.intvol" sources
building extension "nipy.algorithms.statistics.histogram" sources
building extension "nipy.algorithms.statistics._quantile" sources
building extension "nipy.algorithms.graph._graph" sources
building extension "nipy.labs.bindings.linalg" sources
building extension "nipy.labs.bindings.array" sources
building extension "nipy.labs.bindings.wrapper" sources
building extension "nipy.labs.glm.kalman" sources
building extension "nipy.labs.group.onesample" sources
building extension "nipy.labs.group.twosample" sources
building extension "nipy.labs.group.glm_twolevel" sources
building extension "nipy.labs.utils.routines" sources
building data_files sources
build_src: building npy-pkg config files
running build_py
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy
copying nipy/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy
copying nipy/setup.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy
copying nipy/info.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy
copying nipy/pkg_info.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy
copying build/src.linux-x86_64-3.8/nipy/__config__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms
copying nipy/algorithms/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms
copying nipy/algorithms/optimize.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms
copying nipy/algorithms/setup.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms
copying nipy/algorithms/resample.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms
copying nipy/algorithms/kernel_smooth.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms
copying nipy/algorithms/fwhm.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms
copying nipy/algorithms/interpolation.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/tests
copying nipy/algorithms/tests/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/tests
copying nipy/algorithms/tests/test_resample.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/tests
copying nipy/algorithms/tests/test_kernel_smooth.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/tests
copying nipy/algorithms/tests/test_interpolator.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/tests
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/registration
copying nipy/algorithms/registration/polyaffine.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/registration
copying nipy/algorithms/registration/similarity_measures.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/registration
copying nipy/algorithms/registration/transform.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/registration
copying nipy/algorithms/registration/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/registration
copying nipy/algorithms/registration/type_check.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/registration
copying nipy/algorithms/registration/setup.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/registration
copying nipy/algorithms/registration/chain_transform.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/registration
copying nipy/algorithms/registration/resample.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/registration
copying nipy/algorithms/registration/optimizer.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/registration
copying nipy/algorithms/registration/histogram_registration.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/registration
copying nipy/algorithms/registration/groupwise_registration.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/registration
copying nipy/algorithms/registration/affine.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/registration
copying nipy/algorithms/registration/scripting.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/registration
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/registration/tests
copying nipy/algorithms/registration/tests/test_scripting.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/registration/tests
copying nipy/algorithms/registration/tests/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/registration/tests
copying nipy/algorithms/registration/tests/test_cubic_spline.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/registration/tests
copying nipy/algorithms/registration/tests/test_affine.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/registration/tests
copying nipy/algorithms/registration/tests/test_resample.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/registration/tests
copying nipy/algorithms/registration/tests/test_histogram_registration.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/registration/tests
copying nipy/algorithms/registration/tests/test_register.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/registration/tests
copying nipy/algorithms/registration/tests/test_fmri_realign4d.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/registration/tests
copying nipy/algorithms/registration/tests/test_transform.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/registration/tests
copying nipy/algorithms/registration/tests/test_chain_transforms.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/registration/tests
copying nipy/algorithms/registration/tests/test_slice_timing.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/registration/tests
copying nipy/algorithms/registration/tests/test_polyaffine.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/registration/tests
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/slicetiming
copying nipy/algorithms/slicetiming/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/slicetiming
copying nipy/algorithms/slicetiming/setup.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/slicetiming
copying nipy/algorithms/slicetiming/timefuncs.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/slicetiming
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/slicetiming/tests
copying nipy/algorithms/slicetiming/tests/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/slicetiming/tests
copying nipy/algorithms/slicetiming/tests/test_timefuncs.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/slicetiming/tests
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/segmentation
copying nipy/algorithms/segmentation/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/segmentation
copying nipy/algorithms/segmentation/brain_segmentation.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/segmentation
copying nipy/algorithms/segmentation/setup.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/segmentation
copying nipy/algorithms/segmentation/segmentation.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/segmentation
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/segmentation/tests
copying nipy/algorithms/segmentation/tests/test_segmentation.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/segmentation/tests
copying nipy/algorithms/segmentation/tests/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/segmentation/tests
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/statistics
copying nipy/algorithms/statistics/bayesian_mixed_effects.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/statistics
copying nipy/algorithms/statistics/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/statistics
copying nipy/algorithms/statistics/setup.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/statistics
copying nipy/algorithms/statistics/empirical_pvalue.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/statistics
copying nipy/algorithms/statistics/utils.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/statistics
copying nipy/algorithms/statistics/onesample.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/statistics
copying nipy/algorithms/statistics/api.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/statistics
copying nipy/algorithms/statistics/rft.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/statistics
copying nipy/algorithms/statistics/mixed_effects_stat.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/statistics
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/statistics/models
copying nipy/algorithms/statistics/models/setupscons.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/statistics/models
copying nipy/algorithms/statistics/models/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/statistics/models
copying nipy/algorithms/statistics/models/nlsmodel.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/statistics/models
copying nipy/algorithms/statistics/models/setup.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/statistics/models
copying nipy/algorithms/statistics/models/info.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/statistics/models
copying nipy/algorithms/statistics/models/utils.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/statistics/models
copying nipy/algorithms/statistics/models/model.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/statistics/models
copying nipy/algorithms/statistics/models/regression.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/statistics/models
copying nipy/algorithms/statistics/models/glm.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/statistics/models
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/statistics/models/family
copying nipy/algorithms/statistics/models/family/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/statistics/models/family
copying nipy/algorithms/statistics/models/family/varfuncs.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/statistics/models/family
copying nipy/algorithms/statistics/models/family/links.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/statistics/models/family
copying nipy/algorithms/statistics/models/family/family.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/statistics/models/family
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/statistics/models/tests
copying nipy/algorithms/statistics/models/tests/test_anova.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/statistics/models/tests
copying nipy/algorithms/statistics/models/tests/test_glm.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/statistics/models/tests
copying nipy/algorithms/statistics/models/tests/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/statistics/models/tests
copying nipy/algorithms/statistics/models/tests/test_regression.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/statistics/models/tests
copying nipy/algorithms/statistics/models/tests/test_ar.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/statistics/models/tests
copying nipy/algorithms/statistics/models/tests/test_model.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/statistics/models/tests
copying nipy/algorithms/statistics/models/tests/exampledata.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/statistics/models/tests
copying nipy/algorithms/statistics/models/tests/test_olsR.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/statistics/models/tests
copying nipy/algorithms/statistics/models/tests/test_estimable.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/statistics/models/tests
copying nipy/algorithms/statistics/models/tests/test_utils.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/statistics/models/tests
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/statistics/formula
copying nipy/algorithms/statistics/formula/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/statistics/formula
copying nipy/algorithms/statistics/formula/setup.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/statistics/formula
copying nipy/algorithms/statistics/formula/formulae.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/statistics/formula
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/statistics/formula/tests
copying nipy/algorithms/statistics/formula/tests/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/statistics/formula/tests
copying nipy/algorithms/statistics/formula/tests/test_formula.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/statistics/formula/tests
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/statistics/bench
copying nipy/algorithms/statistics/bench/bench_intvol.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/statistics/bench
copying nipy/algorithms/statistics/bench/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/statistics/bench
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/statistics/tests
copying nipy/algorithms/statistics/tests/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/statistics/tests
copying nipy/algorithms/statistics/tests/test_mixed_effects.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/statistics/tests
copying nipy/algorithms/statistics/tests/test_rft.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/statistics/tests
copying nipy/algorithms/statistics/tests/test_intrinsic_volumes.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/statistics/tests
copying nipy/algorithms/statistics/tests/test_onesample.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/statistics/tests
copying nipy/algorithms/statistics/tests/test_quantile.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/statistics/tests
copying nipy/algorithms/statistics/tests/test_empirical_pvalue.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/statistics/tests
copying nipy/algorithms/statistics/tests/test_utils.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/statistics/tests
copying nipy/algorithms/statistics/tests/test_histogram.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/statistics/tests
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/diagnostics
copying nipy/algorithms/diagnostics/tsdiffplot.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/diagnostics
copying nipy/algorithms/diagnostics/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/diagnostics
copying nipy/algorithms/diagnostics/commands.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/diagnostics
copying nipy/algorithms/diagnostics/timediff.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/diagnostics
copying nipy/algorithms/diagnostics/setup.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/diagnostics
copying nipy/algorithms/diagnostics/screens.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/diagnostics
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/diagnostics/tests
copying nipy/algorithms/diagnostics/tests/test_time_difference.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/diagnostics/tests
copying nipy/algorithms/diagnostics/tests/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/diagnostics/tests
copying nipy/algorithms/diagnostics/tests/test_screen.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/diagnostics/tests
copying nipy/algorithms/diagnostics/tests/test_commands.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/diagnostics/tests
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/clustering
copying nipy/algorithms/clustering/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/clustering
copying nipy/algorithms/clustering/bgmm.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/clustering
copying nipy/algorithms/clustering/gmm.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/clustering
copying nipy/algorithms/clustering/von_mises_fisher_mixture.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/clustering
copying nipy/algorithms/clustering/setup.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/clustering
copying nipy/algorithms/clustering/ggmixture.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/clustering
copying nipy/algorithms/clustering/hierarchical_clustering.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/clustering
copying nipy/algorithms/clustering/utils.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/clustering
copying nipy/algorithms/clustering/imm.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/clustering
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/clustering/tests
copying nipy/algorithms/clustering/tests/test_vmm.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/clustering/tests
copying nipy/algorithms/clustering/tests/test_ggm.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/clustering/tests
copying nipy/algorithms/clustering/tests/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/clustering/tests
copying nipy/algorithms/clustering/tests/test_gmm.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/clustering/tests
copying nipy/algorithms/clustering/tests/test_bgmm.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/clustering/tests
copying nipy/algorithms/clustering/tests/test_imm.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/clustering/tests
copying nipy/algorithms/clustering/tests/test_hierarchical_clustering.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/clustering/tests
copying nipy/algorithms/clustering/tests/test_clustering.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/clustering/tests
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/utils
copying nipy/algorithms/utils/pca.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/utils
copying nipy/algorithms/utils/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/utils
copying nipy/algorithms/utils/setup.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/utils
copying nipy/algorithms/utils/fast_distance.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/utils
copying nipy/algorithms/utils/matrices.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/utils
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/utils/tests
copying nipy/algorithms/utils/tests/test_pca_image.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/utils/tests
copying nipy/algorithms/utils/tests/test_matrices.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/utils/tests
copying nipy/algorithms/utils/tests/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/utils/tests
copying nipy/algorithms/utils/tests/test_fast_distance.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/utils/tests
copying nipy/algorithms/utils/tests/test_pca.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/utils/tests
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/graph
copying nipy/algorithms/graph/field.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/graph
copying nipy/algorithms/graph/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/graph
copying nipy/algorithms/graph/setup.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/graph
copying nipy/algorithms/graph/bipartite_graph.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/graph
copying nipy/algorithms/graph/forest.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/graph
copying nipy/algorithms/graph/graph.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/graph
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/graph/tests
copying nipy/algorithms/graph/tests/test_field.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/graph/tests
copying nipy/algorithms/graph/tests/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/graph/tests
copying nipy/algorithms/graph/tests/test_forest.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/graph/tests
copying nipy/algorithms/graph/tests/test_graph.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/graph/tests
copying nipy/algorithms/graph/tests/test_bipartite_graph.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/graph/tests
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/group
copying nipy/algorithms/group/parcel_analysis.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/group
copying nipy/algorithms/group/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/group
copying nipy/algorithms/group/setup.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/group
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/group/tests
copying nipy/algorithms/group/tests/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/group/tests
copying nipy/algorithms/group/tests/test_parcel_analysis.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/group/tests
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/interfaces
copying nipy/interfaces/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/interfaces
copying nipy/interfaces/setup.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/interfaces
copying nipy/interfaces/spm.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/interfaces
copying nipy/interfaces/matlab.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/interfaces
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/interfaces/tests
copying nipy/interfaces/tests/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/interfaces/tests
copying nipy/interfaces/tests/test_mlabtemp.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/interfaces/tests
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/core
copying nipy/core/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/core
copying nipy/core/setup.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/core
copying nipy/core/api.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/core
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/core/image
copying nipy/core/image/image.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/core/image
copying nipy/core/image/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/core/image
copying nipy/core/image/roi.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/core/image
copying nipy/core/image/image_spaces.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/core/image
copying nipy/core/image/setup.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/core/image
copying nipy/core/image/image_list.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/core/image
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/core/image/tests
copying nipy/core/image/tests/test_image_list.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/core/image/tests
copying nipy/core/image/tests/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/core/image/tests
copying nipy/core/image/tests/test_image.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/core/image/tests
copying nipy/core/image/tests/test_rollimg.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/core/image/tests
copying nipy/core/image/tests/test_image_spaces.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/core/image/tests
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/core/utils
copying nipy/core/utils/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/core/utils
copying nipy/core/utils/setup.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/core/utils
copying nipy/core/utils/generators.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/core/utils
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/core/utils/tests
copying nipy/core/utils/tests/test_generators.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/core/utils/tests
copying nipy/core/utils/tests/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/core/utils/tests
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/core/reference
copying nipy/core/reference/coordinate_system.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/core/reference
copying nipy/core/reference/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/core/reference
copying nipy/core/reference/setup.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/core/reference
copying nipy/core/reference/spaces.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/core/reference
copying nipy/core/reference/coordinate_map.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/core/reference
copying nipy/core/reference/slices.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/core/reference
copying nipy/core/reference/array_coords.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/core/reference
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/core/reference/tests
copying nipy/core/reference/tests/test_parametrized_surface.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/core/reference/tests
copying nipy/core/reference/tests/matrix_groups.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/core/reference/tests
copying nipy/core/reference/tests/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/core/reference/tests
copying nipy/core/reference/tests/test_slices.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/core/reference/tests
copying nipy/core/reference/tests/test_coordinate_system.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/core/reference/tests
copying nipy/core/reference/tests/test_spaces.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/core/reference/tests
copying nipy/core/reference/tests/test_coordinate_map.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/core/reference/tests
copying nipy/core/reference/tests/test_matrix_groups.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/core/reference/tests
copying nipy/core/reference/tests/test_array_coords.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/core/reference/tests
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/fixes
copying nipy/fixes/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/fixes
copying nipy/fixes/setup.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/fixes
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/fixes/numpy
copying nipy/fixes/numpy/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/fixes/numpy
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/fixes/numpy/testing
copying nipy/fixes/numpy/testing/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/fixes/numpy/testing
copying nipy/fixes/numpy/testing/nosetester.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/fixes/numpy/testing
copying nipy/fixes/numpy/testing/noseclasses.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/fixes/numpy/testing
copying nipy/fixes/numpy/testing/utils.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/fixes/numpy/testing
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/fixes/nibabel
copying nipy/fixes/nibabel/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/fixes/nibabel
copying nipy/fixes/nibabel/orientations.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/fixes/nibabel
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/fixes/scipy
copying nipy/fixes/scipy/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/fixes/scipy
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/fixes/scipy/ndimage
copying nipy/fixes/scipy/ndimage/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/fixes/scipy/ndimage
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/io
copying nipy/io/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/io
copying nipy/io/nifti_ref.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/io
copying nipy/io/setup.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/io
copying nipy/io/files.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/io
copying nipy/io/api.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/io
copying nipy/io/nibcompat.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/io
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/io/tests
copying nipy/io/tests/test_nibcompat.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/io/tests
copying nipy/io/tests/test_nifti_ref.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/io/tests
copying nipy/io/tests/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/io/tests
copying nipy/io/tests/test_save.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/io/tests
copying nipy/io/tests/test_image_io.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/io/tests
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/io/imageformats
copying nipy/io/imageformats/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/io/imageformats
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/modalities
copying nipy/modalities/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/modalities
copying nipy/modalities/setup.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/modalities
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/modalities/fmri
copying nipy/modalities/fmri/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/modalities/fmri
copying nipy/modalities/fmri/hemodynamic_models.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/modalities/fmri
copying nipy/modalities/fmri/hrf.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/modalities/fmri
copying nipy/modalities/fmri/setup.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/modalities/fmri
copying nipy/modalities/fmri/utils.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/modalities/fmri
copying nipy/modalities/fmri/realfuncs.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/modalities/fmri
copying nipy/modalities/fmri/design_matrix.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/modalities/fmri
copying nipy/modalities/fmri/fmri.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/modalities/fmri
copying nipy/modalities/fmri/api.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/modalities/fmri
copying nipy/modalities/fmri/glm.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/modalities/fmri
copying nipy/modalities/fmri/design.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/modalities/fmri
copying nipy/modalities/fmri/experimental_paradigm.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/modalities/fmri
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/modalities/fmri/tests
copying nipy/modalities/fmri/tests/test_paradigm.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/modalities/fmri/tests
copying nipy/modalities/fmri/tests/test_hemodynamic_models.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/modalities/fmri/tests
copying nipy/modalities/fmri/tests/test_glm.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/modalities/fmri/tests
copying nipy/modalities/fmri/tests/test_dmtx.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/modalities/fmri/tests
copying nipy/modalities/fmri/tests/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/modalities/fmri/tests
copying nipy/modalities/fmri/tests/test_design.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/modalities/fmri/tests
copying nipy/modalities/fmri/tests/test_fmri.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/modalities/fmri/tests
copying nipy/modalities/fmri/tests/test_aliases.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/modalities/fmri/tests
copying nipy/modalities/fmri/tests/test_realfuncs.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/modalities/fmri/tests
copying nipy/modalities/fmri/tests/test_hrf.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/modalities/fmri/tests
copying nipy/modalities/fmri/tests/test_iterators.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/modalities/fmri/tests
copying nipy/modalities/fmri/tests/test_utils.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/modalities/fmri/tests
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/modalities/fmri/fmristat
copying nipy/modalities/fmri/fmristat/invert.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/modalities/fmri/fmristat
copying nipy/modalities/fmri/fmristat/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/modalities/fmri/fmristat
copying nipy/modalities/fmri/fmristat/hrf.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/modalities/fmri/fmristat
copying nipy/modalities/fmri/fmristat/setup.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/modalities/fmri/fmristat
copying nipy/modalities/fmri/fmristat/outputters.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/modalities/fmri/fmristat
copying nipy/modalities/fmri/fmristat/model.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/modalities/fmri/fmristat
copying nipy/modalities/fmri/fmristat/api.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/modalities/fmri/fmristat
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/modalities/fmri/fmristat/tests
copying nipy/modalities/fmri/fmristat/tests/test_iterables.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/modalities/fmri/fmristat/tests
copying nipy/modalities/fmri/fmristat/tests/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/modalities/fmri/fmristat/tests
copying nipy/modalities/fmri/fmristat/tests/test_outputters.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/modalities/fmri/fmristat/tests
copying nipy/modalities/fmri/fmristat/tests/test_FIAC.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/modalities/fmri/fmristat/tests
copying nipy/modalities/fmri/fmristat/tests/test_model.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/modalities/fmri/fmristat/tests
copying nipy/modalities/fmri/fmristat/tests/test_hrf.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/modalities/fmri/fmristat/tests
copying nipy/modalities/fmri/fmristat/tests/FIACdesigns.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/modalities/fmri/fmristat/tests
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/modalities/fmri/spm
copying nipy/modalities/fmri/spm/reml.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/modalities/fmri/spm
copying nipy/modalities/fmri/spm/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/modalities/fmri/spm
copying nipy/modalities/fmri/spm/correlation.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/modalities/fmri/spm
copying nipy/modalities/fmri/spm/model.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/modalities/fmri/spm
copying nipy/modalities/fmri/spm/trace.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/modalities/fmri/spm
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/utils
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copying nipy/utils/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/utils
copying nipy/utils/skip_test.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/utils
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copying nipy/utils/compat3.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/utils
copying nipy/utils/arrays.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/utils
copying nipy/utils/utilities.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/utils
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/utils/tests
copying nipy/utils/tests/test_arrays.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/utils/tests
copying nipy/utils/tests/test_compat3.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/utils/tests
copying nipy/utils/tests/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/utils/tests
copying nipy/utils/tests/test_skip_test.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/utils/tests
copying nipy/utils/tests/test_utilities.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/utils/tests
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/tests
copying nipy/tests/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/tests
copying nipy/tests/scriptrunner.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/tests
copying nipy/tests/test_scripts.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/tests
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/externals
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copying nipy/externals/validate.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/externals
copying nipy/externals/six.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/externals
copying nipy/externals/setup.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/externals
copying nipy/externals/configobj.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/externals
copying nipy/externals/argparse.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/externals
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/externals/transforms3d
copying nipy/externals/transforms3d/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/externals/transforms3d
copying nipy/externals/transforms3d/setup.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/externals/transforms3d
copying nipy/externals/transforms3d/taitbryan.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/externals/transforms3d
copying nipy/externals/transforms3d/quaternions.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/externals/transforms3d
copying nipy/externals/transforms3d/utils.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/externals/transforms3d
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/externals/transforms3d/tests
copying nipy/externals/transforms3d/tests/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/externals/transforms3d/tests
copying nipy/externals/transforms3d/tests/test_taitbryan.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/externals/transforms3d/tests
copying nipy/externals/transforms3d/tests/samples.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/externals/transforms3d/tests
copying nipy/externals/transforms3d/tests/test_quaternions.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/externals/transforms3d/tests
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/testing
copying nipy/testing/doctester.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/testing
copying nipy/testing/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/testing
copying nipy/testing/nosetester.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/testing
copying nipy/testing/setup.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/testing
copying nipy/testing/decorators.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/testing
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/testing/tests
copying nipy/testing/tests/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/testing/tests
copying nipy/testing/tests/test_doctester.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/testing/tests
copying nipy/testing/tests/test_images.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/testing/tests
copying nipy/testing/tests/test_doctesting.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/testing/tests
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/labs
copying nipy/labs/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/labs
copying nipy/labs/mask.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/labs
copying nipy/labs/setup.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/labs
copying nipy/labs/viz3d.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/labs
copying nipy/labs/statistical_mapping.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/labs
copying nipy/labs/viz.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/labs
copying build/src.linux-x86_64-3.8/nipy/labs/__config__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/labs
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/labs/bindings
copying nipy/labs/bindings/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/labs/bindings
copying nipy/labs/bindings/setup.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/labs/bindings
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/labs/bindings/tests
copying nipy/labs/bindings/tests/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/labs/bindings/tests
copying nipy/labs/bindings/tests/test_array.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/labs/bindings/tests
copying nipy/labs/bindings/tests/test_blas1.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/labs/bindings/tests
copying nipy/labs/bindings/tests/test_linalg.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/labs/bindings/tests
copying nipy/labs/bindings/tests/test_blas3.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/labs/bindings/tests
copying nipy/labs/bindings/tests/test_numpy.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/labs/bindings/tests
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/labs/bindings/benchmarks
copying nipy/labs/bindings/benchmarks/bench_numpy.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/labs/bindings/benchmarks
copying nipy/labs/bindings/benchmarks/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/labs/bindings/benchmarks
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/labs/glm
copying nipy/labs/glm/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/labs/glm
copying nipy/labs/glm/setup.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/labs/glm
copying nipy/labs/glm/glm.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/labs/glm
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/labs/glm/tests
copying nipy/labs/glm/tests/test_glm.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/labs/glm/tests
copying nipy/labs/glm/tests/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/labs/glm/tests
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/labs/glm/benchmarks
copying nipy/labs/glm/benchmarks/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/labs/glm/benchmarks
copying nipy/labs/glm/benchmarks/bench_glm.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/labs/glm/benchmarks
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/labs/group
copying nipy/labs/group/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/labs/group
copying nipy/labs/group/permutation_test.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/labs/group
copying nipy/labs/group/setup.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/labs/group
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/labs/group/tests
copying nipy/labs/group/tests/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/labs/group/tests
copying nipy/labs/group/tests/test_permutation_test.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/labs/group/tests
copying nipy/labs/group/tests/test_onesample_stat.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/labs/group/tests
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/labs/spatial_models
copying nipy/labs/spatial_models/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/labs/spatial_models
copying nipy/labs/spatial_models/parcellation.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/labs/spatial_models
copying nipy/labs/spatial_models/mroi.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/labs/spatial_models
copying nipy/labs/spatial_models/discrete_domain.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/labs/spatial_models
copying nipy/labs/spatial_models/hierarchical_parcellation.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/labs/spatial_models
copying nipy/labs/spatial_models/setup.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/labs/spatial_models
copying nipy/labs/spatial_models/structural_bfls.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/labs/spatial_models
copying nipy/labs/spatial_models/hroi.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/labs/spatial_models
copying nipy/labs/spatial_models/bayesian_structural_analysis.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/labs/spatial_models
copying nipy/labs/spatial_models/parcel_io.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/labs/spatial_models
copying nipy/labs/spatial_models/bsa_io.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/labs/spatial_models
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/labs/spatial_models/tests
copying nipy/labs/spatial_models/tests/test_parcel.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/labs/spatial_models/tests
copying nipy/labs/spatial_models/tests/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/labs/spatial_models/tests
copying nipy/labs/spatial_models/tests/test_hroi.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/labs/spatial_models/tests
copying nipy/labs/spatial_models/tests/test_mroi.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/labs/spatial_models/tests
copying nipy/labs/spatial_models/tests/test_bsa_io.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/labs/spatial_models/tests
copying nipy/labs/spatial_models/tests/test_discrete_domain.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/labs/spatial_models/tests
copying nipy/labs/spatial_models/tests/test_parcel_io.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/labs/spatial_models/tests
copying nipy/labs/spatial_models/tests/test_bsa.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/labs/spatial_models/tests
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/labs/utils
copying nipy/labs/utils/reproducibility_measures.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/labs/utils
copying nipy/labs/utils/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/labs/utils
copying nipy/labs/utils/mask.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/labs/utils
copying nipy/labs/utils/setup.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/labs/utils
copying nipy/labs/utils/simul_multisubject_fmri_dataset.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/labs/utils
copying nipy/labs/utils/zscore.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/labs/utils
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/labs/utils/tests
copying nipy/labs/utils/tests/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/labs/utils/tests
copying nipy/labs/utils/tests/test_repro.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/labs/utils/tests
copying nipy/labs/utils/tests/test_misc.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/labs/utils/tests
copying nipy/labs/utils/tests/test_simul_multisubject_fmri_dataset.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/labs/utils/tests
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/labs/viz_tools
copying nipy/labs/viz_tools/cm.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/labs/viz_tools
copying nipy/labs/viz_tools/slicers.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/labs/viz_tools
copying nipy/labs/viz_tools/activation_maps.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/labs/viz_tools
copying nipy/labs/viz_tools/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/labs/viz_tools
copying nipy/labs/viz_tools/setup.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/labs/viz_tools
copying nipy/labs/viz_tools/maps_3d.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/labs/viz_tools
copying nipy/labs/viz_tools/coord_tools.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/labs/viz_tools
copying nipy/labs/viz_tools/edge_detect.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/labs/viz_tools
copying nipy/labs/viz_tools/anat_cache.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/labs/viz_tools
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/labs/viz_tools/test
copying nipy/labs/viz_tools/test/test_edge_detect.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/labs/viz_tools/test
copying nipy/labs/viz_tools/test/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/labs/viz_tools/test
copying nipy/labs/viz_tools/test/test_cm.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/labs/viz_tools/test
copying nipy/labs/viz_tools/test/test_activation_maps.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/labs/viz_tools/test
copying nipy/labs/viz_tools/test/test_slicers.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/labs/viz_tools/test
copying nipy/labs/viz_tools/test/test_coord_tools.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/labs/viz_tools/test
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/labs/datasets
copying nipy/labs/datasets/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/labs/datasets
copying nipy/labs/datasets/setup.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/labs/datasets
copying nipy/labs/datasets/converters.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/labs/datasets
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/labs/datasets/volumes
copying nipy/labs/datasets/volumes/volume_data.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/labs/datasets/volumes
copying nipy/labs/datasets/volumes/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/labs/datasets/volumes
copying nipy/labs/datasets/volumes/volume_field.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/labs/datasets/volumes
copying nipy/labs/datasets/volumes/volume_img.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/labs/datasets/volumes
copying nipy/labs/datasets/volumes/setup.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/labs/datasets/volumes
copying nipy/labs/datasets/volumes/volume_grid.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/labs/datasets/volumes
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/labs/datasets/volumes/tests
copying nipy/labs/datasets/volumes/tests/test_volume_data.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/labs/datasets/volumes/tests
copying nipy/labs/datasets/volumes/tests/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/labs/datasets/volumes/tests
copying nipy/labs/datasets/volumes/tests/test_volume_grid.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/labs/datasets/volumes/tests
copying nipy/labs/datasets/volumes/tests/test_volume_field.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/labs/datasets/volumes/tests
copying nipy/labs/datasets/volumes/tests/test_volume_img.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/labs/datasets/volumes/tests
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/labs/datasets/transforms
copying nipy/labs/datasets/transforms/transform.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/labs/datasets/transforms
copying nipy/labs/datasets/transforms/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/labs/datasets/transforms
copying nipy/labs/datasets/transforms/affine_utils.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/labs/datasets/transforms
copying nipy/labs/datasets/transforms/setup.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/labs/datasets/transforms
copying nipy/labs/datasets/transforms/affine_transform.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/labs/datasets/transforms
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/labs/datasets/transforms/tests
copying nipy/labs/datasets/transforms/tests/test_affine_transform.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/labs/datasets/transforms/tests
copying nipy/labs/datasets/transforms/tests/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/labs/datasets/transforms/tests
copying nipy/labs/datasets/transforms/tests/test_transform.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/labs/datasets/transforms/tests
copying nipy/labs/datasets/transforms/tests/test_affine_utils.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/labs/datasets/transforms/tests
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/labs/datasets/tests
copying nipy/labs/datasets/tests/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/labs/datasets/tests
copying nipy/labs/datasets/tests/test_converters.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/labs/datasets/tests
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/labs/tests
copying nipy/labs/tests/test_mask.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/labs/tests
copying nipy/labs/tests/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/labs/tests
copying nipy/labs/tests/test_statistical_mapping.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/labs/tests
running build_clib
customize UnixCCompiler
customize UnixCCompiler using build_clib
building 'cstat' library
compiling C sources
C compiler: x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -g -Og -Wall -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/build/nipy-0.4.3~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC
creating build/temp.linux-x86_64-3.8-pydebug
creating build/temp.linux-x86_64-3.8-pydebug/build
creating build/temp.linux-x86_64-3.8-pydebug/build/nipy-0.4.3~rc1
creating build/temp.linux-x86_64-3.8-pydebug/build/nipy-0.4.3~rc1/lib
creating build/temp.linux-x86_64-3.8-pydebug/build/nipy-0.4.3~rc1/lib/fff
creating build/temp.linux-x86_64-3.8-pydebug/build/nipy-0.4.3~rc1/lib/fff_python_wrapper
creating build/temp.linux-x86_64-3.8-pydebug/build/nipy-0.4.3~rc1/lib/lapack_lite
compile options: '-I/usr/lib/python3/dist-packages/numpy/core/include -Inipy/algorithms/registration -Inipy/algorithms/slicetiming -Inipy/algorithms/segmentation -Inipy/algorithms/statistics -I/build/nipy-0.4.3~rc1/lib/fff -I/build/nipy-0.4.3~rc1/lib/fff_python_wrapper -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.8d -c'
x86_64-linux-gnu-gcc: /build/nipy-0.4.3~rc1/lib/fff/fff_array.c
x86_64-linux-gnu-gcc: /build/nipy-0.4.3~rc1/lib/fff/fff_base.c
x86_64-linux-gnu-gcc: /build/nipy-0.4.3~rc1/lib/fff/fff_gen_stats.c
x86_64-linux-gnu-gcc: /build/nipy-0.4.3~rc1/lib/fff/fff_blas.c
x86_64-linux-gnu-gcc: /build/nipy-0.4.3~rc1/lib/fff/fff_glm_kalman.c
x86_64-linux-gnu-gcc: /build/nipy-0.4.3~rc1/lib/fff/fff_glm_twolevel.c
x86_64-linux-gnu-gcc: /build/nipy-0.4.3~rc1/lib/fff/fff_matrix.c
x86_64-linux-gnu-gcc: /build/nipy-0.4.3~rc1/lib/fff/fff_lapack.c
x86_64-linux-gnu-gcc: /build/nipy-0.4.3~rc1/lib/fff/fff_onesample_stat.c
x86_64-linux-gnu-gcc: /build/nipy-0.4.3~rc1/lib/fff/fff_routines.c
x86_64-linux-gnu-gcc: /build/nipy-0.4.3~rc1/lib/fff/fff_specfun.c
x86_64-linux-gnu-gcc: /build/nipy-0.4.3~rc1/lib/fff/fff_twosample_stat.c
x86_64-linux-gnu-gcc: /build/nipy-0.4.3~rc1/lib/fff/fff_vector.c
/build/nipy-0.4.3~rc1/lib/fff/fff_lapack.c: In function 'fff_lapack_dgetrf':
/build/nipy-0.4.3~rc1/lib/fff/fff_lapack.c:59:20: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
59 | (ipiv->dimX != FFF_MIN(m,n)) ||
| ^~
/build/nipy-0.4.3~rc1/lib/fff/fff_lapack.c: In function 'fff_lapack_dgeqrf':
/build/nipy-0.4.3~rc1/lib/fff/fff_lapack.c:82:19: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
82 | if ( (tau->size != FFF_MIN(m,n)) ||
| ^~
/build/nipy-0.4.3~rc1/lib/fff/fff_lapack.c: In function 'fff_lapack_dgesdd':
/build/nipy-0.4.3~rc1/lib/fff/fff_lapack.c:136:17: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
136 | if ( U->size1 != m)
| ^~
/build/nipy-0.4.3~rc1/lib/fff/fff_lapack.c:138:18: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
138 | if ( Vt->size1 != n)
| ^~
/build/nipy-0.4.3~rc1/lib/fff/fff_lapack.c:140:19: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
140 | if ( Aux->size1 != dmax)
| ^~
/build/nipy-0.4.3~rc1/lib/fff/fff_lapack.c:142:17: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
142 | if ( (s->size != dmin) ||
| ^~
/build/nipy-0.4.3~rc1/lib/fff/fff_lapack.c:147:21: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
147 | (iwork->dimX != 8*dmin) ||
| ^~
x86_64-linux-gnu-gcc: /build/nipy-0.4.3~rc1/lib/fff_python_wrapper/fffpy.c
/build/nipy-0.4.3~rc1/lib/fff/fff_blas.c: In function 'fff_blas_ddot':
/build/nipy-0.4.3~rc1/lib/fff/fff_blas.c:97:10: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'const long unsigned int'} [-Wsign-compare]
97 | if ( n != y->size )
| ^~
/build/nipy-0.4.3~rc1/lib/fff/fff_blas.c: In function 'fff_blas_dswap':
/build/nipy-0.4.3~rc1/lib/fff/fff_blas.c:142:10: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
142 | if ( n != y->size )
| ^~
/build/nipy-0.4.3~rc1/lib/fff/fff_blas.c: In function 'fff_blas_dcopy':
/build/nipy-0.4.3~rc1/lib/fff/fff_blas.c:155:10: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
155 | if ( n != y->size )
| ^~
/build/nipy-0.4.3~rc1/lib/fff/fff_blas.c: In function 'fff_blas_daxpy':
/build/nipy-0.4.3~rc1/lib/fff/fff_blas.c:168:10: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
168 | if ( n != y->size )
| ^~
/build/nipy-0.4.3~rc1/lib/fff/fff_blas.c: In function 'fff_blas_drot':
/build/nipy-0.4.3~rc1/lib/fff/fff_blas.c:202:10: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
202 | if ( n != y->size )
| ^~
/build/nipy-0.4.3~rc1/lib/fff/fff_blas.c: In function 'fff_blas_drotm':
/build/nipy-0.4.3~rc1/lib/fff/fff_blas.c:224:10: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
224 | if ( n != y->size )
| ^~
x86_64-linux-gnu-gcc: /build/nipy-0.4.3~rc1/lib/lapack_lite/blas_lite.c
x86_64-linux-gnu-gcc: /build/nipy-0.4.3~rc1/lib/lapack_lite/dlamch.c
/build/nipy-0.4.3~rc1/lib/fff/fff_matrix.c: In function 'fff_matrix_transpose':
/build/nipy-0.4.3~rc1/lib/fff/fff_matrix.c:264:20: warning: variable 'rB' set but not used [-Wunused-but-set-variable]
264 | size_t i, j, rA, rB;
| ^~
x86_64-linux-gnu-gcc: /build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c
x86_64-linux-gnu-gcc: /build/nipy-0.4.3~rc1/lib/lapack_lite/f2c_lite.c
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlamch.c: In function 'dlamc4_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlamch.c:720:13: warning: variable 'i__1' set but not used [-Wunused-but-set-variable]
720 | integer i__1;
| ^~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlamch.c: In function 'dlamc5_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlamch.c:834:13: warning: variable 'i__1' set but not used [-Wunused-but-set-variable]
834 | integer i__1;
| ^~~~
In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
from /build/nipy-0.4.3~rc1/lib/fff_python_wrapper/fffpy.h:2,
from /build/nipy-0.4.3~rc1/lib/fff_python_wrapper/fffpy.c:1:
/usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
/build/nipy-0.4.3~rc1/lib/fff_python_wrapper/fffpy.c: In function 'fffpy_import_array':
/build/nipy-0.4.3~rc1/lib/fff_python_wrapper/fffpy.c:17:3: warning: returning 'void *' from a function with return type 'IMP_OUT' {aka 'int'} makes integer from pointer without a cast [-Wint-conversion]
17 | import_array();
| ^~~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/fff_python_wrapper/fffpy.c: In function '_fff_vector_new_from_buffer':
/build/nipy-0.4.3~rc1/lib/fff_python_wrapper/fffpy.c:68:40: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
68 | if ((type == NPY_DOUBLE) && (itemsize==sizeof_double)) {
| ^~
/build/nipy-0.4.3~rc1/lib/fff_python_wrapper/fffpy.c: In function 'fffpy_multi_iterator_delete':
/build/nipy-0.4.3~rc1/lib/fff_python_wrapper/fffpy.c:591:13: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare]
591 | for(i=0; i<thisone->narr; i++)
| ^
/build/nipy-0.4.3~rc1/lib/fff_python_wrapper/fffpy.c: In function 'fffpy_multi_iterator_update':
/build/nipy-0.4.3~rc1/lib/fff_python_wrapper/fffpy.c:603:13: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare]
603 | for(i=0; i<thisone->narr; i++)
| ^
/build/nipy-0.4.3~rc1/lib/fff_python_wrapper/fffpy.c: In function 'fffpy_multi_iterator_reset':
/build/nipy-0.4.3~rc1/lib/fff_python_wrapper/fffpy.c:614:13: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare]
614 | for(i=0; i<thisone->narr; i++)
| ^
/build/nipy-0.4.3~rc1/lib/fff_python_wrapper/fffpy.c: In function 'fffpy_import_array':
/build/nipy-0.4.3~rc1/lib/fff_python_wrapper/fffpy.c:18:1: warning: control reaches end of non-void function [-Wreturn-type]
18 | }
| ^
/build/nipy-0.4.3~rc1/lib/lapack_lite/blas_lite.c: In function 'dgemm_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/blas_lite.c:607:57: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
607 | if (*m == 0 || *n == 0 || (*alpha == 0. || *k == 0) && *beta == 1.) {
| ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/blas_lite.c:419:31: warning: variable 'ncola' set but not used [-Wunused-but-set-variable]
419 | static integer i__, j, l, ncola;
| ^~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/blas_lite.c: In function 'dgemv_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/blas_lite.c:909:44: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
909 | if (*m == 0 || *n == 0 || *alpha == 0. && *beta == 1.) {
| ~~~~~~~~~~~~~^~~~~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/blas_lite.c: In function 'drotmg_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/blas_lite.c:1655:18: warning: variable 'igo_fmt' set but not used [-Wunused-but-set-variable]
1655 | static char *igo_fmt;
| ^~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/blas_lite.c: In function 'dsymm_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/blas_lite.c:2266:44: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
2266 | if (*m == 0 || *n == 0 || *alpha == 0. && *beta == 1.) {
| ~~~~~~~~~~~~~^~~~~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/blas_lite.c: In function 'dsymv_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/blas_lite.c:2548:33: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
2548 | if (*n == 0 || *alpha == 0. && *beta == 1.) {
| ~~~~~~~~~~~~~^~~~~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/blas_lite.c: In function 'dsyr2k_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/blas_lite.c:3363:46: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
3363 | if (*n == 0 || (*alpha == 0. || *k == 0) && *beta == 1.) {
| ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/blas_lite.c: In function 'dsyrk_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/blas_lite.c:3719:46: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
3719 | if (*n == 0 || (*alpha == 0. || *k == 0) && *beta == 1.) {
| ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/blas_lite.c: In function 'lsame_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/blas_lite.c:5588:18: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
5588 | if (inta >= 129 && inta <= 137 || inta >= 145 && inta <= 153 || inta
| ~~~~~~~~~~~~^~~~~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/blas_lite.c:5589:10: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
5588 | if (inta >= 129 && inta <= 137 || inta >= 145 && inta <= 153 || inta
| ~~~~
5589 | >= 162 && inta <= 169) {
| ~~~~~~~^~~~~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/blas_lite.c:5592:18: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
5592 | if (intb >= 129 && intb <= 137 || intb >= 145 && intb <= 153 || intb
| ~~~~~~~~~~~~^~~~~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/blas_lite.c:5593:10: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
5592 | if (intb >= 129 && intb <= 137 || intb >= 145 && intb <= 153 || intb
| ~~~~
5593 | >= 162 && intb <= 169) {
| ~~~~~~~^~~~~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c: In function 'dbdsdc_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:274:40: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
274 | } else if (*ldu < 1 || icompq == 2 && *ldu < *n) {
| ~~~~~~~~~~~~^~~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:276:41: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
276 | } else if (*ldvt < 1 || icompq == 2 && *ldvt < *n) {
| ~~~~~~~~~~~~^~~~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c: In function 'dbdsqr_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:768:27: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
768 | } else if (*ncvt == 0 && *ldvt < 1 || *ncvt > 0 && *ldvt < max(1,*n)) {
| ~~~~~~~~~~~^~~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:772:26: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
772 | } else if (*ncc == 0 && *ldc < 1 || *ncc > 0 && *ldc < max(1,*n)) {
| ~~~~~~~~~~^~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:1031:22: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
1031 | d__1)) || tol < 0. && (d__3 = e[m - 1], abs(d__3)) <= thresh)
| ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:1067:17: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
1067 | ) || tol < 0. && (d__3 = e[ll], abs(d__3)) <= thresh) {
| ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c: In function 'dgeev_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:2840:36: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
2840 | } else if (*ldvl < 1 || wantvl && *ldvl < *n) {
| ~~~~~~~^~~~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:2842:36: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
2842 | } else if (*ldvr < 1 || wantvr && *ldvr < *n) {
| ~~~~~~~^~~~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c: In function 'dgesdd_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:5337:35: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
5337 | } else if (*ldu < 1 || wntqas && *ldu < *m || wntqo && *m < *n && *ldu < *
| ~~~~~~~^~~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:5337:68: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
5337 | } else if (*ldu < 1 || wntqas && *ldu < *m || wntqo && *m < *n && *ldu < *
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~
5338 | m) {
| ~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:5340:35: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
5340 | } else if (*ldvt < 1 || wntqa && *ldvt < *n || wntqs && *ldvt < minmn ||
| ~~~~~~^~~~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:5340:58: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
5340 | } else if (*ldvt < 1 || wntqa && *ldvt < *n || wntqs && *ldvt < minmn ||
| ~~~~~~^~~~~~~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:5341:24: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
5341 | wntqo && *m >= *n && *ldvt < *n) {
| ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c: In function 'dhseqr_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:7768:34: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
7768 | } else if (*ldz < 1 || wantz && *ldz < max(1,*n)) {
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c: In function 'dlaexc_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:13223:8: warning: suggest parentheses around '+' inside '<<' [-Wparentheses]
13223 | (*n1 + 1 << 2) - 5], &c__4, &d__[(*n1 + 1 << 2) - 4], &c__4, &
| ~~~~^~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:13223:41: warning: suggest parentheses around '+' inside '<<' [-Wparentheses]
13223 | (*n1 + 1 << 2) - 5], &c__4, &d__[(*n1 + 1 << 2) - 4], &c__4, &
| ~~~~^~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c: In function 'dlaqr0_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:17755:45: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
17755 | if (ld == 0 || ld * 100 <= nw * nibble && kbot - ktop + 1 > min(
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c: In function 'dlaqr4_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:20024:45: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
20024 | if (ld == 0 || ld * 100 <= nw * nibble && kbot - ktop + 1 > min(
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c: In function 'dlaqr5_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:20637:45: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
20637 | h__[k + 3 + (k + 1) * h_dim1] == 0. && h__[k + 3
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
20638 | + (k + 2) * h_dim1] == 0.)) {
| ~~~~~~~~~~~~~~~~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c: In function 'dlascl_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:23732:37: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
23732 | } else if (*n < 0 || itype == 4 && *n != *m || itype == 5 && *n != *m) {
| ~~~~~~~~~~~^~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:23732:63: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
23732 | } else if (*n < 0 || itype == 4 && *n != *m || itype == 5 && *n != *m) {
| ~~~~~~~~~~~^~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:23744:69: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
23744 | if (*ku < 0 || *ku > max(i__1,0) || (itype == 4 || itype == 5) &&
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~
23745 | *kl != *ku) {
| ~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:23747:28: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
23747 | } else if (itype == 4 && *lda < *kl + 1 || itype == 5 && *lda < *
| ~~~~~~~~~~~^~~~~~~~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:23748:28: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
23748 | ku + 1 || itype == 6 && *lda < (*kl << 1) + *ku + 1) {
| ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c: In function 'dlasdq_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:28444:27: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
28444 | } else if (*ncvt == 0 && *ldvt < 1 || *ncvt > 0 && *ldvt < max(1,*n)) {
| ~~~~~~~~~~~^~~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:28448:26: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
28448 | } else if (*ncc == 0 && *ldc < 1 || *ncc > 0 && *ldc < max(1,*n)) {
| ~~~~~~~~~~^~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c: In function 'dlasq2_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:29218:15: warning: suggest parentheses around '-' inside '<<' [-Wparentheses]
29218 | i__1 = *n - 1 << 1;
| ~~~^~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:29297:12: warning: suggest parentheses around '+' inside '<<' [-Wparentheses]
29297 | ipn4 = i0 + n0 << 2;
| ~~~^~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:29298:17: warning: suggest parentheses around '-' inside '<<' [-Wparentheses]
29298 | i__1 = i0 + n0 - 1 << 1;
| ~~~~~~~~^~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:29318:16: warning: suggest parentheses around '-' inside '<<' [-Wparentheses]
29318 | for (i4 = (n0 - 1 << 2) + pp; i4 >= i__1; i4 += -4) {
| ~~~^~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:29332:13: warning: suggest parentheses around '-' inside '<<' [-Wparentheses]
29332 | i__1 = (n0 - 1 << 2) + pp;
| ~~~^~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:29386:15: warning: suggest parentheses around '-' inside '<<' [-Wparentheses]
29386 | ndiv = n0 - i0 << 1;
| ~~~^~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:29490:17: warning: suggest parentheses around '-' inside '<<' [-Wparentheses]
29490 | i__3 = n0 - 3 << 2;
| ~~~^~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c: In function 'dlasq5_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:29661:17: warning: suggest parentheses around '-' inside '<<' [-Wparentheses]
29661 | i__1 = *n0 - 3 << 2;
| ~~~~^~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:29674:17: warning: suggest parentheses around '-' inside '<<' [-Wparentheses]
29674 | i__1 = *n0 - 3 << 2;
| ~~~~^~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:29692:12: warning: suggest parentheses around '-' inside '<<' [-Wparentheses]
29692 | j4 = (*n0 - 2 << 2) - *pp;
| ~~~~^~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:29712:17: warning: suggest parentheses around '-' inside '<<' [-Wparentheses]
29712 | i__1 = *n0 - 3 << 2;
| ~~~~^~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:29728:17: warning: suggest parentheses around '-' inside '<<' [-Wparentheses]
29728 | i__1 = *n0 - 3 << 2;
| ~~~~^~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:29749:12: warning: suggest parentheses around '-' inside '<<' [-Wparentheses]
29749 | j4 = (*n0 - 2 << 2) - *pp;
| ~~~~^~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c: In function 'dlasq6_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:29863:13: warning: suggest parentheses around '-' inside '<<' [-Wparentheses]
29863 | i__1 = *n0 - 3 << 2;
| ~~~~^~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:29887:13: warning: suggest parentheses around '-' inside '<<' [-Wparentheses]
29887 | i__1 = *n0 - 3 << 2;
| ~~~~^~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:29916:15: warning: suggest parentheses around '-' inside '<<' [-Wparentheses]
29916 | j4 = (*n0 - 2 << 2) - *pp;
| ~~~~^~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c: In function 'dlazq3_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:32091:17: warning: suggest parentheses around '+' inside '<<' [-Wparentheses]
32091 | ipn4 = *i0 + *n0 << 2;
| ~~~~^~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:32092:23: warning: suggest parentheses around '-' inside '<<' [-Wparentheses]
32092 | i__1 = *i0 + *n0 - 1 << 1;
| ~~~~~~~~~~^~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:32159:53: warning: suggest parentheses around '-' inside '<<' [-Wparentheses]
32159 | } else if (*dmin__ < 0. && *dmin1 > 0. && z__[(*n0 - 1 << 2) - *pp] <
| ~~~~^~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:32164:15: warning: suggest parentheses around '-' inside '<<' [-Wparentheses]
32164 | z__[(*n0 - 1 << 2) - *pp + 2] = 0.;
| ~~~~^~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c: In function 'dorgbr_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:32887:32: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
32887 | } else if (*n < 0 || wantq && (*n > *m || *n < min(*m,*k)) || ! wantq && (
| ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:32887:75: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
32887 | } else if (*n < 0 || wantq && (*n > *m || *n < min(*m,*k)) || ! wantq && (
| ~~~~~~~~^~~~
32888 | *m > *n || *m < min(*n,*k))) {
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c: In function 'dorm2l_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:34048:14: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
34048 | if (left && notran || ! left && ! notran) {
| ~~~~~^~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c: In function 'dorm2r_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:34249:14: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
34249 | if (left && ! notran || ! left && notran) {
| ~~~~~^~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c: In function 'dormbr_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:34489:13: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
34489 | if (applyq && *lda < max(1,nq) || ! applyq && *lda < max(i__1,i__2)) {
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c: In function 'dorml2_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:34786:14: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
34786 | if (left && notran || ! left && ! notran) {
| ~~~~~^~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c: In function 'dormlq_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:35078:11: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
35078 | if (left && notran || ! left && ! notran) {
| ~~~~~^~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c: In function 'dormql_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:35391:11: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
35391 | if (left && notran || ! left && ! notran) {
| ~~~~~^~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c: In function 'dormqr_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:35689:11: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
35689 | if (left && ! notran || ! left && notran) {
| ~~~~~^~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c: In function 'dstedc_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:36623:39: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
36623 | } else if (*ldz < 1 || icompz > 0 && *ldz < max(1,*n)) {
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:36638:17: warning: suggest parentheses around '-' inside '<<' [-Wparentheses]
36638 | lwmin = *n - 1 << 1;
| ~~~^~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c: In function 'dsteqr_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:37043:39: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
37043 | } else if (*ldz < 1 || icompz > 0 && *ldz < max(1,*n)) {
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c: In function 'dtrevc_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:39115:35: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
39115 | } else if (*ldvl < 1 || leftv && *ldvl < *n) {
| ~~~~~~^~~~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:39117:36: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
39117 | } else if (*ldvr < 1 || rightv && *ldvr < *n) {
| ~~~~~~~^~~~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c: In function 'dtrexc_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:40230:34: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
40230 | } else if (*ldq < 1 || wantq && *ldq < max(1,*n)) {
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c: In function 'ilaenv_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:40822:16: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
40822 | if (ic >= 129 && ic <= 137 || ic >= 145 && ic <= 153 || ic >= 162 &&
| ~~~~~~~~~~^~~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:40822:68: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
40822 | if (ic >= 129 && ic <= 137 || ic >= 145 && ic <= 153 || ic >= 162 &&
| ~~~~~~~~~~^~
40823 | ic <= 169) {
| ~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:40827:17: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
40827 | if (ic >= 129 && ic <= 137 || ic >= 145 && ic <= 153 || ic >=
| ~~~~~~~~~~^~~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:40828:8: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
40827 | if (ic >= 129 && ic <= 137 || ic >= 145 && ic <= 153 || ic >=
| ~~~~~
40828 | 162 && ic <= 169) {
| ~~~~^~~~~~~~~~~~
x86_64-linux-gnu-gcc-ar: adding 18 object files to build/temp.linux-x86_64-3.8-pydebug/libcstat.a
running build_ext
customize UnixCCompiler
customize UnixCCompiler using MyBuildExt
building 'nipy.algorithms.registration._registration' extension
compiling C sources
C compiler: x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -g -Og -Wall -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/build/nipy-0.4.3~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC
creating build/temp.linux-x86_64-3.8-pydebug/build/src.linux-x86_64-3.8
creating build/temp.linux-x86_64-3.8-pydebug/build/src.linux-x86_64-3.8/nipy
creating build/temp.linux-x86_64-3.8-pydebug/build/src.linux-x86_64-3.8/nipy/algorithms
creating build/temp.linux-x86_64-3.8-pydebug/build/src.linux-x86_64-3.8/nipy/algorithms/registration
creating build/temp.linux-x86_64-3.8-pydebug/nipy
creating build/temp.linux-x86_64-3.8-pydebug/nipy/algorithms
creating build/temp.linux-x86_64-3.8-pydebug/nipy/algorithms/registration
compile options: '-I/usr/lib/python3/dist-packages/numpy/core/include -Inipy/algorithms/registration -Inipy/algorithms/slicetiming -Inipy/algorithms/segmentation -Inipy/algorithms/statistics -I/build/nipy-0.4.3~rc1/lib/fff -I/build/nipy-0.4.3~rc1/lib/fff_python_wrapper -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.8d -c'
x86_64-linux-gnu-gcc: build/src.linux-x86_64-3.8/nipy/algorithms/registration/_registration.c
x86_64-linux-gnu-gcc: nipy/algorithms/registration/wichmann_prng.c
x86_64-linux-gnu-gcc: nipy/algorithms/registration/cubic_spline.c
x86_64-linux-gnu-gcc: nipy/algorithms/registration/polyaffine.c
x86_64-linux-gnu-gcc: nipy/algorithms/registration/joint_histogram.c
In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
from nipy/algorithms/registration/polyaffine.h:16,
from nipy/algorithms/registration/polyaffine.c:1:
/usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
from nipy/algorithms/registration/joint_histogram.h:27,
from nipy/algorithms/registration/joint_histogram.c:1:
/usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
nipy/algorithms/registration/joint_histogram.c: In function 'L1_moments':
nipy/algorithms/registration/joint_histogram.c:358:14: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
358 | for (i=0; i<size; i++, buf+=offset)
| ^
nipy/algorithms/registration/joint_histogram.c:398:13: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
398 | if (med < size) {
| ^
nipy/algorithms/registration/joint_histogram.c:400:20: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
400 | for (i=med; i<size; i ++, buf += offset)
| ^
In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
from nipy/algorithms/registration/cubic_spline.h:35,
from nipy/algorithms/registration/cubic_spline.c:1:
/usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
nipy/algorithms/registration/cubic_spline.c: In function '_cubic_spline_transform1d':
nipy/algorithms/registration/cubic_spline.c:107:14: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
107 | for (k=1; k<dim; k++) {
| ^
nipy/algorithms/registration/cubic_spline.c:114:14: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
114 | for (k=2; k<dim; k++) {
| ^
nipy/algorithms/registration/cubic_spline.c:131:14: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
131 | for (k=1; k<dim; k++) {
| ^
nipy/algorithms/registration/cubic_spline.c:144:14: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
144 | for (k=1; k<dim; k++) {
| ^
nipy/algorithms/registration/cubic_spline.c: In function 'cubic_spline_transform':
nipy/algorithms/registration/cubic_spline.c:205:19: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare]
205 | for(axis=0; axis<res->nd; axis++) {
| ^
nipy/algorithms/registration/cubic_spline.c:215:19: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare]
215 | for(axis=0; axis<res->nd; axis++)
| ^
nipy/algorithms/registration/cubic_spline.c: In function '_mirrored_position':
nipy/algorithms/registration/cubic_spline.c:634:14: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
634 | else if (x > ddim)
| ^
nipy/algorithms/registration/cubic_spline.c: In function '_mirror_grid_neighbors':
nipy/algorithms/registration/cubic_spline.c:690:23: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
690 | if ((*px>=3) && (*px<=3*ddim)) {
| ^~
nipy/algorithms/registration/cubic_spline.c: In function '_neighbors_zero_outside':
nipy/algorithms/registration/cubic_spline.c:717:14: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
717 | if (*px>dim) { /* ddim<=x<dim, px=dim+1 */
| ^
In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
from build/src.linux-x86_64-3.8/nipy/algorithms/registration/_registration.c:611:
/usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -g -O2 -fdebug-prefix-map=/build/nipy-0.4.3~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.8-pydebug/build/src.linux-x86_64-3.8/nipy/algorithms/registration/_registration.o build/temp.linux-x86_64-3.8-pydebug/nipy/algorithms/registration/joint_histogram.o build/temp.linux-x86_64-3.8-pydebug/nipy/algorithms/registration/wichmann_prng.o build/temp.linux-x86_64-3.8-pydebug/nipy/algorithms/registration/cubic_spline.o build/temp.linux-x86_64-3.8-pydebug/nipy/algorithms/registration/polyaffine.o -Lbuild/temp.linux-x86_64-3.8-pydebug -o /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/registration/_registration.cpython-38d-x86_64-linux-gnu.so
building 'nipy.algorithms.segmentation._segmentation' extension
compiling C sources
C compiler: x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -g -Og -Wall -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/build/nipy-0.4.3~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC
creating build/temp.linux-x86_64-3.8-pydebug/build/src.linux-x86_64-3.8/nipy/algorithms/segmentation
creating build/temp.linux-x86_64-3.8-pydebug/nipy/algorithms/segmentation
compile options: '-I/usr/lib/python3/dist-packages/numpy/core/include -Inipy/algorithms/registration -Inipy/algorithms/slicetiming -Inipy/algorithms/segmentation -Inipy/algorithms/statistics -I/build/nipy-0.4.3~rc1/lib/fff -I/build/nipy-0.4.3~rc1/lib/fff_python_wrapper -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.8d -c'
x86_64-linux-gnu-gcc: build/src.linux-x86_64-3.8/nipy/algorithms/segmentation/_segmentation.c
x86_64-linux-gnu-gcc: nipy/algorithms/segmentation/mrf.c
In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
from nipy/algorithms/segmentation/mrf.h:16,
from nipy/algorithms/segmentation/mrf.c:1:
/usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
from build/src.linux-x86_64-3.8/nipy/algorithms/segmentation/_segmentation.c:611:
/usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -g -O2 -fdebug-prefix-map=/build/nipy-0.4.3~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.8-pydebug/build/src.linux-x86_64-3.8/nipy/algorithms/segmentation/_segmentation.o build/temp.linux-x86_64-3.8-pydebug/nipy/algorithms/segmentation/mrf.o -Lbuild/temp.linux-x86_64-3.8-pydebug -o /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/segmentation/_segmentation.cpython-38d-x86_64-linux-gnu.so
building 'nipy.algorithms.statistics.intvol' extension
compiling C sources
C compiler: x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -g -Og -Wall -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/build/nipy-0.4.3~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC
creating build/temp.linux-x86_64-3.8-pydebug/build/src.linux-x86_64-3.8/nipy/algorithms/statistics
compile options: '-I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/lib/python3/dist-packages/numpy/core/include -Inipy/algorithms/registration -Inipy/algorithms/slicetiming -Inipy/algorithms/segmentation -Inipy/algorithms/statistics -I/build/nipy-0.4.3~rc1/lib/fff -I/build/nipy-0.4.3~rc1/lib/fff_python_wrapper -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.8d -c'
x86_64-linux-gnu-gcc: build/src.linux-x86_64-3.8/nipy/algorithms/statistics/intvol.c
In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
from build/src.linux-x86_64-3.8/nipy/algorithms/statistics/intvol.c:610:
/usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -g -O2 -fdebug-prefix-map=/build/nipy-0.4.3~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.8-pydebug/build/src.linux-x86_64-3.8/nipy/algorithms/statistics/intvol.o -Lbuild/temp.linux-x86_64-3.8-pydebug -o /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/statistics/intvol.cpython-38d-x86_64-linux-gnu.so
building 'nipy.algorithms.statistics.histogram' extension
compiling C sources
C compiler: x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -g -Og -Wall -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/build/nipy-0.4.3~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC
compile options: '-I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/lib/python3/dist-packages/numpy/core/include -Inipy/algorithms/registration -Inipy/algorithms/slicetiming -Inipy/algorithms/segmentation -Inipy/algorithms/statistics -I/build/nipy-0.4.3~rc1/lib/fff -I/build/nipy-0.4.3~rc1/lib/fff_python_wrapper -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.8d -c'
x86_64-linux-gnu-gcc: build/src.linux-x86_64-3.8/nipy/algorithms/statistics/histogram.c
In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
from build/src.linux-x86_64-3.8/nipy/algorithms/statistics/histogram.c:610:
/usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -g -O2 -fdebug-prefix-map=/build/nipy-0.4.3~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.8-pydebug/build/src.linux-x86_64-3.8/nipy/algorithms/statistics/histogram.o -Lbuild/temp.linux-x86_64-3.8-pydebug -o /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/statistics/histogram.cpython-38d-x86_64-linux-gnu.so
building 'nipy.algorithms.statistics._quantile' extension
compiling C sources
C compiler: x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -g -Og -Wall -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/build/nipy-0.4.3~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC
creating build/temp.linux-x86_64-3.8-pydebug/nipy/algorithms/statistics
compile options: '-I/usr/lib/python3/dist-packages/numpy/core/include -Inipy/algorithms/registration -Inipy/algorithms/slicetiming -Inipy/algorithms/segmentation -Inipy/algorithms/statistics -I/build/nipy-0.4.3~rc1/lib/fff -I/build/nipy-0.4.3~rc1/lib/fff_python_wrapper -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.8d -c'
x86_64-linux-gnu-gcc: build/src.linux-x86_64-3.8/nipy/algorithms/statistics/_quantile.c
x86_64-linux-gnu-gcc: nipy/algorithms/statistics/quantile.c
In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
from nipy/algorithms/statistics/quantile.h:9,
from nipy/algorithms/statistics/quantile.c:1:
/usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:21,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
from nipy/algorithms/statistics/quantile.h:9,
from nipy/algorithms/statistics/quantile.c:1:
/usr/lib/python3/dist-packages/numpy/core/include/numpy/__multiarray_api.h:1463:1: warning: '_import_array' defined but not used [-Wunused-function]
1463 | _import_array(void)
| ^~~~~~~~~~~~~
In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
from build/src.linux-x86_64-3.8/nipy/algorithms/statistics/_quantile.c:610:
/usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -g -O2 -fdebug-prefix-map=/build/nipy-0.4.3~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.8-pydebug/build/src.linux-x86_64-3.8/nipy/algorithms/statistics/_quantile.o build/temp.linux-x86_64-3.8-pydebug/nipy/algorithms/statistics/quantile.o -Lbuild/temp.linux-x86_64-3.8-pydebug -o /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/statistics/_quantile.cpython-38d-x86_64-linux-gnu.so
building 'nipy.algorithms.graph._graph' extension
compiling C sources
C compiler: x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -g -Og -Wall -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/build/nipy-0.4.3~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC
creating build/temp.linux-x86_64-3.8-pydebug/nipy/algorithms/graph
compile options: '-I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/lib/python3/dist-packages/numpy/core/include -Inipy/algorithms/registration -Inipy/algorithms/slicetiming -Inipy/algorithms/segmentation -Inipy/algorithms/statistics -I/build/nipy-0.4.3~rc1/lib/fff -I/build/nipy-0.4.3~rc1/lib/fff_python_wrapper -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.8d -c'
x86_64-linux-gnu-gcc: nipy/algorithms/graph/_graph.c
In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
from nipy/algorithms/graph/_graph.c:256:
/usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:21,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
from nipy/algorithms/graph/_graph.c:256:
/usr/lib/python3/dist-packages/numpy/core/include/numpy/__multiarray_api.h:1463:1: warning: '_import_array' defined but not used [-Wunused-function]
1463 | _import_array(void)
| ^~~~~~~~~~~~~
x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -g -O2 -fdebug-prefix-map=/build/nipy-0.4.3~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.8-pydebug/nipy/algorithms/graph/_graph.o -Lbuild/temp.linux-x86_64-3.8-pydebug -o /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/algorithms/graph/_graph.cpython-38d-x86_64-linux-gnu.so
building 'nipy.labs.bindings.linalg' extension
compiling C sources
C compiler: x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -g -Og -Wall -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/build/nipy-0.4.3~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC
creating build/temp.linux-x86_64-3.8-pydebug/build/src.linux-x86_64-3.8/nipy/labs
creating build/temp.linux-x86_64-3.8-pydebug/build/src.linux-x86_64-3.8/nipy/labs/bindings
compile options: '-I/usr/lib/python3/dist-packages/numpy/core/include -Inipy/algorithms/registration -Inipy/algorithms/slicetiming -Inipy/algorithms/segmentation -Inipy/algorithms/statistics -I/build/nipy-0.4.3~rc1/lib/fff -I/build/nipy-0.4.3~rc1/lib/fff_python_wrapper -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.8d -c'
x86_64-linux-gnu-gcc: build/src.linux-x86_64-3.8/nipy/labs/bindings/linalg.c
In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
from build/src.linux-x86_64-3.8/nipy/labs/bindings/linalg.c:610:
/usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -g -O2 -fdebug-prefix-map=/build/nipy-0.4.3~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.8-pydebug/build/src.linux-x86_64-3.8/nipy/labs/bindings/linalg.o -Lbuild/temp.linux-x86_64-3.8-pydebug -lcstat -o /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/labs/bindings/linalg.cpython-38d-x86_64-linux-gnu.so
building 'nipy.labs.bindings.array' extension
compiling C sources
C compiler: x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -g -Og -Wall -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/build/nipy-0.4.3~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC
compile options: '-I/usr/lib/python3/dist-packages/numpy/core/include -Inipy/algorithms/registration -Inipy/algorithms/slicetiming -Inipy/algorithms/segmentation -Inipy/algorithms/statistics -I/build/nipy-0.4.3~rc1/lib/fff -I/build/nipy-0.4.3~rc1/lib/fff_python_wrapper -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.8d -c'
x86_64-linux-gnu-gcc: build/src.linux-x86_64-3.8/nipy/labs/bindings/array.c
In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
from build/src.linux-x86_64-3.8/nipy/labs/bindings/array.c:610:
/usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -g -O2 -fdebug-prefix-map=/build/nipy-0.4.3~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.8-pydebug/build/src.linux-x86_64-3.8/nipy/labs/bindings/array.o -Lbuild/temp.linux-x86_64-3.8-pydebug -lcstat -o /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/labs/bindings/array.cpython-38d-x86_64-linux-gnu.so
building 'nipy.labs.bindings.wrapper' extension
compiling C sources
C compiler: x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -g -Og -Wall -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/build/nipy-0.4.3~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC
compile options: '-I/usr/lib/python3/dist-packages/numpy/core/include -Inipy/algorithms/registration -Inipy/algorithms/slicetiming -Inipy/algorithms/segmentation -Inipy/algorithms/statistics -I/build/nipy-0.4.3~rc1/lib/fff -I/build/nipy-0.4.3~rc1/lib/fff_python_wrapper -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.8d -c'
x86_64-linux-gnu-gcc: build/src.linux-x86_64-3.8/nipy/labs/bindings/wrapper.c
In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
from build/src.linux-x86_64-3.8/nipy/labs/bindings/wrapper.c:610:
/usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
build/src.linux-x86_64-3.8/nipy/labs/bindings/wrapper.c: In function '__pyx_pf_4nipy_4labs_8bindings_7wrapper_12pass_vector_via_iterator':
build/src.linux-x86_64-3.8/nipy/labs/bindings/wrapper.c:2950:40: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
2950 | __pyx_t_4 = ((__pyx_v_multi->index < __pyx_v_niters) != 0);
| ^
x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -g -O2 -fdebug-prefix-map=/build/nipy-0.4.3~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.8-pydebug/build/src.linux-x86_64-3.8/nipy/labs/bindings/wrapper.o -Lbuild/temp.linux-x86_64-3.8-pydebug -lcstat -o /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/labs/bindings/wrapper.cpython-38d-x86_64-linux-gnu.so
building 'nipy.labs.glm.kalman' extension
compiling C sources
C compiler: x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -g -Og -Wall -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/build/nipy-0.4.3~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC
creating build/temp.linux-x86_64-3.8-pydebug/build/src.linux-x86_64-3.8/nipy/labs/glm
compile options: '-I/usr/lib/python3/dist-packages/numpy/core/include -Inipy/algorithms/registration -Inipy/algorithms/slicetiming -Inipy/algorithms/segmentation -Inipy/algorithms/statistics -I/build/nipy-0.4.3~rc1/lib/fff -I/build/nipy-0.4.3~rc1/lib/fff_python_wrapper -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.8d -c'
x86_64-linux-gnu-gcc: build/src.linux-x86_64-3.8/nipy/labs/glm/kalman.c
In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
from build/src.linux-x86_64-3.8/nipy/labs/glm/kalman.c:610:
/usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -g -O2 -fdebug-prefix-map=/build/nipy-0.4.3~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.8-pydebug/build/src.linux-x86_64-3.8/nipy/labs/glm/kalman.o -Lbuild/temp.linux-x86_64-3.8-pydebug -lcstat -o /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/labs/glm/kalman.cpython-38d-x86_64-linux-gnu.so
building 'nipy.labs.group.onesample' extension
compiling C sources
C compiler: x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -g -Og -Wall -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/build/nipy-0.4.3~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC
creating build/temp.linux-x86_64-3.8-pydebug/build/src.linux-x86_64-3.8/nipy/labs/group
compile options: '-I/usr/lib/python3/dist-packages/numpy/core/include -Inipy/algorithms/registration -Inipy/algorithms/slicetiming -Inipy/algorithms/segmentation -Inipy/algorithms/statistics -I/build/nipy-0.4.3~rc1/lib/fff -I/build/nipy-0.4.3~rc1/lib/fff_python_wrapper -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.8d -c'
x86_64-linux-gnu-gcc: build/src.linux-x86_64-3.8/nipy/labs/group/onesample.c
In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
from build/src.linux-x86_64-3.8/nipy/labs/group/onesample.c:610:
/usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -g -O2 -fdebug-prefix-map=/build/nipy-0.4.3~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.8-pydebug/build/src.linux-x86_64-3.8/nipy/labs/group/onesample.o -Lbuild/temp.linux-x86_64-3.8-pydebug -lcstat -o /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/labs/group/onesample.cpython-38d-x86_64-linux-gnu.so
building 'nipy.labs.group.twosample' extension
compiling C sources
C compiler: x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -g -Og -Wall -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/build/nipy-0.4.3~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC
compile options: '-I/usr/lib/python3/dist-packages/numpy/core/include -Inipy/algorithms/registration -Inipy/algorithms/slicetiming -Inipy/algorithms/segmentation -Inipy/algorithms/statistics -I/build/nipy-0.4.3~rc1/lib/fff -I/build/nipy-0.4.3~rc1/lib/fff_python_wrapper -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.8d -c'
x86_64-linux-gnu-gcc: build/src.linux-x86_64-3.8/nipy/labs/group/twosample.c
In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
from build/src.linux-x86_64-3.8/nipy/labs/group/twosample.c:610:
/usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -g -O2 -fdebug-prefix-map=/build/nipy-0.4.3~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.8-pydebug/build/src.linux-x86_64-3.8/nipy/labs/group/twosample.o -Lbuild/temp.linux-x86_64-3.8-pydebug -lcstat -o /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/labs/group/twosample.cpython-38d-x86_64-linux-gnu.so
building 'nipy.labs.group.glm_twolevel' extension
compiling C sources
C compiler: x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -g -Og -Wall -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/build/nipy-0.4.3~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC
compile options: '-I/usr/lib/python3/dist-packages/numpy/core/include -Inipy/algorithms/registration -Inipy/algorithms/slicetiming -Inipy/algorithms/segmentation -Inipy/algorithms/statistics -I/build/nipy-0.4.3~rc1/lib/fff -I/build/nipy-0.4.3~rc1/lib/fff_python_wrapper -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.8d -c'
x86_64-linux-gnu-gcc: build/src.linux-x86_64-3.8/nipy/labs/group/glm_twolevel.c
In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
from build/src.linux-x86_64-3.8/nipy/labs/group/glm_twolevel.c:610:
/usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -g -O2 -fdebug-prefix-map=/build/nipy-0.4.3~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.8-pydebug/build/src.linux-x86_64-3.8/nipy/labs/group/glm_twolevel.o -Lbuild/temp.linux-x86_64-3.8-pydebug -lcstat -o /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/labs/group/glm_twolevel.cpython-38d-x86_64-linux-gnu.so
building 'nipy.labs.utils.routines' extension
compiling C sources
C compiler: x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -g -Og -Wall -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/build/nipy-0.4.3~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC
creating build/temp.linux-x86_64-3.8-pydebug/build/src.linux-x86_64-3.8/nipy/labs/utils
compile options: '-I/usr/lib/python3/dist-packages/numpy/core/include -Inipy/algorithms/registration -Inipy/algorithms/slicetiming -Inipy/algorithms/segmentation -Inipy/algorithms/statistics -I/build/nipy-0.4.3~rc1/lib/fff -I/build/nipy-0.4.3~rc1/lib/fff_python_wrapper -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.8d -c'
x86_64-linux-gnu-gcc: build/src.linux-x86_64-3.8/nipy/labs/utils/routines.c
In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
from build/src.linux-x86_64-3.8/nipy/labs/utils/routines.c:610:
/usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -g -O2 -fdebug-prefix-map=/build/nipy-0.4.3~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.8-pydebug/build/src.linux-x86_64-3.8/nipy/labs/utils/routines.o -Lbuild/temp.linux-x86_64-3.8-pydebug -lcstat -o /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/labs/utils/routines.cpython-38d-x86_64-linux-gnu.so
________________________________________________________________________________
Could not find datasource "nipy/templates" in data path "/usr/share/nipy:/usr/local/share/nipy:/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/.nipy"; Is it possible you have not installed a data package?
You may need the package "nipy-templates"
You can download and install the package from:
http://nipy.org/data-packages/nipy-templates-0.2.tar.gz
Check the instructions in the ``doc/users/install_data.rst`` file in the nipy
source tree, or online at http://nipy.org/nipy/users/install_data.html
If you have the package, have you set the path to the package correctly?
________________________________________________________________________________
Could not find datasource "nipy/data" in data path "/usr/share/nipy:/usr/local/share/nipy:/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/.nipy"; Is it possible you have not installed a data package?
You may need the package "nipy-data"
You can download and install the package from:
http://nipy.org/data-packages/nipy-data-0.2.tar.gz
Check the instructions in the ``doc/users/install_data.rst`` file in the nipy
source tree, or online at http://nipy.org/nipy/users/install_data.html
If you have the package, have you set the path to the package correctly?
running build_scripts
/build/nipy-0.4.3~rc1/setup_helpers.py:51: ResourceWarning: unclosed file <_io.TextIOWrapper name='nipy/info.py' mode='rt' encoding='UTF-8'>
exec(open(_info_fname, 'rt').read(), {}, INFO_VARS)
ResourceWarning: Enable tracemalloc to get the object allocation traceback
/usr/lib/python3/dist-packages/numpy/distutils/system_info.py:1914: UserWarning:
Optimized (vendor) Blas libraries are not found.
Falls back to netlib Blas library which has worse performance.
A better performance should be easily gained by switching
Blas library.
if self._calc_info(blas):
/build/nipy-0.4.3~rc1/setup_helpers.py:371: ResourceWarning: unclosed file <_io.TextIOWrapper name='/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_dbg_nipy/build/nipy/COMMIT_INFO.txt' mode='wt' encoding='UTF-8'>
cfg_parser.write(open(out_pth, 'wt'))
ResourceWarning: Enable tracemalloc to get the object allocation traceback
I: pybuild base:232: /usr/bin/python3-dbg setup.py build
/build/nipy-0.4.3~rc1/setup_helpers.py:51: ResourceWarning: unclosed file <_io.TextIOWrapper name='nipy/info.py' mode='rt' encoding='UTF-8'>
exec(open(_info_fname, 'rt').read(), {}, INFO_VARS)
ResourceWarning: Enable tracemalloc to get the object allocation traceback
lapack_opt_info:
lapack_mkl_info:
customize UnixCCompiler
libraries mkl_rt not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
openblas_lapack_info:
libraries openblas not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
openblas_clapack_info:
libraries openblas,lapack not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
flame_info:
libraries flame not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
atlas_3_10_threads_info:
Setting PTATLAS=ATLAS
libraries lapack_atlas not found in /usr/local/lib
libraries tatlas,tatlas not found in /usr/local/lib
libraries lapack_atlas not found in /usr/lib
libraries tatlas,tatlas not found in /usr/lib
libraries lapack_atlas not found in /usr/lib/x86_64-linux-gnu
libraries tatlas,tatlas not found in /usr/lib/x86_64-linux-gnu
<class 'numpy.distutils.system_info.atlas_3_10_threads_info'>
NOT AVAILABLE
atlas_3_10_info:
libraries lapack_atlas not found in /usr/local/lib
libraries satlas,satlas not found in /usr/local/lib
libraries lapack_atlas not found in /usr/lib
libraries satlas,satlas not found in /usr/lib
libraries lapack_atlas not found in /usr/lib/x86_64-linux-gnu
libraries satlas,satlas not found in /usr/lib/x86_64-linux-gnu
<class 'numpy.distutils.system_info.atlas_3_10_info'>
NOT AVAILABLE
atlas_threads_info:
Setting PTATLAS=ATLAS
libraries lapack_atlas not found in /usr/local/lib
libraries ptf77blas,ptcblas,atlas not found in /usr/local/lib
libraries lapack_atlas not found in /usr/lib
libraries ptf77blas,ptcblas,atlas not found in /usr/lib
libraries lapack_atlas not found in /usr/lib/x86_64-linux-gnu
libraries ptf77blas,ptcblas,atlas not found in /usr/lib/x86_64-linux-gnu
<class 'numpy.distutils.system_info.atlas_threads_info'>
NOT AVAILABLE
atlas_info:
libraries lapack_atlas not found in /usr/local/lib
libraries f77blas,cblas,atlas not found in /usr/local/lib
libraries lapack_atlas not found in /usr/lib
libraries f77blas,cblas,atlas not found in /usr/lib
libraries lapack_atlas not found in /usr/lib/x86_64-linux-gnu
libraries f77blas,cblas,atlas not found in /usr/lib/x86_64-linux-gnu
<class 'numpy.distutils.system_info.atlas_info'>
NOT AVAILABLE
accelerate_info:
NOT AVAILABLE
lapack_info:
FOUND:
libraries = ['lapack', 'lapack']
library_dirs = ['/usr/lib/x86_64-linux-gnu']
language = f77
blas_opt_info:
blas_mkl_info:
libraries mkl_rt not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
blis_info:
libraries blis not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
openblas_info:
libraries openblas not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
atlas_3_10_blas_threads_info:
Setting PTATLAS=ATLAS
libraries tatlas not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
atlas_3_10_blas_info:
libraries satlas not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
atlas_blas_threads_info:
Setting PTATLAS=ATLAS
libraries ptf77blas,ptcblas,atlas not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
atlas_blas_info:
libraries f77blas,cblas,atlas not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
/usr/lib/python3/dist-packages/numpy/distutils/system_info.py:1914: UserWarning:
Optimized (vendor) Blas libraries are not found.
Falls back to netlib Blas library which has worse performance.
A better performance should be easily gained by switching
Blas library.
if self._calc_info(blas):
blas_info:
C compiler: x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -g -Og -Wall -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/build/nipy-0.4.3~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC
creating /tmp/tmp5358x4ty/tmp
creating /tmp/tmp5358x4ty/tmp/tmp5358x4ty
compile options: '-I/usr/local/include -I/usr/include -c'
x86_64-linux-gnu-gcc: /tmp/tmp5358x4ty/source.c
x86_64-linux-gnu-gcc -pthread /tmp/tmp5358x4ty/tmp/tmp5358x4ty/source.o -lblas -o /tmp/tmp5358x4ty/a.out
FOUND:
libraries = ['blas', 'blas']
library_dirs = ['/usr/lib/x86_64-linux-gnu']
include_dirs = ['/usr/local/include', '/usr/include']
language = c
define_macros = [('HAVE_CBLAS', None)]
FOUND:
define_macros = [('NO_ATLAS_INFO', 1), ('HAVE_CBLAS', None)]
libraries = ['blas', 'blas']
library_dirs = ['/usr/lib/x86_64-linux-gnu']
include_dirs = ['/usr/local/include', '/usr/include']
language = c
FOUND:
libraries = ['lapack', 'lapack', 'blas', 'blas']
library_dirs = ['/usr/lib/x86_64-linux-gnu']
language = c
define_macros = [('NO_ATLAS_INFO', 1), ('HAVE_CBLAS', None)]
include_dirs = ['/usr/local/include', '/usr/include']
Building with (slow) Lapack lite distribution: set NIPY_EXTERNAL_LAPACK environment variable or use setup.cfg to enable link to optimized BLAS / LAPACK
LAPACK build options:
library_dirs: []
libraries: []
lapack_info: {'libraries': ['lapack', 'lapack', 'blas', 'blas'], 'library_dirs': ['/usr/lib/x86_64-linux-gnu'], 'language': 'c', 'define_macros': [('NO_ATLAS_INFO', 1), ('HAVE_CBLAS', None)], 'include_dirs': ['/usr/local/include', '/usr/include']}
running build
running config_cc
unifing config_cc, config, build_clib, build_ext, build commands --compiler options
running config_fc
unifing config_fc, config, build_clib, build_ext, build commands --fcompiler options
running build_src
build_src
building py_modules sources
building library "cstat" sources
building extension "nipy.algorithms.registration._registration" sources
building extension "nipy.algorithms.segmentation._segmentation" sources
building extension "nipy.algorithms.statistics.intvol" sources
building extension "nipy.algorithms.statistics.histogram" sources
building extension "nipy.algorithms.statistics._quantile" sources
building extension "nipy.algorithms.graph._graph" sources
building extension "nipy.labs.bindings.linalg" sources
building extension "nipy.labs.bindings.array" sources
building extension "nipy.labs.bindings.wrapper" sources
building extension "nipy.labs.glm.kalman" sources
building extension "nipy.labs.group.onesample" sources
building extension "nipy.labs.group.twosample" sources
building extension "nipy.labs.group.glm_twolevel" sources
building extension "nipy.labs.utils.routines" sources
building data_files sources
build_src: building npy-pkg config files
running build_py
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy
copying nipy/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy
copying nipy/setup.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy
copying nipy/info.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy
copying nipy/pkg_info.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy
copying build/src.linux-x86_64-3.9/nipy/__config__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms
copying nipy/algorithms/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms
copying nipy/algorithms/optimize.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms
copying nipy/algorithms/setup.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms
copying nipy/algorithms/resample.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms
copying nipy/algorithms/kernel_smooth.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms
copying nipy/algorithms/fwhm.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms
copying nipy/algorithms/interpolation.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/tests
copying nipy/algorithms/tests/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/tests
copying nipy/algorithms/tests/test_resample.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/tests
copying nipy/algorithms/tests/test_kernel_smooth.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/tests
copying nipy/algorithms/tests/test_interpolator.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/tests
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/registration
copying nipy/algorithms/registration/polyaffine.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/registration
copying nipy/algorithms/registration/similarity_measures.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/registration
copying nipy/algorithms/registration/transform.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/registration
copying nipy/algorithms/registration/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/registration
copying nipy/algorithms/registration/type_check.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/registration
copying nipy/algorithms/registration/setup.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/registration
copying nipy/algorithms/registration/chain_transform.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/registration
copying nipy/algorithms/registration/resample.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/registration
copying nipy/algorithms/registration/optimizer.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/registration
copying nipy/algorithms/registration/histogram_registration.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/registration
copying nipy/algorithms/registration/groupwise_registration.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/registration
copying nipy/algorithms/registration/affine.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/registration
copying nipy/algorithms/registration/scripting.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/registration
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/registration/tests
copying nipy/algorithms/registration/tests/test_scripting.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/registration/tests
copying nipy/algorithms/registration/tests/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/registration/tests
copying nipy/algorithms/registration/tests/test_cubic_spline.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/registration/tests
copying nipy/algorithms/registration/tests/test_affine.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/registration/tests
copying nipy/algorithms/registration/tests/test_resample.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/registration/tests
copying nipy/algorithms/registration/tests/test_histogram_registration.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/registration/tests
copying nipy/algorithms/registration/tests/test_register.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/registration/tests
copying nipy/algorithms/registration/tests/test_fmri_realign4d.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/registration/tests
copying nipy/algorithms/registration/tests/test_transform.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/registration/tests
copying nipy/algorithms/registration/tests/test_chain_transforms.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/registration/tests
copying nipy/algorithms/registration/tests/test_slice_timing.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/registration/tests
copying nipy/algorithms/registration/tests/test_polyaffine.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/registration/tests
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/slicetiming
copying nipy/algorithms/slicetiming/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/slicetiming
copying nipy/algorithms/slicetiming/setup.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/slicetiming
copying nipy/algorithms/slicetiming/timefuncs.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/slicetiming
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/slicetiming/tests
copying nipy/algorithms/slicetiming/tests/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/slicetiming/tests
copying nipy/algorithms/slicetiming/tests/test_timefuncs.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/slicetiming/tests
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/segmentation
copying nipy/algorithms/segmentation/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/segmentation
copying nipy/algorithms/segmentation/brain_segmentation.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/segmentation
copying nipy/algorithms/segmentation/setup.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/segmentation
copying nipy/algorithms/segmentation/segmentation.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/segmentation
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/segmentation/tests
copying nipy/algorithms/segmentation/tests/test_segmentation.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/segmentation/tests
copying nipy/algorithms/segmentation/tests/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/segmentation/tests
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/statistics
copying nipy/algorithms/statistics/bayesian_mixed_effects.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/statistics
copying nipy/algorithms/statistics/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/statistics
copying nipy/algorithms/statistics/setup.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/statistics
copying nipy/algorithms/statistics/empirical_pvalue.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/statistics
copying nipy/algorithms/statistics/utils.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/statistics
copying nipy/algorithms/statistics/onesample.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/statistics
copying nipy/algorithms/statistics/api.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/statistics
copying nipy/algorithms/statistics/rft.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/statistics
copying nipy/algorithms/statistics/mixed_effects_stat.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/statistics
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/statistics/models
copying nipy/algorithms/statistics/models/setupscons.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/statistics/models
copying nipy/algorithms/statistics/models/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/statistics/models
copying nipy/algorithms/statistics/models/nlsmodel.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/statistics/models
copying nipy/algorithms/statistics/models/setup.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/statistics/models
copying nipy/algorithms/statistics/models/info.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/statistics/models
copying nipy/algorithms/statistics/models/utils.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/statistics/models
copying nipy/algorithms/statistics/models/model.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/statistics/models
copying nipy/algorithms/statistics/models/regression.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/statistics/models
copying nipy/algorithms/statistics/models/glm.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/statistics/models
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/statistics/models/family
copying nipy/algorithms/statistics/models/family/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/statistics/models/family
copying nipy/algorithms/statistics/models/family/varfuncs.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/statistics/models/family
copying nipy/algorithms/statistics/models/family/links.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/statistics/models/family
copying nipy/algorithms/statistics/models/family/family.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/statistics/models/family
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/statistics/models/tests
copying nipy/algorithms/statistics/models/tests/test_anova.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/statistics/models/tests
copying nipy/algorithms/statistics/models/tests/test_glm.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/statistics/models/tests
copying nipy/algorithms/statistics/models/tests/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/statistics/models/tests
copying nipy/algorithms/statistics/models/tests/test_regression.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/statistics/models/tests
copying nipy/algorithms/statistics/models/tests/test_ar.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/statistics/models/tests
copying nipy/algorithms/statistics/models/tests/test_model.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/statistics/models/tests
copying nipy/algorithms/statistics/models/tests/exampledata.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/statistics/models/tests
copying nipy/algorithms/statistics/models/tests/test_olsR.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/statistics/models/tests
copying nipy/algorithms/statistics/models/tests/test_estimable.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/statistics/models/tests
copying nipy/algorithms/statistics/models/tests/test_utils.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/statistics/models/tests
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/statistics/formula
copying nipy/algorithms/statistics/formula/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/statistics/formula
copying nipy/algorithms/statistics/formula/setup.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/statistics/formula
copying nipy/algorithms/statistics/formula/formulae.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/statistics/formula
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/statistics/formula/tests
copying nipy/algorithms/statistics/formula/tests/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/statistics/formula/tests
copying nipy/algorithms/statistics/formula/tests/test_formula.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/statistics/formula/tests
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/statistics/bench
copying nipy/algorithms/statistics/bench/bench_intvol.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/statistics/bench
copying nipy/algorithms/statistics/bench/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/statistics/bench
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/statistics/tests
copying nipy/algorithms/statistics/tests/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/statistics/tests
copying nipy/algorithms/statistics/tests/test_mixed_effects.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/statistics/tests
copying nipy/algorithms/statistics/tests/test_rft.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/statistics/tests
copying nipy/algorithms/statistics/tests/test_intrinsic_volumes.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/statistics/tests
copying nipy/algorithms/statistics/tests/test_onesample.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/statistics/tests
copying nipy/algorithms/statistics/tests/test_quantile.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/statistics/tests
copying nipy/algorithms/statistics/tests/test_empirical_pvalue.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/statistics/tests
copying nipy/algorithms/statistics/tests/test_utils.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/statistics/tests
copying nipy/algorithms/statistics/tests/test_histogram.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/statistics/tests
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/diagnostics
copying nipy/algorithms/diagnostics/tsdiffplot.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/diagnostics
copying nipy/algorithms/diagnostics/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/diagnostics
copying nipy/algorithms/diagnostics/commands.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/diagnostics
copying nipy/algorithms/diagnostics/timediff.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/diagnostics
copying nipy/algorithms/diagnostics/setup.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/diagnostics
copying nipy/algorithms/diagnostics/screens.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/diagnostics
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/diagnostics/tests
copying nipy/algorithms/diagnostics/tests/test_time_difference.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/diagnostics/tests
copying nipy/algorithms/diagnostics/tests/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/diagnostics/tests
copying nipy/algorithms/diagnostics/tests/test_screen.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/diagnostics/tests
copying nipy/algorithms/diagnostics/tests/test_commands.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/diagnostics/tests
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/clustering
copying nipy/algorithms/clustering/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/clustering
copying nipy/algorithms/clustering/bgmm.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/clustering
copying nipy/algorithms/clustering/gmm.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/clustering
copying nipy/algorithms/clustering/von_mises_fisher_mixture.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/clustering
copying nipy/algorithms/clustering/setup.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/clustering
copying nipy/algorithms/clustering/ggmixture.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/clustering
copying nipy/algorithms/clustering/hierarchical_clustering.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/clustering
copying nipy/algorithms/clustering/utils.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/clustering
copying nipy/algorithms/clustering/imm.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/clustering
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/clustering/tests
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copying nipy/algorithms/clustering/tests/test_ggm.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/clustering/tests
copying nipy/algorithms/clustering/tests/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/clustering/tests
copying nipy/algorithms/clustering/tests/test_gmm.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/clustering/tests
copying nipy/algorithms/clustering/tests/test_bgmm.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/clustering/tests
copying nipy/algorithms/clustering/tests/test_imm.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/clustering/tests
copying nipy/algorithms/clustering/tests/test_hierarchical_clustering.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/clustering/tests
copying nipy/algorithms/clustering/tests/test_clustering.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/clustering/tests
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/utils
copying nipy/algorithms/utils/pca.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/utils
copying nipy/algorithms/utils/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/utils
copying nipy/algorithms/utils/setup.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/utils
copying nipy/algorithms/utils/fast_distance.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/utils
copying nipy/algorithms/utils/matrices.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/utils
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/utils/tests
copying nipy/algorithms/utils/tests/test_pca_image.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/utils/tests
copying nipy/algorithms/utils/tests/test_matrices.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/utils/tests
copying nipy/algorithms/utils/tests/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/utils/tests
copying nipy/algorithms/utils/tests/test_fast_distance.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/utils/tests
copying nipy/algorithms/utils/tests/test_pca.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/utils/tests
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/graph
copying nipy/algorithms/graph/field.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/graph
copying nipy/algorithms/graph/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/graph
copying nipy/algorithms/graph/setup.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/graph
copying nipy/algorithms/graph/bipartite_graph.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/graph
copying nipy/algorithms/graph/forest.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/graph
copying nipy/algorithms/graph/graph.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/graph
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/graph/tests
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copying nipy/algorithms/graph/tests/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/graph/tests
copying nipy/algorithms/graph/tests/test_forest.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/graph/tests
copying nipy/algorithms/graph/tests/test_graph.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/graph/tests
copying nipy/algorithms/graph/tests/test_bipartite_graph.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/graph/tests
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/group
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copying nipy/algorithms/group/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/group
copying nipy/algorithms/group/setup.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/group
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/group/tests
copying nipy/algorithms/group/tests/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/group/tests
copying nipy/algorithms/group/tests/test_parcel_analysis.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/group/tests
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/interfaces
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copying nipy/interfaces/setup.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/interfaces
copying nipy/interfaces/spm.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/interfaces
copying nipy/interfaces/matlab.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/interfaces
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/interfaces/tests
copying nipy/interfaces/tests/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/interfaces/tests
copying nipy/interfaces/tests/test_mlabtemp.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/interfaces/tests
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/core
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copying nipy/core/api.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/core
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/core/image
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copying nipy/core/image/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/core/image
copying nipy/core/image/roi.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/core/image
copying nipy/core/image/image_spaces.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/core/image
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copying nipy/core/image/image_list.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/core/image
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/core/image/tests
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copying nipy/core/image/tests/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/core/image/tests
copying nipy/core/image/tests/test_image.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/core/image/tests
copying nipy/core/image/tests/test_rollimg.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/core/image/tests
copying nipy/core/image/tests/test_image_spaces.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/core/image/tests
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/core/utils
copying nipy/core/utils/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/core/utils
copying nipy/core/utils/setup.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/core/utils
copying nipy/core/utils/generators.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/core/utils
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copying nipy/core/utils/tests/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/core/utils/tests
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copying nipy/core/reference/spaces.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/core/reference
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copying nipy/modalities/fmri/realfuncs.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/modalities/fmri
copying nipy/modalities/fmri/design_matrix.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/modalities/fmri
copying nipy/modalities/fmri/fmri.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/modalities/fmri
copying nipy/modalities/fmri/api.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/modalities/fmri
copying nipy/modalities/fmri/glm.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/modalities/fmri
copying nipy/modalities/fmri/design.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/modalities/fmri
copying nipy/modalities/fmri/experimental_paradigm.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/modalities/fmri
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/modalities/fmri/tests
copying nipy/modalities/fmri/tests/test_paradigm.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/modalities/fmri/tests
copying nipy/modalities/fmri/tests/test_hemodynamic_models.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/modalities/fmri/tests
copying nipy/modalities/fmri/tests/test_glm.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/modalities/fmri/tests
copying nipy/modalities/fmri/tests/test_dmtx.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/modalities/fmri/tests
copying nipy/modalities/fmri/tests/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/modalities/fmri/tests
copying nipy/modalities/fmri/tests/test_design.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/modalities/fmri/tests
copying nipy/modalities/fmri/tests/test_fmri.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/modalities/fmri/tests
copying nipy/modalities/fmri/tests/test_aliases.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/modalities/fmri/tests
copying nipy/modalities/fmri/tests/test_realfuncs.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/modalities/fmri/tests
copying nipy/modalities/fmri/tests/test_hrf.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/modalities/fmri/tests
copying nipy/modalities/fmri/tests/test_iterators.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/modalities/fmri/tests
copying nipy/modalities/fmri/tests/test_utils.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/modalities/fmri/tests
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/modalities/fmri/fmristat
copying nipy/modalities/fmri/fmristat/invert.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/modalities/fmri/fmristat
copying nipy/modalities/fmri/fmristat/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/modalities/fmri/fmristat
copying nipy/modalities/fmri/fmristat/hrf.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/modalities/fmri/fmristat
copying nipy/modalities/fmri/fmristat/setup.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/modalities/fmri/fmristat
copying nipy/modalities/fmri/fmristat/outputters.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/modalities/fmri/fmristat
copying nipy/modalities/fmri/fmristat/model.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/modalities/fmri/fmristat
copying nipy/modalities/fmri/fmristat/api.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/modalities/fmri/fmristat
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/modalities/fmri/fmristat/tests
copying nipy/modalities/fmri/fmristat/tests/test_iterables.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/modalities/fmri/fmristat/tests
copying nipy/modalities/fmri/fmristat/tests/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/modalities/fmri/fmristat/tests
copying nipy/modalities/fmri/fmristat/tests/test_outputters.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/modalities/fmri/fmristat/tests
copying nipy/modalities/fmri/fmristat/tests/test_FIAC.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/modalities/fmri/fmristat/tests
copying nipy/modalities/fmri/fmristat/tests/test_model.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/modalities/fmri/fmristat/tests
copying nipy/modalities/fmri/fmristat/tests/test_hrf.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/modalities/fmri/fmristat/tests
copying nipy/modalities/fmri/fmristat/tests/FIACdesigns.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/modalities/fmri/fmristat/tests
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/modalities/fmri/spm
copying nipy/modalities/fmri/spm/reml.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/modalities/fmri/spm
copying nipy/modalities/fmri/spm/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/modalities/fmri/spm
copying nipy/modalities/fmri/spm/correlation.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/modalities/fmri/spm
copying nipy/modalities/fmri/spm/model.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/modalities/fmri/spm
copying nipy/modalities/fmri/spm/trace.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/modalities/fmri/spm
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/utils
copying nipy/utils/perlpie.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/utils
copying nipy/utils/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/utils
copying nipy/utils/skip_test.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/utils
copying nipy/utils/setup.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/utils
copying nipy/utils/compat3.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/utils
copying nipy/utils/arrays.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/utils
copying nipy/utils/utilities.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/utils
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/utils/tests
copying nipy/utils/tests/test_arrays.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/utils/tests
copying nipy/utils/tests/test_compat3.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/utils/tests
copying nipy/utils/tests/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/utils/tests
copying nipy/utils/tests/test_skip_test.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/utils/tests
copying nipy/utils/tests/test_utilities.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/utils/tests
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/tests
copying nipy/tests/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/tests
copying nipy/tests/scriptrunner.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/tests
copying nipy/tests/test_scripts.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/tests
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/externals
copying nipy/externals/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/externals
copying nipy/externals/validate.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/externals
copying nipy/externals/six.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/externals
copying nipy/externals/setup.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/externals
copying nipy/externals/configobj.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/externals
copying nipy/externals/argparse.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/externals
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/externals/transforms3d
copying nipy/externals/transforms3d/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/externals/transforms3d
copying nipy/externals/transforms3d/setup.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/externals/transforms3d
copying nipy/externals/transforms3d/taitbryan.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/externals/transforms3d
copying nipy/externals/transforms3d/quaternions.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/externals/transforms3d
copying nipy/externals/transforms3d/utils.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/externals/transforms3d
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/externals/transforms3d/tests
copying nipy/externals/transforms3d/tests/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/externals/transforms3d/tests
copying nipy/externals/transforms3d/tests/test_taitbryan.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/externals/transforms3d/tests
copying nipy/externals/transforms3d/tests/samples.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/externals/transforms3d/tests
copying nipy/externals/transforms3d/tests/test_quaternions.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/externals/transforms3d/tests
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/testing
copying nipy/testing/doctester.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/testing
copying nipy/testing/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/testing
copying nipy/testing/nosetester.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/testing
copying nipy/testing/setup.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/testing
copying nipy/testing/decorators.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/testing
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/testing/tests
copying nipy/testing/tests/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/testing/tests
copying nipy/testing/tests/test_doctester.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/testing/tests
copying nipy/testing/tests/test_images.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/testing/tests
copying nipy/testing/tests/test_doctesting.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/testing/tests
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/labs
copying nipy/labs/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/labs
copying nipy/labs/mask.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/labs
copying nipy/labs/setup.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/labs
copying nipy/labs/viz3d.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/labs
copying nipy/labs/statistical_mapping.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/labs
copying nipy/labs/viz.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/labs
copying build/src.linux-x86_64-3.9/nipy/labs/__config__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/labs
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/labs/bindings
copying nipy/labs/bindings/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/labs/bindings
copying nipy/labs/bindings/setup.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/labs/bindings
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/labs/bindings/tests
copying nipy/labs/bindings/tests/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/labs/bindings/tests
copying nipy/labs/bindings/tests/test_array.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/labs/bindings/tests
copying nipy/labs/bindings/tests/test_blas1.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/labs/bindings/tests
copying nipy/labs/bindings/tests/test_linalg.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/labs/bindings/tests
copying nipy/labs/bindings/tests/test_blas3.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/labs/bindings/tests
copying nipy/labs/bindings/tests/test_numpy.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/labs/bindings/tests
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/labs/bindings/benchmarks
copying nipy/labs/bindings/benchmarks/bench_numpy.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/labs/bindings/benchmarks
copying nipy/labs/bindings/benchmarks/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/labs/bindings/benchmarks
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/labs/glm
copying nipy/labs/glm/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/labs/glm
copying nipy/labs/glm/setup.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/labs/glm
copying nipy/labs/glm/glm.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/labs/glm
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/labs/glm/tests
copying nipy/labs/glm/tests/test_glm.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/labs/glm/tests
copying nipy/labs/glm/tests/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/labs/glm/tests
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/labs/glm/benchmarks
copying nipy/labs/glm/benchmarks/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/labs/glm/benchmarks
copying nipy/labs/glm/benchmarks/bench_glm.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/labs/glm/benchmarks
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/labs/group
copying nipy/labs/group/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/labs/group
copying nipy/labs/group/permutation_test.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/labs/group
copying nipy/labs/group/setup.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/labs/group
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/labs/group/tests
copying nipy/labs/group/tests/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/labs/group/tests
copying nipy/labs/group/tests/test_permutation_test.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/labs/group/tests
copying nipy/labs/group/tests/test_onesample_stat.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/labs/group/tests
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/labs/spatial_models
copying nipy/labs/spatial_models/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/labs/spatial_models
copying nipy/labs/spatial_models/parcellation.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/labs/spatial_models
copying nipy/labs/spatial_models/mroi.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/labs/spatial_models
copying nipy/labs/spatial_models/discrete_domain.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/labs/spatial_models
copying nipy/labs/spatial_models/hierarchical_parcellation.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/labs/spatial_models
copying nipy/labs/spatial_models/setup.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/labs/spatial_models
copying nipy/labs/spatial_models/structural_bfls.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/labs/spatial_models
copying nipy/labs/spatial_models/hroi.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/labs/spatial_models
copying nipy/labs/spatial_models/bayesian_structural_analysis.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/labs/spatial_models
copying nipy/labs/spatial_models/parcel_io.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/labs/spatial_models
copying nipy/labs/spatial_models/bsa_io.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/labs/spatial_models
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/labs/spatial_models/tests
copying nipy/labs/spatial_models/tests/test_parcel.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/labs/spatial_models/tests
copying nipy/labs/spatial_models/tests/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/labs/spatial_models/tests
copying nipy/labs/spatial_models/tests/test_hroi.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/labs/spatial_models/tests
copying nipy/labs/spatial_models/tests/test_mroi.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/labs/spatial_models/tests
copying nipy/labs/spatial_models/tests/test_bsa_io.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/labs/spatial_models/tests
copying nipy/labs/spatial_models/tests/test_discrete_domain.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/labs/spatial_models/tests
copying nipy/labs/spatial_models/tests/test_parcel_io.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/labs/spatial_models/tests
copying nipy/labs/spatial_models/tests/test_bsa.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/labs/spatial_models/tests
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/labs/utils
copying nipy/labs/utils/reproducibility_measures.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/labs/utils
copying nipy/labs/utils/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/labs/utils
copying nipy/labs/utils/mask.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/labs/utils
copying nipy/labs/utils/setup.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/labs/utils
copying nipy/labs/utils/simul_multisubject_fmri_dataset.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/labs/utils
copying nipy/labs/utils/zscore.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/labs/utils
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/labs/utils/tests
copying nipy/labs/utils/tests/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/labs/utils/tests
copying nipy/labs/utils/tests/test_repro.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/labs/utils/tests
copying nipy/labs/utils/tests/test_misc.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/labs/utils/tests
copying nipy/labs/utils/tests/test_simul_multisubject_fmri_dataset.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/labs/utils/tests
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/labs/viz_tools
copying nipy/labs/viz_tools/cm.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/labs/viz_tools
copying nipy/labs/viz_tools/slicers.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/labs/viz_tools
copying nipy/labs/viz_tools/activation_maps.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/labs/viz_tools
copying nipy/labs/viz_tools/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/labs/viz_tools
copying nipy/labs/viz_tools/setup.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/labs/viz_tools
copying nipy/labs/viz_tools/maps_3d.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/labs/viz_tools
copying nipy/labs/viz_tools/coord_tools.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/labs/viz_tools
copying nipy/labs/viz_tools/edge_detect.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/labs/viz_tools
copying nipy/labs/viz_tools/anat_cache.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/labs/viz_tools
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/labs/viz_tools/test
copying nipy/labs/viz_tools/test/test_edge_detect.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/labs/viz_tools/test
copying nipy/labs/viz_tools/test/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/labs/viz_tools/test
copying nipy/labs/viz_tools/test/test_cm.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/labs/viz_tools/test
copying nipy/labs/viz_tools/test/test_activation_maps.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/labs/viz_tools/test
copying nipy/labs/viz_tools/test/test_slicers.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/labs/viz_tools/test
copying nipy/labs/viz_tools/test/test_coord_tools.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/labs/viz_tools/test
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/labs/datasets
copying nipy/labs/datasets/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/labs/datasets
copying nipy/labs/datasets/setup.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/labs/datasets
copying nipy/labs/datasets/converters.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/labs/datasets
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/labs/datasets/volumes
copying nipy/labs/datasets/volumes/volume_data.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/labs/datasets/volumes
copying nipy/labs/datasets/volumes/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/labs/datasets/volumes
copying nipy/labs/datasets/volumes/volume_field.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/labs/datasets/volumes
copying nipy/labs/datasets/volumes/volume_img.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/labs/datasets/volumes
copying nipy/labs/datasets/volumes/setup.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/labs/datasets/volumes
copying nipy/labs/datasets/volumes/volume_grid.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/labs/datasets/volumes
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/labs/datasets/volumes/tests
copying nipy/labs/datasets/volumes/tests/test_volume_data.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/labs/datasets/volumes/tests
copying nipy/labs/datasets/volumes/tests/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/labs/datasets/volumes/tests
copying nipy/labs/datasets/volumes/tests/test_volume_grid.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/labs/datasets/volumes/tests
copying nipy/labs/datasets/volumes/tests/test_volume_field.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/labs/datasets/volumes/tests
copying nipy/labs/datasets/volumes/tests/test_volume_img.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/labs/datasets/volumes/tests
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/labs/datasets/transforms
copying nipy/labs/datasets/transforms/transform.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/labs/datasets/transforms
copying nipy/labs/datasets/transforms/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/labs/datasets/transforms
copying nipy/labs/datasets/transforms/affine_utils.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/labs/datasets/transforms
copying nipy/labs/datasets/transforms/setup.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/labs/datasets/transforms
copying nipy/labs/datasets/transforms/affine_transform.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/labs/datasets/transforms
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/labs/datasets/transforms/tests
copying nipy/labs/datasets/transforms/tests/test_affine_transform.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/labs/datasets/transforms/tests
copying nipy/labs/datasets/transforms/tests/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/labs/datasets/transforms/tests
copying nipy/labs/datasets/transforms/tests/test_transform.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/labs/datasets/transforms/tests
copying nipy/labs/datasets/transforms/tests/test_affine_utils.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/labs/datasets/transforms/tests
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/labs/datasets/tests
copying nipy/labs/datasets/tests/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/labs/datasets/tests
copying nipy/labs/datasets/tests/test_converters.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/labs/datasets/tests
creating /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/labs/tests
copying nipy/labs/tests/test_mask.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/labs/tests
copying nipy/labs/tests/__init__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/labs/tests
copying nipy/labs/tests/test_statistical_mapping.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/labs/tests
/build/nipy-0.4.3~rc1/setup_helpers.py:371: ResourceWarning: unclosed file <_io.TextIOWrapper name='/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/COMMIT_INFO.txt' mode='wt' encoding='UTF-8'>
cfg_parser.write(open(out_pth, 'wt'))
ResourceWarning: Enable tracemalloc to get the object allocation traceback
running build_clib
customize UnixCCompiler
customize UnixCCompiler using build_clib
building 'cstat' library
compiling C sources
C compiler: x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -g -Og -Wall -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/build/nipy-0.4.3~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC
creating build/temp.linux-x86_64-3.9-pydebug
creating build/temp.linux-x86_64-3.9-pydebug/build
creating build/temp.linux-x86_64-3.9-pydebug/build/nipy-0.4.3~rc1
creating build/temp.linux-x86_64-3.9-pydebug/build/nipy-0.4.3~rc1/lib
creating build/temp.linux-x86_64-3.9-pydebug/build/nipy-0.4.3~rc1/lib/fff
creating build/temp.linux-x86_64-3.9-pydebug/build/nipy-0.4.3~rc1/lib/fff_python_wrapper
creating build/temp.linux-x86_64-3.9-pydebug/build/nipy-0.4.3~rc1/lib/lapack_lite
compile options: '-I/usr/lib/python3/dist-packages/numpy/core/include -Inipy/algorithms/registration -Inipy/algorithms/slicetiming -Inipy/algorithms/segmentation -Inipy/algorithms/statistics -I/build/nipy-0.4.3~rc1/lib/fff -I/build/nipy-0.4.3~rc1/lib/fff_python_wrapper -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.9d -c'
x86_64-linux-gnu-gcc: /build/nipy-0.4.3~rc1/lib/fff/fff_array.c
x86_64-linux-gnu-gcc: /build/nipy-0.4.3~rc1/lib/fff/fff_base.c
x86_64-linux-gnu-gcc: /build/nipy-0.4.3~rc1/lib/fff/fff_blas.c
x86_64-linux-gnu-gcc: /build/nipy-0.4.3~rc1/lib/fff/fff_glm_kalman.c
x86_64-linux-gnu-gcc: /build/nipy-0.4.3~rc1/lib/fff/fff_glm_twolevel.c
x86_64-linux-gnu-gcc: /build/nipy-0.4.3~rc1/lib/fff/fff_lapack.c
x86_64-linux-gnu-gcc: /build/nipy-0.4.3~rc1/lib/fff/fff_gen_stats.c
x86_64-linux-gnu-gcc: /build/nipy-0.4.3~rc1/lib/fff/fff_matrix.c
x86_64-linux-gnu-gcc: /build/nipy-0.4.3~rc1/lib/fff/fff_onesample_stat.c
/build/nipy-0.4.3~rc1/lib/fff/fff_blas.c: In function 'fff_blas_ddot':
/build/nipy-0.4.3~rc1/lib/fff/fff_blas.c:97:10: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'const long unsigned int'} [-Wsign-compare]
97 | if ( n != y->size )
| ^~
/build/nipy-0.4.3~rc1/lib/fff/fff_blas.c: In function 'fff_blas_dswap':
/build/nipy-0.4.3~rc1/lib/fff/fff_blas.c:142:10: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
142 | if ( n != y->size )
| ^~
/build/nipy-0.4.3~rc1/lib/fff/fff_blas.c: In function 'fff_blas_dcopy':
/build/nipy-0.4.3~rc1/lib/fff/fff_blas.c:155:10: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
155 | if ( n != y->size )
| ^~
/build/nipy-0.4.3~rc1/lib/fff/fff_blas.c: In function 'fff_blas_daxpy':
/build/nipy-0.4.3~rc1/lib/fff/fff_blas.c:168:10: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
168 | if ( n != y->size )
| ^~
/build/nipy-0.4.3~rc1/lib/fff/fff_blas.c: In function 'fff_blas_drot':
/build/nipy-0.4.3~rc1/lib/fff/fff_blas.c:202:10: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
202 | if ( n != y->size )
| ^~
/build/nipy-0.4.3~rc1/lib/fff/fff_blas.c: In function 'fff_blas_drotm':
/build/nipy-0.4.3~rc1/lib/fff/fff_blas.c:224:10: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
224 | if ( n != y->size )
| ^~
x86_64-linux-gnu-gcc: /build/nipy-0.4.3~rc1/lib/fff/fff_routines.c
/build/nipy-0.4.3~rc1/lib/fff/fff_matrix.c: In function 'fff_matrix_transpose':
/build/nipy-0.4.3~rc1/lib/fff/fff_matrix.c:264:20: warning: variable 'rB' set but not used [-Wunused-but-set-variable]
264 | size_t i, j, rA, rB;
| ^~
x86_64-linux-gnu-gcc: /build/nipy-0.4.3~rc1/lib/fff/fff_specfun.c
x86_64-linux-gnu-gcc: /build/nipy-0.4.3~rc1/lib/fff/fff_twosample_stat.c
x86_64-linux-gnu-gcc: /build/nipy-0.4.3~rc1/lib/fff/fff_vector.c
/build/nipy-0.4.3~rc1/lib/fff/fff_lapack.c: In function 'fff_lapack_dgetrf':
/build/nipy-0.4.3~rc1/lib/fff/fff_lapack.c:59:20: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
59 | (ipiv->dimX != FFF_MIN(m,n)) ||
| ^~
/build/nipy-0.4.3~rc1/lib/fff/fff_lapack.c: In function 'fff_lapack_dgeqrf':
/build/nipy-0.4.3~rc1/lib/fff/fff_lapack.c:82:19: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
82 | if ( (tau->size != FFF_MIN(m,n)) ||
| ^~
/build/nipy-0.4.3~rc1/lib/fff/fff_lapack.c: In function 'fff_lapack_dgesdd':
/build/nipy-0.4.3~rc1/lib/fff/fff_lapack.c:136:17: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
136 | if ( U->size1 != m)
| ^~
/build/nipy-0.4.3~rc1/lib/fff/fff_lapack.c:138:18: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
138 | if ( Vt->size1 != n)
| ^~
/build/nipy-0.4.3~rc1/lib/fff/fff_lapack.c:140:19: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
140 | if ( Aux->size1 != dmax)
| ^~
/build/nipy-0.4.3~rc1/lib/fff/fff_lapack.c:142:17: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
142 | if ( (s->size != dmin) ||
| ^~
/build/nipy-0.4.3~rc1/lib/fff/fff_lapack.c:147:21: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
147 | (iwork->dimX != 8*dmin) ||
| ^~
x86_64-linux-gnu-gcc: /build/nipy-0.4.3~rc1/lib/fff_python_wrapper/fffpy.c
x86_64-linux-gnu-gcc: /build/nipy-0.4.3~rc1/lib/lapack_lite/blas_lite.c
x86_64-linux-gnu-gcc: /build/nipy-0.4.3~rc1/lib/lapack_lite/dlamch.c
x86_64-linux-gnu-gcc: /build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c
x86_64-linux-gnu-gcc: /build/nipy-0.4.3~rc1/lib/lapack_lite/f2c_lite.c
/build/nipy-0.4.3~rc1/lib/lapack_lite/blas_lite.c: In function 'dgemm_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/blas_lite.c:607:57: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
607 | if (*m == 0 || *n == 0 || (*alpha == 0. || *k == 0) && *beta == 1.) {
| ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/blas_lite.c:419:31: warning: variable 'ncola' set but not used [-Wunused-but-set-variable]
419 | static integer i__, j, l, ncola;
| ^~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/blas_lite.c: In function 'dgemv_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/blas_lite.c:909:44: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
909 | if (*m == 0 || *n == 0 || *alpha == 0. && *beta == 1.) {
| ~~~~~~~~~~~~~^~~~~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/blas_lite.c: In function 'drotmg_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/blas_lite.c:1655:18: warning: variable 'igo_fmt' set but not used [-Wunused-but-set-variable]
1655 | static char *igo_fmt;
| ^~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/blas_lite.c: In function 'dsymm_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/blas_lite.c:2266:44: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
2266 | if (*m == 0 || *n == 0 || *alpha == 0. && *beta == 1.) {
| ~~~~~~~~~~~~~^~~~~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/blas_lite.c: In function 'dsymv_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/blas_lite.c:2548:33: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
2548 | if (*n == 0 || *alpha == 0. && *beta == 1.) {
| ~~~~~~~~~~~~~^~~~~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/blas_lite.c: In function 'dsyr2k_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/blas_lite.c:3363:46: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
3363 | if (*n == 0 || (*alpha == 0. || *k == 0) && *beta == 1.) {
| ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/blas_lite.c: In function 'dsyrk_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/blas_lite.c:3719:46: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
3719 | if (*n == 0 || (*alpha == 0. || *k == 0) && *beta == 1.) {
| ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/blas_lite.c: In function 'lsame_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/blas_lite.c:5588:18: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
5588 | if (inta >= 129 && inta <= 137 || inta >= 145 && inta <= 153 || inta
| ~~~~~~~~~~~~^~~~~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/blas_lite.c:5589:10: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
5588 | if (inta >= 129 && inta <= 137 || inta >= 145 && inta <= 153 || inta
| ~~~~
5589 | >= 162 && inta <= 169) {
| ~~~~~~~^~~~~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/blas_lite.c:5592:18: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
5592 | if (intb >= 129 && intb <= 137 || intb >= 145 && intb <= 153 || intb
| ~~~~~~~~~~~~^~~~~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/blas_lite.c:5593:10: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
5592 | if (intb >= 129 && intb <= 137 || intb >= 145 && intb <= 153 || intb
| ~~~~
5593 | >= 162 && intb <= 169) {
| ~~~~~~~^~~~~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlamch.c: In function 'dlamc4_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlamch.c:720:13: warning: variable 'i__1' set but not used [-Wunused-but-set-variable]
720 | integer i__1;
| ^~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlamch.c: In function 'dlamc5_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlamch.c:834:13: warning: variable 'i__1' set but not used [-Wunused-but-set-variable]
834 | integer i__1;
| ^~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c: In function 'dbdsdc_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:274:40: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
274 | } else if (*ldu < 1 || icompq == 2 && *ldu < *n) {
| ~~~~~~~~~~~~^~~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:276:41: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
276 | } else if (*ldvt < 1 || icompq == 2 && *ldvt < *n) {
| ~~~~~~~~~~~~^~~~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c: In function 'dbdsqr_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:768:27: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
768 | } else if (*ncvt == 0 && *ldvt < 1 || *ncvt > 0 && *ldvt < max(1,*n)) {
| ~~~~~~~~~~~^~~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:772:26: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
772 | } else if (*ncc == 0 && *ldc < 1 || *ncc > 0 && *ldc < max(1,*n)) {
| ~~~~~~~~~~^~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:1031:22: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
1031 | d__1)) || tol < 0. && (d__3 = e[m - 1], abs(d__3)) <= thresh)
| ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:1067:17: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
1067 | ) || tol < 0. && (d__3 = e[ll], abs(d__3)) <= thresh) {
| ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c: In function 'dgeev_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:2840:36: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
2840 | } else if (*ldvl < 1 || wantvl && *ldvl < *n) {
| ~~~~~~~^~~~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:2842:36: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
2842 | } else if (*ldvr < 1 || wantvr && *ldvr < *n) {
| ~~~~~~~^~~~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c: In function 'dgesdd_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:5337:35: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
5337 | } else if (*ldu < 1 || wntqas && *ldu < *m || wntqo && *m < *n && *ldu < *
| ~~~~~~~^~~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:5337:68: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
5337 | } else if (*ldu < 1 || wntqas && *ldu < *m || wntqo && *m < *n && *ldu < *
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~
5338 | m) {
| ~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:5340:35: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
5340 | } else if (*ldvt < 1 || wntqa && *ldvt < *n || wntqs && *ldvt < minmn ||
| ~~~~~~^~~~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:5340:58: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
5340 | } else if (*ldvt < 1 || wntqa && *ldvt < *n || wntqs && *ldvt < minmn ||
| ~~~~~~^~~~~~~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:5341:24: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
5341 | wntqo && *m >= *n && *ldvt < *n) {
| ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c: In function 'dhseqr_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:7768:34: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
7768 | } else if (*ldz < 1 || wantz && *ldz < max(1,*n)) {
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c: In function 'dlaexc_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:13223:8: warning: suggest parentheses around '+' inside '<<' [-Wparentheses]
13223 | (*n1 + 1 << 2) - 5], &c__4, &d__[(*n1 + 1 << 2) - 4], &c__4, &
| ~~~~^~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:13223:41: warning: suggest parentheses around '+' inside '<<' [-Wparentheses]
13223 | (*n1 + 1 << 2) - 5], &c__4, &d__[(*n1 + 1 << 2) - 4], &c__4, &
| ~~~~^~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c: In function 'dlaqr0_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:17755:45: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
17755 | if (ld == 0 || ld * 100 <= nw * nibble && kbot - ktop + 1 > min(
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c: In function 'dlaqr4_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:20024:45: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
20024 | if (ld == 0 || ld * 100 <= nw * nibble && kbot - ktop + 1 > min(
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c: In function 'dlaqr5_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:20637:45: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
20637 | h__[k + 3 + (k + 1) * h_dim1] == 0. && h__[k + 3
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
20638 | + (k + 2) * h_dim1] == 0.)) {
| ~~~~~~~~~~~~~~~~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c: In function 'dlascl_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:23732:37: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
23732 | } else if (*n < 0 || itype == 4 && *n != *m || itype == 5 && *n != *m) {
| ~~~~~~~~~~~^~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:23732:63: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
23732 | } else if (*n < 0 || itype == 4 && *n != *m || itype == 5 && *n != *m) {
| ~~~~~~~~~~~^~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:23744:69: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
23744 | if (*ku < 0 || *ku > max(i__1,0) || (itype == 4 || itype == 5) &&
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~
23745 | *kl != *ku) {
| ~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:23747:28: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
23747 | } else if (itype == 4 && *lda < *kl + 1 || itype == 5 && *lda < *
| ~~~~~~~~~~~^~~~~~~~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:23748:28: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
23748 | ku + 1 || itype == 6 && *lda < (*kl << 1) + *ku + 1) {
| ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c: In function 'dlasdq_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:28444:27: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
28444 | } else if (*ncvt == 0 && *ldvt < 1 || *ncvt > 0 && *ldvt < max(1,*n)) {
| ~~~~~~~~~~~^~~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:28448:26: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
28448 | } else if (*ncc == 0 && *ldc < 1 || *ncc > 0 && *ldc < max(1,*n)) {
| ~~~~~~~~~~^~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c: In function 'dlasq2_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:29218:15: warning: suggest parentheses around '-' inside '<<' [-Wparentheses]
29218 | i__1 = *n - 1 << 1;
| ~~~^~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:29297:12: warning: suggest parentheses around '+' inside '<<' [-Wparentheses]
29297 | ipn4 = i0 + n0 << 2;
| ~~~^~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:29298:17: warning: suggest parentheses around '-' inside '<<' [-Wparentheses]
29298 | i__1 = i0 + n0 - 1 << 1;
| ~~~~~~~~^~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:29318:16: warning: suggest parentheses around '-' inside '<<' [-Wparentheses]
29318 | for (i4 = (n0 - 1 << 2) + pp; i4 >= i__1; i4 += -4) {
| ~~~^~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:29332:13: warning: suggest parentheses around '-' inside '<<' [-Wparentheses]
29332 | i__1 = (n0 - 1 << 2) + pp;
| ~~~^~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:29386:15: warning: suggest parentheses around '-' inside '<<' [-Wparentheses]
29386 | ndiv = n0 - i0 << 1;
| ~~~^~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:29490:17: warning: suggest parentheses around '-' inside '<<' [-Wparentheses]
29490 | i__3 = n0 - 3 << 2;
| ~~~^~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c: In function 'dlasq5_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:29661:17: warning: suggest parentheses around '-' inside '<<' [-Wparentheses]
29661 | i__1 = *n0 - 3 << 2;
| ~~~~^~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:29674:17: warning: suggest parentheses around '-' inside '<<' [-Wparentheses]
29674 | i__1 = *n0 - 3 << 2;
| ~~~~^~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:29692:12: warning: suggest parentheses around '-' inside '<<' [-Wparentheses]
29692 | j4 = (*n0 - 2 << 2) - *pp;
| ~~~~^~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:29712:17: warning: suggest parentheses around '-' inside '<<' [-Wparentheses]
29712 | i__1 = *n0 - 3 << 2;
| ~~~~^~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:29728:17: warning: suggest parentheses around '-' inside '<<' [-Wparentheses]
29728 | i__1 = *n0 - 3 << 2;
| ~~~~^~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:29749:12: warning: suggest parentheses around '-' inside '<<' [-Wparentheses]
29749 | j4 = (*n0 - 2 << 2) - *pp;
| ~~~~^~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c: In function 'dlasq6_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:29863:13: warning: suggest parentheses around '-' inside '<<' [-Wparentheses]
29863 | i__1 = *n0 - 3 << 2;
| ~~~~^~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:29887:13: warning: suggest parentheses around '-' inside '<<' [-Wparentheses]
29887 | i__1 = *n0 - 3 << 2;
| ~~~~^~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:29916:15: warning: suggest parentheses around '-' inside '<<' [-Wparentheses]
29916 | j4 = (*n0 - 2 << 2) - *pp;
| ~~~~^~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c: In function 'dlazq3_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:32091:17: warning: suggest parentheses around '+' inside '<<' [-Wparentheses]
32091 | ipn4 = *i0 + *n0 << 2;
| ~~~~^~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:32092:23: warning: suggest parentheses around '-' inside '<<' [-Wparentheses]
32092 | i__1 = *i0 + *n0 - 1 << 1;
| ~~~~~~~~~~^~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:32159:53: warning: suggest parentheses around '-' inside '<<' [-Wparentheses]
32159 | } else if (*dmin__ < 0. && *dmin1 > 0. && z__[(*n0 - 1 << 2) - *pp] <
| ~~~~^~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:32164:15: warning: suggest parentheses around '-' inside '<<' [-Wparentheses]
32164 | z__[(*n0 - 1 << 2) - *pp + 2] = 0.;
| ~~~~^~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c: In function 'dorgbr_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:32887:32: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
32887 | } else if (*n < 0 || wantq && (*n > *m || *n < min(*m,*k)) || ! wantq && (
| ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:32887:75: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
32887 | } else if (*n < 0 || wantq && (*n > *m || *n < min(*m,*k)) || ! wantq && (
| ~~~~~~~~^~~~
32888 | *m > *n || *m < min(*n,*k))) {
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c: In function 'dorm2l_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:34048:14: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
34048 | if (left && notran || ! left && ! notran) {
| ~~~~~^~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c: In function 'dorm2r_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:34249:14: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
34249 | if (left && ! notran || ! left && notran) {
| ~~~~~^~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c: In function 'dormbr_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:34489:13: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
34489 | if (applyq && *lda < max(1,nq) || ! applyq && *lda < max(i__1,i__2)) {
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c: In function 'dorml2_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:34786:14: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
34786 | if (left && notran || ! left && ! notran) {
| ~~~~~^~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c: In function 'dormlq_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:35078:11: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
35078 | if (left && notran || ! left && ! notran) {
| ~~~~~^~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c: In function 'dormql_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:35391:11: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
35391 | if (left && notran || ! left && ! notran) {
| ~~~~~^~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c: In function 'dormqr_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:35689:11: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
35689 | if (left && ! notran || ! left && notran) {
| ~~~~~^~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c: In function 'dstedc_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:36623:39: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
36623 | } else if (*ldz < 1 || icompz > 0 && *ldz < max(1,*n)) {
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:36638:17: warning: suggest parentheses around '-' inside '<<' [-Wparentheses]
36638 | lwmin = *n - 1 << 1;
| ~~~^~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c: In function 'dsteqr_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:37043:39: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
37043 | } else if (*ldz < 1 || icompz > 0 && *ldz < max(1,*n)) {
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c: In function 'dtrevc_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:39115:35: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
39115 | } else if (*ldvl < 1 || leftv && *ldvl < *n) {
| ~~~~~~^~~~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:39117:36: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
39117 | } else if (*ldvr < 1 || rightv && *ldvr < *n) {
| ~~~~~~~^~~~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c: In function 'dtrexc_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:40230:34: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
40230 | } else if (*ldq < 1 || wantq && *ldq < max(1,*n)) {
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c: In function 'ilaenv_':
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:40822:16: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
40822 | if (ic >= 129 && ic <= 137 || ic >= 145 && ic <= 153 || ic >= 162 &&
| ~~~~~~~~~~^~~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:40822:68: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
40822 | if (ic >= 129 && ic <= 137 || ic >= 145 && ic <= 153 || ic >= 162 &&
| ~~~~~~~~~~^~
40823 | ic <= 169) {
| ~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:40827:17: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
40827 | if (ic >= 129 && ic <= 137 || ic >= 145 && ic <= 153 || ic >=
| ~~~~~~~~~~^~~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/lapack_lite/dlapack_lite.c:40828:8: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
40827 | if (ic >= 129 && ic <= 137 || ic >= 145 && ic <= 153 || ic >=
| ~~~~~
40828 | 162 && ic <= 169) {
| ~~~~^~~~~~~~~~~~
In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
from /build/nipy-0.4.3~rc1/lib/fff_python_wrapper/fffpy.h:2,
from /build/nipy-0.4.3~rc1/lib/fff_python_wrapper/fffpy.c:1:
/usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
/build/nipy-0.4.3~rc1/lib/fff_python_wrapper/fffpy.c: In function 'fffpy_import_array':
/build/nipy-0.4.3~rc1/lib/fff_python_wrapper/fffpy.c:17:3: warning: returning 'void *' from a function with return type 'IMP_OUT' {aka 'int'} makes integer from pointer without a cast [-Wint-conversion]
17 | import_array();
| ^~~~~~~~~~~~
/build/nipy-0.4.3~rc1/lib/fff_python_wrapper/fffpy.c: In function '_fff_vector_new_from_buffer':
/build/nipy-0.4.3~rc1/lib/fff_python_wrapper/fffpy.c:68:40: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
68 | if ((type == NPY_DOUBLE) && (itemsize==sizeof_double)) {
| ^~
/build/nipy-0.4.3~rc1/lib/fff_python_wrapper/fffpy.c: In function 'fffpy_multi_iterator_delete':
/build/nipy-0.4.3~rc1/lib/fff_python_wrapper/fffpy.c:591:13: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare]
591 | for(i=0; i<thisone->narr; i++)
| ^
/build/nipy-0.4.3~rc1/lib/fff_python_wrapper/fffpy.c: In function 'fffpy_multi_iterator_update':
/build/nipy-0.4.3~rc1/lib/fff_python_wrapper/fffpy.c:603:13: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare]
603 | for(i=0; i<thisone->narr; i++)
| ^
/build/nipy-0.4.3~rc1/lib/fff_python_wrapper/fffpy.c: In function 'fffpy_multi_iterator_reset':
/build/nipy-0.4.3~rc1/lib/fff_python_wrapper/fffpy.c:614:13: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare]
614 | for(i=0; i<thisone->narr; i++)
| ^
/build/nipy-0.4.3~rc1/lib/fff_python_wrapper/fffpy.c: In function 'fffpy_import_array':
/build/nipy-0.4.3~rc1/lib/fff_python_wrapper/fffpy.c:18:1: warning: control reaches end of non-void function [-Wreturn-type]
18 | }
| ^
x86_64-linux-gnu-gcc-ar: adding 18 object files to build/temp.linux-x86_64-3.9-pydebug/libcstat.a
running build_ext
customize UnixCCompiler
customize UnixCCompiler using MyBuildExt
building 'nipy.algorithms.registration._registration' extension
compiling C sources
C compiler: x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -g -Og -Wall -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/build/nipy-0.4.3~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC
creating build/temp.linux-x86_64-3.9-pydebug/build/src.linux-x86_64-3.9
creating build/temp.linux-x86_64-3.9-pydebug/build/src.linux-x86_64-3.9/nipy
creating build/temp.linux-x86_64-3.9-pydebug/build/src.linux-x86_64-3.9/nipy/algorithms
creating build/temp.linux-x86_64-3.9-pydebug/build/src.linux-x86_64-3.9/nipy/algorithms/registration
creating build/temp.linux-x86_64-3.9-pydebug/nipy
creating build/temp.linux-x86_64-3.9-pydebug/nipy/algorithms
creating build/temp.linux-x86_64-3.9-pydebug/nipy/algorithms/registration
compile options: '-I/usr/lib/python3/dist-packages/numpy/core/include -Inipy/algorithms/registration -Inipy/algorithms/slicetiming -Inipy/algorithms/segmentation -Inipy/algorithms/statistics -I/build/nipy-0.4.3~rc1/lib/fff -I/build/nipy-0.4.3~rc1/lib/fff_python_wrapper -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.9d -c'
x86_64-linux-gnu-gcc: build/src.linux-x86_64-3.9/nipy/algorithms/registration/_registration.c
x86_64-linux-gnu-gcc: nipy/algorithms/registration/joint_histogram.c
x86_64-linux-gnu-gcc: nipy/algorithms/registration/wichmann_prng.c
x86_64-linux-gnu-gcc: nipy/algorithms/registration/cubic_spline.c
x86_64-linux-gnu-gcc: nipy/algorithms/registration/polyaffine.c
In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
from nipy/algorithms/registration/polyaffine.h:16,
from nipy/algorithms/registration/polyaffine.c:1:
/usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
from nipy/algorithms/registration/joint_histogram.h:27,
from nipy/algorithms/registration/joint_histogram.c:1:
/usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
nipy/algorithms/registration/joint_histogram.c: In function 'L1_moments':
nipy/algorithms/registration/joint_histogram.c:358:14: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
358 | for (i=0; i<size; i++, buf+=offset)
| ^
nipy/algorithms/registration/joint_histogram.c:398:13: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
398 | if (med < size) {
| ^
nipy/algorithms/registration/joint_histogram.c:400:20: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
400 | for (i=med; i<size; i ++, buf += offset)
| ^
In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
from nipy/algorithms/registration/cubic_spline.h:35,
from nipy/algorithms/registration/cubic_spline.c:1:
/usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
nipy/algorithms/registration/cubic_spline.c: In function '_cubic_spline_transform1d':
nipy/algorithms/registration/cubic_spline.c:107:14: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
107 | for (k=1; k<dim; k++) {
| ^
nipy/algorithms/registration/cubic_spline.c:114:14: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
114 | for (k=2; k<dim; k++) {
| ^
nipy/algorithms/registration/cubic_spline.c:131:14: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
131 | for (k=1; k<dim; k++) {
| ^
nipy/algorithms/registration/cubic_spline.c:144:14: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
144 | for (k=1; k<dim; k++) {
| ^
nipy/algorithms/registration/cubic_spline.c: In function 'cubic_spline_transform':
nipy/algorithms/registration/cubic_spline.c:205:19: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare]
205 | for(axis=0; axis<res->nd; axis++) {
| ^
nipy/algorithms/registration/cubic_spline.c:215:19: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare]
215 | for(axis=0; axis<res->nd; axis++)
| ^
nipy/algorithms/registration/cubic_spline.c: In function '_mirrored_position':
nipy/algorithms/registration/cubic_spline.c:634:14: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
634 | else if (x > ddim)
| ^
nipy/algorithms/registration/cubic_spline.c: In function '_mirror_grid_neighbors':
nipy/algorithms/registration/cubic_spline.c:690:23: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
690 | if ((*px>=3) && (*px<=3*ddim)) {
| ^~
nipy/algorithms/registration/cubic_spline.c: In function '_neighbors_zero_outside':
nipy/algorithms/registration/cubic_spline.c:717:14: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
717 | if (*px>dim) { /* ddim<=x<dim, px=dim+1 */
| ^
In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
from build/src.linux-x86_64-3.9/nipy/algorithms/registration/_registration.c:611:
/usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -g -O2 -fdebug-prefix-map=/build/nipy-0.4.3~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.9-pydebug/build/src.linux-x86_64-3.9/nipy/algorithms/registration/_registration.o build/temp.linux-x86_64-3.9-pydebug/nipy/algorithms/registration/joint_histogram.o build/temp.linux-x86_64-3.9-pydebug/nipy/algorithms/registration/wichmann_prng.o build/temp.linux-x86_64-3.9-pydebug/nipy/algorithms/registration/cubic_spline.o build/temp.linux-x86_64-3.9-pydebug/nipy/algorithms/registration/polyaffine.o -Lbuild/temp.linux-x86_64-3.9-pydebug -o /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/registration/_registration.cpython-39d-x86_64-linux-gnu.so
building 'nipy.algorithms.segmentation._segmentation' extension
compiling C sources
C compiler: x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -g -Og -Wall -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/build/nipy-0.4.3~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC
creating build/temp.linux-x86_64-3.9-pydebug/build/src.linux-x86_64-3.9/nipy/algorithms/segmentation
creating build/temp.linux-x86_64-3.9-pydebug/nipy/algorithms/segmentation
compile options: '-I/usr/lib/python3/dist-packages/numpy/core/include -Inipy/algorithms/registration -Inipy/algorithms/slicetiming -Inipy/algorithms/segmentation -Inipy/algorithms/statistics -I/build/nipy-0.4.3~rc1/lib/fff -I/build/nipy-0.4.3~rc1/lib/fff_python_wrapper -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.9d -c'
x86_64-linux-gnu-gcc: build/src.linux-x86_64-3.9/nipy/algorithms/segmentation/_segmentation.c
x86_64-linux-gnu-gcc: nipy/algorithms/segmentation/mrf.c
In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
from nipy/algorithms/segmentation/mrf.h:16,
from nipy/algorithms/segmentation/mrf.c:1:
/usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
from build/src.linux-x86_64-3.9/nipy/algorithms/segmentation/_segmentation.c:611:
/usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -g -O2 -fdebug-prefix-map=/build/nipy-0.4.3~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.9-pydebug/build/src.linux-x86_64-3.9/nipy/algorithms/segmentation/_segmentation.o build/temp.linux-x86_64-3.9-pydebug/nipy/algorithms/segmentation/mrf.o -Lbuild/temp.linux-x86_64-3.9-pydebug -o /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/segmentation/_segmentation.cpython-39d-x86_64-linux-gnu.so
building 'nipy.algorithms.statistics.intvol' extension
compiling C sources
C compiler: x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -g -Og -Wall -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/build/nipy-0.4.3~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC
creating build/temp.linux-x86_64-3.9-pydebug/build/src.linux-x86_64-3.9/nipy/algorithms/statistics
compile options: '-I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/lib/python3/dist-packages/numpy/core/include -Inipy/algorithms/registration -Inipy/algorithms/slicetiming -Inipy/algorithms/segmentation -Inipy/algorithms/statistics -I/build/nipy-0.4.3~rc1/lib/fff -I/build/nipy-0.4.3~rc1/lib/fff_python_wrapper -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.9d -c'
x86_64-linux-gnu-gcc: build/src.linux-x86_64-3.9/nipy/algorithms/statistics/intvol.c
In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
from build/src.linux-x86_64-3.9/nipy/algorithms/statistics/intvol.c:610:
/usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -g -O2 -fdebug-prefix-map=/build/nipy-0.4.3~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.9-pydebug/build/src.linux-x86_64-3.9/nipy/algorithms/statistics/intvol.o -Lbuild/temp.linux-x86_64-3.9-pydebug -o /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/statistics/intvol.cpython-39d-x86_64-linux-gnu.so
building 'nipy.algorithms.statistics.histogram' extension
compiling C sources
C compiler: x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -g -Og -Wall -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/build/nipy-0.4.3~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC
compile options: '-I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/lib/python3/dist-packages/numpy/core/include -Inipy/algorithms/registration -Inipy/algorithms/slicetiming -Inipy/algorithms/segmentation -Inipy/algorithms/statistics -I/build/nipy-0.4.3~rc1/lib/fff -I/build/nipy-0.4.3~rc1/lib/fff_python_wrapper -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.9d -c'
x86_64-linux-gnu-gcc: build/src.linux-x86_64-3.9/nipy/algorithms/statistics/histogram.c
In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
from build/src.linux-x86_64-3.9/nipy/algorithms/statistics/histogram.c:610:
/usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -g -O2 -fdebug-prefix-map=/build/nipy-0.4.3~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.9-pydebug/build/src.linux-x86_64-3.9/nipy/algorithms/statistics/histogram.o -Lbuild/temp.linux-x86_64-3.9-pydebug -o /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/statistics/histogram.cpython-39d-x86_64-linux-gnu.so
building 'nipy.algorithms.statistics._quantile' extension
compiling C sources
C compiler: x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -g -Og -Wall -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/build/nipy-0.4.3~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC
creating build/temp.linux-x86_64-3.9-pydebug/nipy/algorithms/statistics
compile options: '-I/usr/lib/python3/dist-packages/numpy/core/include -Inipy/algorithms/registration -Inipy/algorithms/slicetiming -Inipy/algorithms/segmentation -Inipy/algorithms/statistics -I/build/nipy-0.4.3~rc1/lib/fff -I/build/nipy-0.4.3~rc1/lib/fff_python_wrapper -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.9d -c'
x86_64-linux-gnu-gcc: build/src.linux-x86_64-3.9/nipy/algorithms/statistics/_quantile.c
x86_64-linux-gnu-gcc: nipy/algorithms/statistics/quantile.c
In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
from nipy/algorithms/statistics/quantile.h:9,
from nipy/algorithms/statistics/quantile.c:1:
/usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:21,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
from nipy/algorithms/statistics/quantile.h:9,
from nipy/algorithms/statistics/quantile.c:1:
/usr/lib/python3/dist-packages/numpy/core/include/numpy/__multiarray_api.h:1463:1: warning: '_import_array' defined but not used [-Wunused-function]
1463 | _import_array(void)
| ^~~~~~~~~~~~~
In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
from build/src.linux-x86_64-3.9/nipy/algorithms/statistics/_quantile.c:610:
/usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -g -O2 -fdebug-prefix-map=/build/nipy-0.4.3~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.9-pydebug/build/src.linux-x86_64-3.9/nipy/algorithms/statistics/_quantile.o build/temp.linux-x86_64-3.9-pydebug/nipy/algorithms/statistics/quantile.o -Lbuild/temp.linux-x86_64-3.9-pydebug -o /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/statistics/_quantile.cpython-39d-x86_64-linux-gnu.so
building 'nipy.algorithms.graph._graph' extension
compiling C sources
C compiler: x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -g -Og -Wall -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/build/nipy-0.4.3~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC
creating build/temp.linux-x86_64-3.9-pydebug/nipy/algorithms/graph
compile options: '-I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/lib/python3/dist-packages/numpy/core/include -Inipy/algorithms/registration -Inipy/algorithms/slicetiming -Inipy/algorithms/segmentation -Inipy/algorithms/statistics -I/build/nipy-0.4.3~rc1/lib/fff -I/build/nipy-0.4.3~rc1/lib/fff_python_wrapper -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.9d -c'
x86_64-linux-gnu-gcc: nipy/algorithms/graph/_graph.c
In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
from nipy/algorithms/graph/_graph.c:256:
/usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
nipy/algorithms/graph/_graph.c: In function '__Pyx_ParseOptionalKeywords':
nipy/algorithms/graph/_graph.c:3880:21: warning: '_PyUnicode_get_wstr_length' is deprecated [-Wdeprecated-declarations]
3880 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 :
| ^
In file included from /usr/include/python3.9d/unicodeobject.h:1026,
from /usr/include/python3.9d/Python.h:97,
from nipy/algorithms/graph/_graph.c:4:
/usr/include/python3.9d/cpython/unicodeobject.h:446:26: note: declared here
446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) {
| ^~~~~~~~~~~~~~~~~~~~~~~~~~
nipy/algorithms/graph/_graph.c:3880:21: warning: 'PyUnicode_AsUnicode' is deprecated [-Wdeprecated-declarations]
3880 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 :
| ^
In file included from /usr/include/python3.9d/unicodeobject.h:1026,
from /usr/include/python3.9d/Python.h:97,
from nipy/algorithms/graph/_graph.c:4:
/usr/include/python3.9d/cpython/unicodeobject.h:580:45: note: declared here
580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode(
| ^~~~~~~~~~~~~~~~~~~
nipy/algorithms/graph/_graph.c:3880:21: warning: '_PyUnicode_get_wstr_length' is deprecated [-Wdeprecated-declarations]
3880 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 :
| ^
In file included from /usr/include/python3.9d/unicodeobject.h:1026,
from /usr/include/python3.9d/Python.h:97,
from nipy/algorithms/graph/_graph.c:4:
/usr/include/python3.9d/cpython/unicodeobject.h:446:26: note: declared here
446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) {
| ^~~~~~~~~~~~~~~~~~~~~~~~~~
nipy/algorithms/graph/_graph.c:3880:21: warning: '_PyUnicode_get_wstr_length' is deprecated [-Wdeprecated-declarations]
3880 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 :
| ^
In file included from /usr/include/python3.9d/unicodeobject.h:1026,
from /usr/include/python3.9d/Python.h:97,
from nipy/algorithms/graph/_graph.c:4:
/usr/include/python3.9d/cpython/unicodeobject.h:446:26: note: declared here
446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) {
| ^~~~~~~~~~~~~~~~~~~~~~~~~~
nipy/algorithms/graph/_graph.c:3880:21: warning: 'PyUnicode_AsUnicode' is deprecated [-Wdeprecated-declarations]
3880 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 :
| ^
In file included from /usr/include/python3.9d/unicodeobject.h:1026,
from /usr/include/python3.9d/Python.h:97,
from nipy/algorithms/graph/_graph.c:4:
/usr/include/python3.9d/cpython/unicodeobject.h:580:45: note: declared here
580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode(
| ^~~~~~~~~~~~~~~~~~~
nipy/algorithms/graph/_graph.c:3880:21: warning: '_PyUnicode_get_wstr_length' is deprecated [-Wdeprecated-declarations]
3880 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 :
| ^
In file included from /usr/include/python3.9d/unicodeobject.h:1026,
from /usr/include/python3.9d/Python.h:97,
from nipy/algorithms/graph/_graph.c:4:
/usr/include/python3.9d/cpython/unicodeobject.h:446:26: note: declared here
446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) {
| ^~~~~~~~~~~~~~~~~~~~~~~~~~
nipy/algorithms/graph/_graph.c:3896:25: warning: '_PyUnicode_get_wstr_length' is deprecated [-Wdeprecated-declarations]
3896 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 :
| ^
In file included from /usr/include/python3.9d/unicodeobject.h:1026,
from /usr/include/python3.9d/Python.h:97,
from nipy/algorithms/graph/_graph.c:4:
/usr/include/python3.9d/cpython/unicodeobject.h:446:26: note: declared here
446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) {
| ^~~~~~~~~~~~~~~~~~~~~~~~~~
nipy/algorithms/graph/_graph.c:3896:25: warning: 'PyUnicode_AsUnicode' is deprecated [-Wdeprecated-declarations]
3896 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 :
| ^
In file included from /usr/include/python3.9d/unicodeobject.h:1026,
from /usr/include/python3.9d/Python.h:97,
from nipy/algorithms/graph/_graph.c:4:
/usr/include/python3.9d/cpython/unicodeobject.h:580:45: note: declared here
580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode(
| ^~~~~~~~~~~~~~~~~~~
nipy/algorithms/graph/_graph.c:3896:25: warning: '_PyUnicode_get_wstr_length' is deprecated [-Wdeprecated-declarations]
3896 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 :
| ^
In file included from /usr/include/python3.9d/unicodeobject.h:1026,
from /usr/include/python3.9d/Python.h:97,
from nipy/algorithms/graph/_graph.c:4:
/usr/include/python3.9d/cpython/unicodeobject.h:446:26: note: declared here
446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) {
| ^~~~~~~~~~~~~~~~~~~~~~~~~~
nipy/algorithms/graph/_graph.c:3896:25: warning: '_PyUnicode_get_wstr_length' is deprecated [-Wdeprecated-declarations]
3896 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 :
| ^
In file included from /usr/include/python3.9d/unicodeobject.h:1026,
from /usr/include/python3.9d/Python.h:97,
from nipy/algorithms/graph/_graph.c:4:
/usr/include/python3.9d/cpython/unicodeobject.h:446:26: note: declared here
446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) {
| ^~~~~~~~~~~~~~~~~~~~~~~~~~
nipy/algorithms/graph/_graph.c:3896:25: warning: 'PyUnicode_AsUnicode' is deprecated [-Wdeprecated-declarations]
3896 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 :
| ^
In file included from /usr/include/python3.9d/unicodeobject.h:1026,
from /usr/include/python3.9d/Python.h:97,
from nipy/algorithms/graph/_graph.c:4:
/usr/include/python3.9d/cpython/unicodeobject.h:580:45: note: declared here
580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode(
| ^~~~~~~~~~~~~~~~~~~
nipy/algorithms/graph/_graph.c:3896:25: warning: '_PyUnicode_get_wstr_length' is deprecated [-Wdeprecated-declarations]
3896 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 :
| ^
In file included from /usr/include/python3.9d/unicodeobject.h:1026,
from /usr/include/python3.9d/Python.h:97,
from nipy/algorithms/graph/_graph.c:4:
/usr/include/python3.9d/cpython/unicodeobject.h:446:26: note: declared here
446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) {
| ^~~~~~~~~~~~~~~~~~~~~~~~~~
nipy/algorithms/graph/_graph.c: In function '__Pyx_Raise':
nipy/algorithms/graph/_graph.c:4637:9: warning: 'PyEval_CallObjectWithKeywords' is deprecated [-Wdeprecated-declarations]
4637 | owned_instance = PyEval_CallObject(type, args);
| ^~~~~~~~~~~~~~
In file included from /usr/include/python3.9d/Python.h:145,
from nipy/algorithms/graph/_graph.c:4:
/usr/include/python3.9d/ceval.h:17:43: note: declared here
17 | Py_DEPRECATED(3.9) PyAPI_FUNC(PyObject *) PyEval_CallObjectWithKeywords(
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:21,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
from nipy/algorithms/graph/_graph.c:256:
At top level:
/usr/lib/python3/dist-packages/numpy/core/include/numpy/__multiarray_api.h:1463:1: warning: '_import_array' defined but not used [-Wunused-function]
1463 | _import_array(void)
| ^~~~~~~~~~~~~
x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -g -O2 -fdebug-prefix-map=/build/nipy-0.4.3~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.9-pydebug/nipy/algorithms/graph/_graph.o -Lbuild/temp.linux-x86_64-3.9-pydebug -o /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/algorithms/graph/_graph.cpython-39d-x86_64-linux-gnu.so
building 'nipy.labs.bindings.linalg' extension
compiling C sources
C compiler: x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -g -Og -Wall -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/build/nipy-0.4.3~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC
creating build/temp.linux-x86_64-3.9-pydebug/build/src.linux-x86_64-3.9/nipy/labs
creating build/temp.linux-x86_64-3.9-pydebug/build/src.linux-x86_64-3.9/nipy/labs/bindings
compile options: '-I/usr/lib/python3/dist-packages/numpy/core/include -Inipy/algorithms/registration -Inipy/algorithms/slicetiming -Inipy/algorithms/segmentation -Inipy/algorithms/statistics -I/build/nipy-0.4.3~rc1/lib/fff -I/build/nipy-0.4.3~rc1/lib/fff_python_wrapper -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.9d -c'
x86_64-linux-gnu-gcc: build/src.linux-x86_64-3.9/nipy/labs/bindings/linalg.c
In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
from build/src.linux-x86_64-3.9/nipy/labs/bindings/linalg.c:610:
/usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -g -O2 -fdebug-prefix-map=/build/nipy-0.4.3~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.9-pydebug/build/src.linux-x86_64-3.9/nipy/labs/bindings/linalg.o -Lbuild/temp.linux-x86_64-3.9-pydebug -lcstat -o /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/labs/bindings/linalg.cpython-39d-x86_64-linux-gnu.so
building 'nipy.labs.bindings.array' extension
compiling C sources
C compiler: x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -g -Og -Wall -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/build/nipy-0.4.3~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC
compile options: '-I/usr/lib/python3/dist-packages/numpy/core/include -Inipy/algorithms/registration -Inipy/algorithms/slicetiming -Inipy/algorithms/segmentation -Inipy/algorithms/statistics -I/build/nipy-0.4.3~rc1/lib/fff -I/build/nipy-0.4.3~rc1/lib/fff_python_wrapper -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.9d -c'
x86_64-linux-gnu-gcc: build/src.linux-x86_64-3.9/nipy/labs/bindings/array.c
In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
from build/src.linux-x86_64-3.9/nipy/labs/bindings/array.c:610:
/usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -g -O2 -fdebug-prefix-map=/build/nipy-0.4.3~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.9-pydebug/build/src.linux-x86_64-3.9/nipy/labs/bindings/array.o -Lbuild/temp.linux-x86_64-3.9-pydebug -lcstat -o /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/labs/bindings/array.cpython-39d-x86_64-linux-gnu.so
building 'nipy.labs.bindings.wrapper' extension
compiling C sources
C compiler: x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -g -Og -Wall -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/build/nipy-0.4.3~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC
compile options: '-I/usr/lib/python3/dist-packages/numpy/core/include -Inipy/algorithms/registration -Inipy/algorithms/slicetiming -Inipy/algorithms/segmentation -Inipy/algorithms/statistics -I/build/nipy-0.4.3~rc1/lib/fff -I/build/nipy-0.4.3~rc1/lib/fff_python_wrapper -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.9d -c'
x86_64-linux-gnu-gcc: build/src.linux-x86_64-3.9/nipy/labs/bindings/wrapper.c
In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
from build/src.linux-x86_64-3.9/nipy/labs/bindings/wrapper.c:610:
/usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
build/src.linux-x86_64-3.9/nipy/labs/bindings/wrapper.c: In function '__pyx_pf_4nipy_4labs_8bindings_7wrapper_12pass_vector_via_iterator':
build/src.linux-x86_64-3.9/nipy/labs/bindings/wrapper.c:2950:40: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
2950 | __pyx_t_4 = ((__pyx_v_multi->index < __pyx_v_niters) != 0);
| ^
x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -g -O2 -fdebug-prefix-map=/build/nipy-0.4.3~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.9-pydebug/build/src.linux-x86_64-3.9/nipy/labs/bindings/wrapper.o -Lbuild/temp.linux-x86_64-3.9-pydebug -lcstat -o /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/labs/bindings/wrapper.cpython-39d-x86_64-linux-gnu.so
building 'nipy.labs.glm.kalman' extension
compiling C sources
C compiler: x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -g -Og -Wall -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/build/nipy-0.4.3~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC
creating build/temp.linux-x86_64-3.9-pydebug/build/src.linux-x86_64-3.9/nipy/labs/glm
compile options: '-I/usr/lib/python3/dist-packages/numpy/core/include -Inipy/algorithms/registration -Inipy/algorithms/slicetiming -Inipy/algorithms/segmentation -Inipy/algorithms/statistics -I/build/nipy-0.4.3~rc1/lib/fff -I/build/nipy-0.4.3~rc1/lib/fff_python_wrapper -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.9d -c'
x86_64-linux-gnu-gcc: build/src.linux-x86_64-3.9/nipy/labs/glm/kalman.c
In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
from build/src.linux-x86_64-3.9/nipy/labs/glm/kalman.c:610:
/usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -g -O2 -fdebug-prefix-map=/build/nipy-0.4.3~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.9-pydebug/build/src.linux-x86_64-3.9/nipy/labs/glm/kalman.o -Lbuild/temp.linux-x86_64-3.9-pydebug -lcstat -o /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/labs/glm/kalman.cpython-39d-x86_64-linux-gnu.so
building 'nipy.labs.group.onesample' extension
compiling C sources
C compiler: x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -g -Og -Wall -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/build/nipy-0.4.3~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC
creating build/temp.linux-x86_64-3.9-pydebug/build/src.linux-x86_64-3.9/nipy/labs/group
compile options: '-I/usr/lib/python3/dist-packages/numpy/core/include -Inipy/algorithms/registration -Inipy/algorithms/slicetiming -Inipy/algorithms/segmentation -Inipy/algorithms/statistics -I/build/nipy-0.4.3~rc1/lib/fff -I/build/nipy-0.4.3~rc1/lib/fff_python_wrapper -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.9d -c'
x86_64-linux-gnu-gcc: build/src.linux-x86_64-3.9/nipy/labs/group/onesample.c
In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
from build/src.linux-x86_64-3.9/nipy/labs/group/onesample.c:610:
/usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -g -O2 -fdebug-prefix-map=/build/nipy-0.4.3~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.9-pydebug/build/src.linux-x86_64-3.9/nipy/labs/group/onesample.o -Lbuild/temp.linux-x86_64-3.9-pydebug -lcstat -o /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/labs/group/onesample.cpython-39d-x86_64-linux-gnu.so
building 'nipy.labs.group.twosample' extension
compiling C sources
C compiler: x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -g -Og -Wall -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/build/nipy-0.4.3~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC
compile options: '-I/usr/lib/python3/dist-packages/numpy/core/include -Inipy/algorithms/registration -Inipy/algorithms/slicetiming -Inipy/algorithms/segmentation -Inipy/algorithms/statistics -I/build/nipy-0.4.3~rc1/lib/fff -I/build/nipy-0.4.3~rc1/lib/fff_python_wrapper -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.9d -c'
x86_64-linux-gnu-gcc: build/src.linux-x86_64-3.9/nipy/labs/group/twosample.c
In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
from build/src.linux-x86_64-3.9/nipy/labs/group/twosample.c:610:
/usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -g -O2 -fdebug-prefix-map=/build/nipy-0.4.3~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.9-pydebug/build/src.linux-x86_64-3.9/nipy/labs/group/twosample.o -Lbuild/temp.linux-x86_64-3.9-pydebug -lcstat -o /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/labs/group/twosample.cpython-39d-x86_64-linux-gnu.so
building 'nipy.labs.group.glm_twolevel' extension
compiling C sources
C compiler: x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -g -Og -Wall -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/build/nipy-0.4.3~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC
compile options: '-I/usr/lib/python3/dist-packages/numpy/core/include -Inipy/algorithms/registration -Inipy/algorithms/slicetiming -Inipy/algorithms/segmentation -Inipy/algorithms/statistics -I/build/nipy-0.4.3~rc1/lib/fff -I/build/nipy-0.4.3~rc1/lib/fff_python_wrapper -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.9d -c'
x86_64-linux-gnu-gcc: build/src.linux-x86_64-3.9/nipy/labs/group/glm_twolevel.c
In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
from build/src.linux-x86_64-3.9/nipy/labs/group/glm_twolevel.c:610:
/usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -g -O2 -fdebug-prefix-map=/build/nipy-0.4.3~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.9-pydebug/build/src.linux-x86_64-3.9/nipy/labs/group/glm_twolevel.o -Lbuild/temp.linux-x86_64-3.9-pydebug -lcstat -o /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/labs/group/glm_twolevel.cpython-39d-x86_64-linux-gnu.so
building 'nipy.labs.utils.routines' extension
compiling C sources
C compiler: x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -g -Og -Wall -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -Og -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/build/nipy-0.4.3~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC
creating build/temp.linux-x86_64-3.9-pydebug/build/src.linux-x86_64-3.9/nipy/labs/utils
compile options: '-I/usr/lib/python3/dist-packages/numpy/core/include -Inipy/algorithms/registration -Inipy/algorithms/slicetiming -Inipy/algorithms/segmentation -Inipy/algorithms/statistics -I/build/nipy-0.4.3~rc1/lib/fff -I/build/nipy-0.4.3~rc1/lib/fff_python_wrapper -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.9d -c'
x86_64-linux-gnu-gcc: build/src.linux-x86_64-3.9/nipy/labs/utils/routines.c
In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
from build/src.linux-x86_64-3.9/nipy/labs/utils/routines.c:610:
/usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -g -O2 -fdebug-prefix-map=/build/nipy-0.4.3~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.9-pydebug/build/src.linux-x86_64-3.9/nipy/labs/utils/routines.o -Lbuild/temp.linux-x86_64-3.9-pydebug -lcstat -o /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/build/nipy/labs/utils/routines.cpython-39d-x86_64-linux-gnu.so
________________________________________________________________________________
Could not find datasource "nipy/templates" in data path "/usr/share/nipy:/usr/local/share/nipy:/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/.nipy"; Is it possible you have not installed a data package?
You may need the package "nipy-templates"
You can download and install the package from:
http://nipy.org/data-packages/nipy-templates-0.2.tar.gz
Check the instructions in the ``doc/users/install_data.rst`` file in the nipy
source tree, or online at http://nipy.org/nipy/users/install_data.html
If you have the package, have you set the path to the package correctly?
________________________________________________________________________________
Could not find datasource "nipy/data" in data path "/usr/share/nipy:/usr/local/share/nipy:/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_dbg_nipy/.nipy"; Is it possible you have not installed a data package?
You may need the package "nipy-data"
You can download and install the package from:
http://nipy.org/data-packages/nipy-data-0.2.tar.gz
Check the instructions in the ``doc/users/install_data.rst`` file in the nipy
source tree, or online at http://nipy.org/nipy/users/install_data.html
If you have the package, have you set the path to the package correctly?
running build_scripts
: # I: Generate documentation
PYTHONPATH=`pybuild --print build_dir --interpreter python3.9` \
http_proxy='127.0.0.1:9' \
PATH=/build/nipy-0.4.3~rc1/debian/tmp/usr/bin/:$PATH \
HOME=/build/nipy-0.4.3~rc1/build \
/usr/bin/make -C doc html PYTHON=python3.9
make[2]: Entering directory '/build/nipy-0.4.3~rc1/doc'
python3.9 ../tools/build_modref_templates.py
WARNING: Empty - nipy
WARNING: Empty - nipy.algorithms
WARNING: Empty - nipy.algorithms.clustering
WARNING: Empty - nipy.algorithms.diagnostics
WARNING: Empty - nipy.algorithms.graph
WARNING: Empty - nipy.algorithms.group
WARNING: Empty - nipy.algorithms.registration
WARNING: Empty - nipy.algorithms.segmentation
WARNING: Empty - nipy.algorithms.slicetiming
WARNING: Empty - nipy.algorithms.statistics
WARNING: Empty - nipy.algorithms.statistics.api
WARNING: Empty - nipy.algorithms.statistics.bench
WARNING: Empty - nipy.algorithms.statistics.formula
WARNING: Empty - nipy.algorithms.statistics.models
WARNING: Empty - nipy.algorithms.statistics.models.family
WARNING: Empty - nipy.algorithms.statistics.models.info
WARNING: Empty - nipy.algorithms.utils
WARNING: Empty - nipy.core
WARNING: Empty - nipy.core.api
WARNING: Empty - nipy.core.image
WARNING: Empty - nipy.core.image.roi
WARNING: Empty - nipy.core.reference
WARNING: Empty - nipy.core.utils
WARNING: Empty - nipy.info
WARNING: Empty - nipy.interfaces
WARNING: Empty - nipy.io
WARNING: Empty - nipy.io.api
WARNING: Empty - nipy.io.imageformats
WARNING: Empty - nipy.labs
WARNING: Empty - nipy.labs.bindings
WARNING: Empty - nipy.labs.bindings.benchmarks
WARNING: Empty - nipy.labs.datasets
WARNING: Empty - nipy.labs.datasets.transforms
WARNING: Empty - nipy.labs.datasets.volumes
WARNING: Empty - nipy.labs.glm
WARNING: Empty - nipy.labs.glm.benchmarks
WARNING: Empty - nipy.labs.group
WARNING: Empty - nipy.labs.spatial_models
WARNING: Empty - nipy.labs.utils
WARNING: Empty - nipy.labs.utils.mask
WARNING: Empty - nipy.labs.viz
WARNING: Empty - nipy.labs.viz3d
WARNING: Empty - nipy.labs.viz_tools
WARNING: Empty - nipy.labs.viz_tools.edge_detect
WARNING: Empty - nipy.labs.viz_tools.test
WARNING: Empty - nipy.modalities
WARNING: Empty - nipy.modalities.fmri
WARNING: Empty - nipy.modalities.fmri.api
WARNING: Empty - nipy.modalities.fmri.fmristat
WARNING: Empty - nipy.modalities.fmri.fmristat.api
WARNING: Empty - nipy.modalities.fmri.spm
134 files written
Build API docs finished.
mkdir -p build/html build/doctrees
sphinx-build -b html -d build/doctrees . build/html
Running Sphinx v3.3.1
WARNING: Support for evaluating Python 2 syntax is deprecated and will be removed in Sphinx 4.0. Convert /build/nipy-0.4.3~rc1/doc/conf.py to Python 3 syntax.
[autosummary] generating autosummary for: api/generated/gen.rst, api/generated/nipy.algorithms.clustering.bgmm.rst, api/generated/nipy.algorithms.clustering.ggmixture.rst, api/generated/nipy.algorithms.clustering.gmm.rst, api/generated/nipy.algorithms.clustering.hierarchical_clustering.rst, api/generated/nipy.algorithms.clustering.imm.rst, api/generated/nipy.algorithms.clustering.utils.rst, api/generated/nipy.algorithms.clustering.von_mises_fisher_mixture.rst, api/generated/nipy.algorithms.diagnostics.commands.rst, api/generated/nipy.algorithms.diagnostics.screens.rst, ..., users/basic_io.rst, users/coordinate_map.rst, users/glm_spec.rst, users/index.rst, users/install_data.rst, users/installation.rst, users/introduction.rst, users/math_coordmap.rst, users/scipy_orientation.rst, users/tutorial.rst
/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/kernel_smooth.py:100: SyntaxWarning: "is not" with a literal. Did you mean "!="?
if self.fwhm is not 1.0:
/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/viz_tools/cm.py:161: MatplotlibDeprecationWarning:
The revcmap function was deprecated in Matplotlib 3.2 and will be removed two minor releases later. Use Colormap.reversed() instead.
_cmaps_data[_cmapname_r] = _cm.revcmap(_cmapspec)
<frozen importlib._bootstrap_external>:1116: FutureWarning: Module nipy.labs.utils.routines deprecated, will be removed
/usr/lib/python3.9/importlib/__init__.py:127: FutureWarning: Module nipy.labs.group deprecated, will be removed
return _bootstrap._gcd_import(name[level:], package, level)
/usr/lib/python3.9/importlib/__init__.py:127: FutureWarning: Module nipy.algorithms.clustering.von_mises_fisher_mixturedeprecated, will be removed
return _bootstrap._gcd_import(name[level:], package, level)
/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/spatial_models/discrete_domain.py:791: SyntaxWarning: "is not" with a literal. Did you mean "!="?
if fid is not '':
/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/spatial_models/parcel_io.py:224: SyntaxWarning: "is not" with a literal. Did you mean "!="?
if test_id is not 'one_sample':
/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/spatial_models/parcel_io.py:291: SyntaxWarning: "is not" with a literal. Did you mean "!="?
if method is not 'kmeans':
/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/spatial_models/parcel_io.py:311: SyntaxWarning: "is not" with a literal. Did you mean "!="?
if method is not 'kmeans':
/usr/lib/python3.9/importlib/__init__.py:127: FutureWarning: Module nipy.labs.spatial_models.parcel_iodeprecated, will be removed
return _bootstrap._gcd_import(name[level:], package, level)
/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/glm/glm.py:150: SyntaxWarning: "is" with a literal. Did you mean "=="?
if type is 't':
/usr/lib/python3.9/importlib/__init__.py:127: FutureWarning: Module nipy.labs.glm deprecated, will be removed. Please use nipy.modalities.fmri.glm instead.
return _bootstrap._gcd_import(name[level:], package, level)
/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/modalities/fmri/glm.py:289: SyntaxWarning: "is" with a literal. Did you mean "=="?
if self.dim > 1 and contrast_type is 't':
/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/utils/reproducibility_measures.py:443: SyntaxWarning: "is not" with a literal. Did you mean "!="?
if method is not 'crfx':
/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/utils/reproducibility_measures.py:511: SyntaxWarning: "is not" with a literal. Did you mean "!="?
if method is not 'crfx':
/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/utils/reproducibility_measures.py:513: SyntaxWarning: "is not" with a literal. Did you mean "!="?
if method is not 'bsa':
/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/utils/reproducibility_measures.py:599: SyntaxWarning: "is not" with a literal. Did you mean "!="?
if method is not 'crfx':
/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/utils/reproducibility_measures.py:601: SyntaxWarning: "is not" with a literal. Did you mean "!="?
if method is not 'bsa':
/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/utils/reproducibility_measures.py:669: SyntaxWarning: "is not" with a literal. Did you mean "!="?
if ((len(variance_images) == 0) & (method is not 'crfx')):
/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/spatial_models/hierarchical_parcellation.py:16: FutureWarning: Module nipy.labs.spatial_models.parcellation deprecated, will be removed
from .parcellation import MultiSubjectParcellation
/usr/lib/python3.9/importlib/__init__.py:127: FutureWarning: Module nipy.labs.spatial_models.hierarchical_parcellationdeprecated, will be removed
return _bootstrap._gcd_import(name[level:], package, level)
/usr/lib/python3.9/importlib/__init__.py:127: FutureWarning: Module nipy.labs.bindings deprecated, will be removed
return _bootstrap._gcd_import(name[level:], package, level)
Failed to import 'nipy.modalities.fmri.fmristat.hrf': no module named nipy.modalities.fmri.fmristat.hrf
Failed to import 'nipy.modalities.fmri.hrf': no module named nipy.modalities.fmri.hrf
Failed to import 'nipy.modalities.fmri.design': no module named nipy.modalities.fmri.design
[autosummary] generating autosummary for: /build/nipy-0.4.3~rc1/doc/labs/generated/nipy.labs.datasets.volumes.volume_field.VolumeField.as_volume_img.rst, /build/nipy-0.4.3~rc1/doc/labs/generated/nipy.labs.datasets.volumes.volume_field.VolumeField.composed_with_transform.rst, /build/nipy-0.4.3~rc1/doc/labs/generated/nipy.labs.datasets.volumes.volume_field.VolumeField.resampled_to_img.rst, /build/nipy-0.4.3~rc1/doc/labs/generated/nipy.labs.datasets.volumes.volume_field.VolumeField.values_in_world.rst, /build/nipy-0.4.3~rc1/doc/labs/generated/nipy.labs.utils.mask.compute_mask.rst, /build/nipy-0.4.3~rc1/doc/labs/generated/nipy.labs.utils.mask.compute_mask_files.rst, /build/nipy-0.4.3~rc1/doc/labs/generated/nipy.labs.utils.mask.compute_mask_sessions.rst, /build/nipy-0.4.3~rc1/doc/labs/generated/nipy.labs.viz_tools.activation_maps.plot_map.rst, /build/nipy-0.4.3~rc1/doc/labs/generated/nipy.labs.viz_tools.maps_3d.affine_img_src.rst, /build/nipy-0.4.3~rc1/doc/labs/generated/nipy.labs.viz_tools.maps_3d.plot_anat_3d.rst, /build/nipy-0.4.3~rc1/doc/labs/generated/nipy.labs.viz_tools.maps_3d.plot_map_3d.rst
building [mo]: targets for 0 po files that are out of date
building [html]: targets for 223 source files that are out of date
updating environment: [new config] 234 added, 0 changed, 0 removed
reading sources... [ 0%] api/generated/gen
reading sources... [ 0%] api/generated/nipy.algorithms.clustering.bgmm
/usr/lib/python3/dist-packages/numpydoc/docscrape.py:418: UserWarning: Unknown section Fixme in the docstring of <class 'nipy.algorithms.clustering.bgmm.BGMM'> in /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/clustering/bgmm.py.
warn(msg)
reading sources... [ 1%] api/generated/nipy.algorithms.clustering.ggmixture
reading sources... [ 1%] api/generated/nipy.algorithms.clustering.gmm
/usr/lib/python3/dist-packages/numpydoc/docscrape.py:418: UserWarning: Unknown section Fixme in the docstring of <class 'nipy.algorithms.clustering.gmm.GMM'> in /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/clustering/gmm.py.
warn(msg)
reading sources... [ 2%] api/generated/nipy.algorithms.clustering.hierarchical_clustering
/usr/lib/python3/dist-packages/numpydoc/docscrape.py:418: UserWarning: Unknown section Members in the docstring of <class 'nipy.algorithms.clustering.hierarchical_clustering.WeightedForest'> in /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/clustering/hierarchical_clustering.py.
warn(msg)
/usr/lib/python3/dist-packages/numpydoc/docscrape.py:418: UserWarning: Unknown section Caveat in the docstring of <function average_link_graph at 0x7f12706c8820> in /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/clustering/hierarchical_clustering.py.
warn(msg)
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----
/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/clustering/imm.py:docstring of nipy.algorithms.clustering.imm.IMM.simple_update:3: WARNING: Block quote ends without a blank line; unexpected unindent.
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Parameters
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Parameters
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Parameters
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/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/group/parcel_analysis.py:docstring of nipy.algorithms.group.parcel_analysis.ParcelAnalysis.__init__:52: WARNING: Inline emphasis start-string without end-string.
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/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/registration/scripting.py:docstring of nipy.algorithms.registration.scripting.space_time_realign:43: WARNING: Block quote ends without a blank line; unexpected unindent.
/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/slicetiming/timefuncs.py:docstring of nipy.algorithms.slicetiming.timefuncs.st_odd0_even1:6: WARNING: Unexpected indentation.
WARNING: error while formatting signature for nipy.algorithms.statistics.formula.formulae.Beta.as_independent: Handler <function mangle_signature at 0x7f1278e89ee0> for event 'autodoc-process-signature' threw an exception (exception: .separatevars(), .expand(log=True), sympy.core.add.Add.as_two_terms(), is not a item name in "A mostly naive separation of a Mul or Add into arguments that are not\nare dependent on deps. To obtain as complete a separation of variables\nas possible, use a separation method first, e.g.:\n\n* separatevars() to change Mul, Add and Pow (including exp) into Mul\n* .expand(mul=True) to change Add or Mul into Add\n* .expand(log=True) to change log expr into an Add\n\nThe only non-naive thing that is done here is to respect noncommutative\nordering of variables and to always return (0, 0) for `self` of zero\nregardless of hints.\n\nFor nonzero `self`, the returned tuple (i, d) has the\nfollowing interpretation:\n\n* i will has no variable that appears in deps\n* d will either have terms that contain variables that are in deps, or\n be equal to 0 (when self is an Add) or 1 (when self is a Mul)\n* if self is an Add then self = i + d\n* if self is a Mul then self = i*d\n* otherwise (self, S.One) or (S.One, self) is returned.\n\nTo force the expression to be treated as an Add, use the hint as_Add=True\n\nExamples\n========\n\n-- self is an Add\n\n>>> from sympy import sin, cos, exp\n>>> from sympy.abc import x, y, z\n\n>>> (x + x*y).as_independent(x)\n(0, x*y + x)\n>>> (x + x*y).as_independent(y)\n(x, x*y)\n>>> (2*x*sin(x) + y + x + z).as_independent(x)\n(y + z, 2*x*sin(x) + x)\n>>> (2*x*sin(x) + y + x + z).as_independent(x, y)\n(z, 2*x*sin(x) + x + y)\n\n-- self is a Mul\n\n>>> (x*sin(x)*cos(y)).as_independent(x)\n(cos(y), x*sin(x))\n\nnon-commutative terms cannot always be separated out when self is a Mul\n\n>>> from sympy import symbols\n>>> n1, n2, n3 = symbols('n1 n2 n3', commutative=False)\n>>> (n1 + n1*n2).as_independent(n2)\n(n1, n1*n2)\n>>> (n2*n1 + n1*n2).as_independent(n2)\n(0, n1*n2 + n2*n1)\n>>> (n1*n2*n3).as_independent(n1)\n(1, n1*n2*n3)\n>>> (n1*n2*n3).as_independent(n2)\n(n1, n2*n3)\n>>> ((x-n1)*(x-y)).as_independent(x)\n(1, (x - y)*(x - n1))\n\n-- self is anything else:\n\n>>> (sin(x)).as_independent(x)\n(1, sin(x))\n>>> (sin(x)).as_independent(y)\n(sin(x), 1)\n>>> exp(x+y).as_independent(x)\n(1, exp(x + y))\n\n-- force self to be treated as an Add:\n\n>>> (3*x).as_independent(x, as_Add=True)\n(0, 3*x)\n\n-- force self to be treated as a Mul:\n\n>>> (3+x).as_independent(x, as_Add=False)\n(1, x + 3)\n>>> (-3+x).as_independent(x, as_Add=False)\n(1, x - 3)\n\nNote how the below differs from the above in making the\nconstant on the dep term positive.\n\n>>> (y*(-3+x)).as_independent(x)\n(y, x - 3)\n\n-- use .as_independent() for true independence testing instead\n of .has(). The former considers only symbols in the free\n symbols while the latter considers all symbols\n\n>>> from sympy import Integral\n>>> I = Integral(x, (x, 1, 2))\n>>> I.has(x)\nTrue\n>>> x in I.free_symbols\nFalse\n>>> I.as_independent(x) == (I, 1)\nTrue\n>>> (I + x).as_independent(x) == (I, x)\nTrue\n\nNote: when trying to get independent terms, a separation method\nmight need to be used first. In this case, it is important to keep\ntrack of what you send to this routine so you know how to interpret\nthe returned values\n\n>>> from sympy import separatevars, log\n>>> separatevars(exp(x+y)).as_independent(x)\n(exp(y), exp(x))\n>>> (x + x*y).as_independent(y)\n(x, x*y)\n>>> separatevars(x + x*y).as_independent(y)\n(x, y + 1)\n>>> (x*(1 + y)).as_independent(y)\n(x, y + 1)\n>>> (x*(1 + y)).expand(mul=True).as_independent(y)\n(x, x*y)\n>>> a, b=symbols('a b', positive=True)\n>>> (log(a*b).expand(log=True)).as_independent(b)\n(log(a), log(b))\n\nSee Also\n========\n.separatevars(), .expand(log=True), sympy.core.add.Add.as_two_terms(),\nsympy.core.mul.Mul.as_two_terms(), .as_coeff_add(), .as_coeff_mul()")
WARNING: error while formatting signature for nipy.algorithms.statistics.formula.formulae.Beta.is_algebraic_expr: Handler <function mangle_signature at 0x7f1278e89ee0> for event 'autodoc-process-signature' threw an exception (exception: is_rational_function() is not a item name in 'This tests whether a given expression is algebraic or not, in the\ngiven symbols, syms. When syms is not given, all free symbols\nwill be used. The rational function does not have to be in expanded\nor in any kind of canonical form.\n\nThis function returns False for expressions that are "algebraic\nexpressions" with symbolic exponents. This is a simple extension to the\nis_rational_function, including rational exponentiation.\n\nExamples\n========\n\n>>> from sympy import Symbol, sqrt\n>>> x = Symbol(\'x\', real=True)\n>>> sqrt(1 + x).is_rational_function()\nFalse\n>>> sqrt(1 + x).is_algebraic_expr()\nTrue\n\nThis function does not attempt any nontrivial simplifications that may\nresult in an expression that does not appear to be an algebraic\nexpression to become one.\n\n>>> from sympy import exp, factor\n>>> a = sqrt(exp(x)**2 + 2*exp(x) + 1)/(exp(x) + 1)\n>>> a.is_algebraic_expr(x)\nFalse\n>>> factor(a).is_algebraic_expr()\nTrue\n\nSee Also\n========\nis_rational_function()\n\nReferences\n==========\n\n- https://en.wikipedia.org/wiki/Algebraic_expression')
WARNING: error while formatting signature for nipy.algorithms.statistics.formula.formulae.FactorTerm.as_independent: Handler <function mangle_signature at 0x7f1278e89ee0> for event 'autodoc-process-signature' threw an exception (exception: .separatevars(), .expand(log=True), sympy.core.add.Add.as_two_terms(), is not a item name in "A mostly naive separation of a Mul or Add into arguments that are not\nare dependent on deps. To obtain as complete a separation of variables\nas possible, use a separation method first, e.g.:\n\n* separatevars() to change Mul, Add and Pow (including exp) into Mul\n* .expand(mul=True) to change Add or Mul into Add\n* .expand(log=True) to change log expr into an Add\n\nThe only non-naive thing that is done here is to respect noncommutative\nordering of variables and to always return (0, 0) for `self` of zero\nregardless of hints.\n\nFor nonzero `self`, the returned tuple (i, d) has the\nfollowing interpretation:\n\n* i will has no variable that appears in deps\n* d will either have terms that contain variables that are in deps, or\n be equal to 0 (when self is an Add) or 1 (when self is a Mul)\n* if self is an Add then self = i + d\n* if self is a Mul then self = i*d\n* otherwise (self, S.One) or (S.One, self) is returned.\n\nTo force the expression to be treated as an Add, use the hint as_Add=True\n\nExamples\n========\n\n-- self is an Add\n\n>>> from sympy import sin, cos, exp\n>>> from sympy.abc import x, y, z\n\n>>> (x + x*y).as_independent(x)\n(0, x*y + x)\n>>> (x + x*y).as_independent(y)\n(x, x*y)\n>>> (2*x*sin(x) + y + x + z).as_independent(x)\n(y + z, 2*x*sin(x) + x)\n>>> (2*x*sin(x) + y + x + z).as_independent(x, y)\n(z, 2*x*sin(x) + x + y)\n\n-- self is a Mul\n\n>>> (x*sin(x)*cos(y)).as_independent(x)\n(cos(y), x*sin(x))\n\nnon-commutative terms cannot always be separated out when self is a Mul\n\n>>> from sympy import symbols\n>>> n1, n2, n3 = symbols('n1 n2 n3', commutative=False)\n>>> (n1 + n1*n2).as_independent(n2)\n(n1, n1*n2)\n>>> (n2*n1 + n1*n2).as_independent(n2)\n(0, n1*n2 + n2*n1)\n>>> (n1*n2*n3).as_independent(n1)\n(1, n1*n2*n3)\n>>> (n1*n2*n3).as_independent(n2)\n(n1, n2*n3)\n>>> ((x-n1)*(x-y)).as_independent(x)\n(1, (x - y)*(x - n1))\n\n-- self is anything else:\n\n>>> (sin(x)).as_independent(x)\n(1, sin(x))\n>>> (sin(x)).as_independent(y)\n(sin(x), 1)\n>>> exp(x+y).as_independent(x)\n(1, exp(x + y))\n\n-- force self to be treated as an Add:\n\n>>> (3*x).as_independent(x, as_Add=True)\n(0, 3*x)\n\n-- force self to be treated as a Mul:\n\n>>> (3+x).as_independent(x, as_Add=False)\n(1, x + 3)\n>>> (-3+x).as_independent(x, as_Add=False)\n(1, x - 3)\n\nNote how the below differs from the above in making the\nconstant on the dep term positive.\n\n>>> (y*(-3+x)).as_independent(x)\n(y, x - 3)\n\n-- use .as_independent() for true independence testing instead\n of .has(). The former considers only symbols in the free\n symbols while the latter considers all symbols\n\n>>> from sympy import Integral\n>>> I = Integral(x, (x, 1, 2))\n>>> I.has(x)\nTrue\n>>> x in I.free_symbols\nFalse\n>>> I.as_independent(x) == (I, 1)\nTrue\n>>> (I + x).as_independent(x) == (I, x)\nTrue\n\nNote: when trying to get independent terms, a separation method\nmight need to be used first. In this case, it is important to keep\ntrack of what you send to this routine so you know how to interpret\nthe returned values\n\n>>> from sympy import separatevars, log\n>>> separatevars(exp(x+y)).as_independent(x)\n(exp(y), exp(x))\n>>> (x + x*y).as_independent(y)\n(x, x*y)\n>>> separatevars(x + x*y).as_independent(y)\n(x, y + 1)\n>>> (x*(1 + y)).as_independent(y)\n(x, y + 1)\n>>> (x*(1 + y)).expand(mul=True).as_independent(y)\n(x, x*y)\n>>> a, b=symbols('a b', positive=True)\n>>> (log(a*b).expand(log=True)).as_independent(b)\n(log(a), log(b))\n\nSee Also\n========\n.separatevars(), .expand(log=True), sympy.core.add.Add.as_two_terms(),\nsympy.core.mul.Mul.as_two_terms(), .as_coeff_add(), .as_coeff_mul()")
WARNING: error while formatting signature for nipy.algorithms.statistics.formula.formulae.FactorTerm.is_algebraic_expr: Handler <function mangle_signature at 0x7f1278e89ee0> for event 'autodoc-process-signature' threw an exception (exception: is_rational_function() is not a item name in 'This tests whether a given expression is algebraic or not, in the\ngiven symbols, syms. When syms is not given, all free symbols\nwill be used. The rational function does not have to be in expanded\nor in any kind of canonical form.\n\nThis function returns False for expressions that are "algebraic\nexpressions" with symbolic exponents. This is a simple extension to the\nis_rational_function, including rational exponentiation.\n\nExamples\n========\n\n>>> from sympy import Symbol, sqrt\n>>> x = Symbol(\'x\', real=True)\n>>> sqrt(1 + x).is_rational_function()\nFalse\n>>> sqrt(1 + x).is_algebraic_expr()\nTrue\n\nThis function does not attempt any nontrivial simplifications that may\nresult in an expression that does not appear to be an algebraic\nexpression to become one.\n\n>>> from sympy import exp, factor\n>>> a = sqrt(exp(x)**2 + 2*exp(x) + 1)/(exp(x) + 1)\n>>> a.is_algebraic_expr(x)\nFalse\n>>> factor(a).is_algebraic_expr()\nTrue\n\nSee Also\n========\nis_rational_function()\n\nReferences\n==========\n\n- https://en.wikipedia.org/wiki/Algebraic_expression')
WARNING: error while formatting signature for nipy.algorithms.statistics.formula.formulae.Term.as_independent: Handler <function mangle_signature at 0x7f1278e89ee0> for event 'autodoc-process-signature' threw an exception (exception: .separatevars(), .expand(log=True), sympy.core.add.Add.as_two_terms(), is not a item name in "A mostly naive separation of a Mul or Add into arguments that are not\nare dependent on deps. To obtain as complete a separation of variables\nas possible, use a separation method first, e.g.:\n\n* separatevars() to change Mul, Add and Pow (including exp) into Mul\n* .expand(mul=True) to change Add or Mul into Add\n* .expand(log=True) to change log expr into an Add\n\nThe only non-naive thing that is done here is to respect noncommutative\nordering of variables and to always return (0, 0) for `self` of zero\nregardless of hints.\n\nFor nonzero `self`, the returned tuple (i, d) has the\nfollowing interpretation:\n\n* i will has no variable that appears in deps\n* d will either have terms that contain variables that are in deps, or\n be equal to 0 (when self is an Add) or 1 (when self is a Mul)\n* if self is an Add then self = i + d\n* if self is a Mul then self = i*d\n* otherwise (self, S.One) or (S.One, self) is returned.\n\nTo force the expression to be treated as an Add, use the hint as_Add=True\n\nExamples\n========\n\n-- self is an Add\n\n>>> from sympy import sin, cos, exp\n>>> from sympy.abc import x, y, z\n\n>>> (x + x*y).as_independent(x)\n(0, x*y + x)\n>>> (x + x*y).as_independent(y)\n(x, x*y)\n>>> (2*x*sin(x) + y + x + z).as_independent(x)\n(y + z, 2*x*sin(x) + x)\n>>> (2*x*sin(x) + y + x + z).as_independent(x, y)\n(z, 2*x*sin(x) + x + y)\n\n-- self is a Mul\n\n>>> (x*sin(x)*cos(y)).as_independent(x)\n(cos(y), x*sin(x))\n\nnon-commutative terms cannot always be separated out when self is a Mul\n\n>>> from sympy import symbols\n>>> n1, n2, n3 = symbols('n1 n2 n3', commutative=False)\n>>> (n1 + n1*n2).as_independent(n2)\n(n1, n1*n2)\n>>> (n2*n1 + n1*n2).as_independent(n2)\n(0, n1*n2 + n2*n1)\n>>> (n1*n2*n3).as_independent(n1)\n(1, n1*n2*n3)\n>>> (n1*n2*n3).as_independent(n2)\n(n1, n2*n3)\n>>> ((x-n1)*(x-y)).as_independent(x)\n(1, (x - y)*(x - n1))\n\n-- self is anything else:\n\n>>> (sin(x)).as_independent(x)\n(1, sin(x))\n>>> (sin(x)).as_independent(y)\n(sin(x), 1)\n>>> exp(x+y).as_independent(x)\n(1, exp(x + y))\n\n-- force self to be treated as an Add:\n\n>>> (3*x).as_independent(x, as_Add=True)\n(0, 3*x)\n\n-- force self to be treated as a Mul:\n\n>>> (3+x).as_independent(x, as_Add=False)\n(1, x + 3)\n>>> (-3+x).as_independent(x, as_Add=False)\n(1, x - 3)\n\nNote how the below differs from the above in making the\nconstant on the dep term positive.\n\n>>> (y*(-3+x)).as_independent(x)\n(y, x - 3)\n\n-- use .as_independent() for true independence testing instead\n of .has(). The former considers only symbols in the free\n symbols while the latter considers all symbols\n\n>>> from sympy import Integral\n>>> I = Integral(x, (x, 1, 2))\n>>> I.has(x)\nTrue\n>>> x in I.free_symbols\nFalse\n>>> I.as_independent(x) == (I, 1)\nTrue\n>>> (I + x).as_independent(x) == (I, x)\nTrue\n\nNote: when trying to get independent terms, a separation method\nmight need to be used first. In this case, it is important to keep\ntrack of what you send to this routine so you know how to interpret\nthe returned values\n\n>>> from sympy import separatevars, log\n>>> separatevars(exp(x+y)).as_independent(x)\n(exp(y), exp(x))\n>>> (x + x*y).as_independent(y)\n(x, x*y)\n>>> separatevars(x + x*y).as_independent(y)\n(x, y + 1)\n>>> (x*(1 + y)).as_independent(y)\n(x, y + 1)\n>>> (x*(1 + y)).expand(mul=True).as_independent(y)\n(x, x*y)\n>>> a, b=symbols('a b', positive=True)\n>>> (log(a*b).expand(log=True)).as_independent(b)\n(log(a), log(b))\n\nSee Also\n========\n.separatevars(), .expand(log=True), sympy.core.add.Add.as_two_terms(),\nsympy.core.mul.Mul.as_two_terms(), .as_coeff_add(), .as_coeff_mul()")
WARNING: error while formatting signature for nipy.algorithms.statistics.formula.formulae.Term.is_algebraic_expr: Handler <function mangle_signature at 0x7f1278e89ee0> for event 'autodoc-process-signature' threw an exception (exception: is_rational_function() is not a item name in 'This tests whether a given expression is algebraic or not, in the\ngiven symbols, syms. When syms is not given, all free symbols\nwill be used. The rational function does not have to be in expanded\nor in any kind of canonical form.\n\nThis function returns False for expressions that are "algebraic\nexpressions" with symbolic exponents. This is a simple extension to the\nis_rational_function, including rational exponentiation.\n\nExamples\n========\n\n>>> from sympy import Symbol, sqrt\n>>> x = Symbol(\'x\', real=True)\n>>> sqrt(1 + x).is_rational_function()\nFalse\n>>> sqrt(1 + x).is_algebraic_expr()\nTrue\n\nThis function does not attempt any nontrivial simplifications that may\nresult in an expression that does not appear to be an algebraic\nexpression to become one.\n\n>>> from sympy import exp, factor\n>>> a = sqrt(exp(x)**2 + 2*exp(x) + 1)/(exp(x) + 1)\n>>> a.is_algebraic_expr(x)\nFalse\n>>> factor(a).is_algebraic_expr()\nTrue\n\nSee Also\n========\nis_rational_function()\n\nReferences\n==========\n\n- https://en.wikipedia.org/wiki/Algebraic_expression')
/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/statistics/formula/formulae.py:docstring of nipy.algorithms.statistics.formula.formulae.terms:13: WARNING: Inline literal start-string without end-string.
/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/statistics/models/family/family.py:docstring of nipy.algorithms.statistics.models.family.family.Family:8: WARNING: Unexpected indentation.
/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/statistics/models/glm.py:docstring of nipy.algorithms.statistics.models.glm:2: WARNING: Title underline too short.
General linear models
--------------------
/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/statistics/models/model.py:docstring of nipy.algorithms.statistics.models.model.LikelihoodModelResults.conf_int:36: WARNING: Unexpected indentation.
/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/statistics/models/regression.py:docstring of nipy.algorithms.statistics.models.regression.RegressionResults.conf_int:36: WARNING: Unexpected indentation.
/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/statistics/rft.py:docstring of nipy.algorithms.statistics.rft.binomial:5: WARNING: Block quote ends without a blank line; unexpected unindent.
/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/utils/matrices.py:docstring of nipy.algorithms.utils.matrices.matrix_rank:52: WARNING: Explicit markup ends without a blank line; unexpected unindent.
/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/utils/matrices.py:docstring of nipy.algorithms.utils.matrices.recipr0:2: WARNING: Inline interpreted text or phrase reference start-string without end-string.
/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/utils/matrices.py:docstring of nipy.algorithms.utils.matrices.matrix_rank:37: WARNING: Too many autonumbered footnote references: only 0 corresponding footnotes available.
/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/utils/matrices.py:docstring of nipy.algorithms.utils.matrices.matrix_rank:37: WARNING: Unknown target name: "2".
/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/utils/matrices.py:docstring of nipy.algorithms.utils.matrices.matrix_rank:51: WARNING: Unknown target name: "computations".
/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/utils/pca.py:docstring of nipy.algorithms.utils.pca.pca:54: WARNING: Block quote ends without a blank line; unexpected unindent.
/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/utils/pca.py:docstring of nipy.algorithms.utils.pca.pca_image:55: WARNING: Block quote ends without a blank line; unexpected unindent.
/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/utils/pca.py:docstring of nipy.algorithms.utils.pca.pca_image:60: WARNING: Unexpected indentation.
/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/utils/pca.py:docstring of nipy.algorithms.utils.pca.pca_image:61: WARNING: Block quote ends without a blank line; unexpected unindent.
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/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/core/reference/coordinate_map.py:docstring of nipy.core.reference.coordinate_map.CoordinateMap:63: WARNING: Inline emphasis start-string without end-string.
/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/core/reference/coordinate_map.py:docstring of nipy.core.reference.coordinate_map.CoordinateMap:66: WARNING: Inline emphasis start-string without end-string.
/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/group/permutation_test.py:docstring of nipy.labs.group.permutation_test.permutation_test.calibrate:13: WARNING: Inline emphasis start-string without end-string.
/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/group/permutation_test.py:docstring of nipy.labs.group.permutation_test.permutation_test_onesample.__init__:5: WARNING: Unexpected indentation.
/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/group/permutation_test.py:docstring of nipy.labs.group.permutation_test.permutation_test_onesample.__init__:11: WARNING: Definition list ends without a blank line; unexpected unindent.
/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/group/permutation_test.py:docstring of nipy.labs.group.permutation_test.permutation_test_onesample.__init__:14: WARNING: Block quote ends without a blank line; unexpected unindent.
/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/group/permutation_test.py:docstring of nipy.labs.group.permutation_test.permutation_test_onesample.__init__:17: WARNING: Unexpected indentation.
/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/group/permutation_test.py:docstring of nipy.labs.group.permutation_test.permutation_test_onesample.calibrate:13: WARNING: Inline emphasis start-string without end-string.
/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/group/permutation_test.py:docstring of nipy.labs.group.permutation_test.permutation_test_onesample_graph.__init__:5: WARNING: Unexpected indentation.
/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/group/permutation_test.py:docstring of nipy.labs.group.permutation_test.permutation_test_onesample_graph.__init__:8: WARNING: Unexpected indentation.
/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/group/permutation_test.py:docstring of nipy.labs.group.permutation_test.permutation_test_onesample_graph.__init__:9: WARNING: Block quote ends without a blank line; unexpected unindent.
/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/group/permutation_test.py:docstring of nipy.labs.group.permutation_test.permutation_test_onesample_graph.__init__:11: WARNING: Definition list ends without a blank line; unexpected unindent.
/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/group/permutation_test.py:docstring of nipy.labs.group.permutation_test.permutation_test_onesample_graph.__init__:14: WARNING: Block quote ends without a blank line; unexpected unindent.
/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/group/permutation_test.py:docstring of nipy.labs.group.permutation_test.permutation_test_onesample_graph.__init__:17: WARNING: Unexpected indentation.
/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/group/permutation_test.py:docstring of nipy.labs.group.permutation_test.permutation_test_onesample_graph.calibrate:13: WARNING: Inline emphasis start-string without end-string.
/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/group/permutation_test.py:docstring of nipy.labs.group.permutation_test.permutation_test_twosample.__init__:5: WARNING: Unexpected indentation.
/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/group/permutation_test.py:docstring of nipy.labs.group.permutation_test.permutation_test_twosample.__init__:11: WARNING: Definition list ends without a blank line; unexpected unindent.
/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/group/permutation_test.py:docstring of nipy.labs.group.permutation_test.permutation_test_twosample.__init__:13: WARNING: Block quote ends without a blank line; unexpected unindent.
/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/group/permutation_test.py:docstring of nipy.labs.group.permutation_test.permutation_test_twosample.__init__:16: WARNING: Unexpected indentation.
/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/group/permutation_test.py:docstring of nipy.labs.group.permutation_test.permutation_test_twosample.calibrate:13: WARNING: Inline emphasis start-string without end-string.
/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/group/permutation_test.py:docstring of nipy.labs.group.permutation_test.compute_cluster_stats:6: WARNING: Unexpected indentation.
/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/group/permutation_test.py:docstring of nipy.labs.group.permutation_test.extract_clusters_from_diam:6: WARNING: Unexpected indentation.
/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/group/permutation_test.py:docstring of nipy.labs.group.permutation_test.extract_clusters_from_diam:10: WARNING: Block quote ends without a blank line; unexpected unindent.
/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/group/permutation_test.py:docstring of nipy.labs.group.permutation_test.extract_clusters_from_thresh:5: WARNING: Unexpected indentation.
/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/group/permutation_test.py:docstring of nipy.labs.group.permutation_test.extract_clusters_from_thresh:8: WARNING: Block quote ends without a blank line; unexpected unindent.
/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/group/permutation_test.py:docstring of nipy.labs.group.permutation_test.max_dist:4: WARNING: Unexpected indentation.
/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/group/permutation_test.py:docstring of nipy.labs.group.permutation_test.max_dist:6: WARNING: Block quote ends without a blank line; unexpected unindent.
/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/spatial_models/bsa_io.py:docstring of nipy.labs.spatial_models.bsa_io.make_bsa_image:29: WARNING: Block quote ends without a blank line; unexpected unindent.
/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/spatial_models/discrete_domain.py:docstring of nipy.labs.spatial_models.discrete_domain.NDGridDomain:5: WARNING: Unexpected indentation.
/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/spatial_models/discrete_domain.py:docstring of nipy.labs.spatial_models.discrete_domain.NDGridDomain:6: WARNING: Block quote ends without a blank line; unexpected unindent.
/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/spatial_models/discrete_domain.py:docstring of nipy.labs.spatial_models.discrete_domain.NDGridDomain.__init__:38: WARNING: Undefined substitution referenced: "det(affine)".
/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/spatial_models/hroi.py:docstring of nipy.labs.spatial_models.hroi.HierarchicalROI.get_coord:16: WARNING: Definition list ends without a blank line; unexpected unindent.
/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/spatial_models/hroi.py:docstring of nipy.labs.spatial_models.hroi.HierarchicalROI.get_feature:19: WARNING: Definition list ends without a blank line; unexpected unindent.
/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/spatial_models/hroi.py:docstring of nipy.labs.spatial_models.hroi.HierarchicalROI.get_local_volume:16: WARNING: Definition list ends without a blank line; unexpected unindent.
/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/spatial_models/hroi.py:docstring of nipy.labs.spatial_models.hroi.HierarchicalROI.get_size:21: WARNING: Definition list ends without a blank line; unexpected unindent.
/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/spatial_models/hroi.py:docstring of nipy.labs.spatial_models.hroi.HierarchicalROI.get_volume:21: WARNING: Definition list ends without a blank line; unexpected unindent.
/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/spatial_models/mroi.py:docstring of nipy.labs.spatial_models.mroi.SubDomains.get_coord:16: WARNING: Definition list ends without a blank line; unexpected unindent.
/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/spatial_models/mroi.py:docstring of nipy.labs.spatial_models.mroi.SubDomains.get_feature:19: WARNING: Definition list ends without a blank line; unexpected unindent.
/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/spatial_models/mroi.py:docstring of nipy.labs.spatial_models.mroi.SubDomains.get_local_volume:16: WARNING: Definition list ends without a blank line; unexpected unindent.
/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/spatial_models/mroi.py:docstring of nipy.labs.spatial_models.mroi.SubDomains.get_size:16: WARNING: Definition list ends without a blank line; unexpected unindent.
/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/spatial_models/mroi.py:docstring of nipy.labs.spatial_models.mroi.SubDomains.get_volume:16: WARNING: Definition list ends without a blank line; unexpected unindent.
/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/spatial_models/parcellation.py:docstring of nipy.labs.spatial_models.parcellation.MultiSubjectParcellation.set_feature:12: WARNING: Block quote ends without a blank line; unexpected unindent.
/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/statistical_mapping.py:docstring of nipy.labs.statistical_mapping.cluster_stats:34: WARNING: Inline substitution_reference start-string without end-string.
/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/utils/reproducibility_measures.py:docstring of nipy.labs.utils.reproducibility_measures.draw_samples:16: WARNING: Unexpected indentation.
/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/utils/reproducibility_measures.py:docstring of nipy.labs.utils.reproducibility_measures.draw_samples:17: WARNING: Block quote ends without a blank line; unexpected unindent.
WARNING: autodoc: failed to import module 'design' from module 'nipy.modalities.fmri'; the following exception was raised:
Traceback (most recent call last):
File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/importer.py", line 66, in import_module
return importlib.import_module(modname)
File "/usr/lib/python3.9/importlib/__init__.py", line 127, in import_module
return _bootstrap._gcd_import(name[level:], package, level)
File "<frozen importlib._bootstrap>", line 1030, in _gcd_import
File "<frozen importlib._bootstrap>", line 1007, in _find_and_load
File "<frozen importlib._bootstrap>", line 986, in _find_and_load_unlocked
File "<frozen importlib._bootstrap>", line 680, in _load_unlocked
File "<frozen importlib._bootstrap_external>", line 790, in exec_module
File "<frozen importlib._bootstrap>", line 228, in _call_with_frames_removed
File "/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/modalities/fmri/design.py", line 20, in <module>
from .hrf import glover
File "/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/modalities/fmri/hrf.py", line 123, in <module>
_gexpr = gamma_expr(5.4, 5.2) - 0.35 * gamma_expr(10.8, 7.35)
File "/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/modalities/fmri/hrf.py", line 106, in gamma_expr
coef * ((T >= 0) * (T+1.0e-14))**(shape-1)
TypeError: unsupported operand type(s) for *: 'GreaterThan' and 'Add'
WARNING: autodoc: failed to import function 'design.block_amplitudes' from module 'nipy.modalities.fmri'; the following exception was raised:
Traceback (most recent call last):
File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/importer.py", line 66, in import_module
return importlib.import_module(modname)
File "/usr/lib/python3.9/importlib/__init__.py", line 127, in import_module
return _bootstrap._gcd_import(name[level:], package, level)
File "<frozen importlib._bootstrap>", line 1030, in _gcd_import
File "<frozen importlib._bootstrap>", line 1007, in _find_and_load
File "<frozen importlib._bootstrap>", line 986, in _find_and_load_unlocked
File "<frozen importlib._bootstrap>", line 680, in _load_unlocked
File "<frozen importlib._bootstrap_external>", line 790, in exec_module
File "<frozen importlib._bootstrap>", line 228, in _call_with_frames_removed
File "/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/modalities/fmri/design.py", line 20, in <module>
from .hrf import glover
File "/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/modalities/fmri/hrf.py", line 123, in <module>
_gexpr = gamma_expr(5.4, 5.2) - 0.35 * gamma_expr(10.8, 7.35)
File "/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/modalities/fmri/hrf.py", line 106, in gamma_expr
coef * ((T >= 0) * (T+1.0e-14))**(shape-1)
TypeError: unsupported operand type(s) for *: 'GreaterThan' and 'Add'
WARNING: autodoc: failed to import function 'design.block_design' from module 'nipy.modalities.fmri'; the following exception was raised:
Traceback (most recent call last):
File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/importer.py", line 66, in import_module
return importlib.import_module(modname)
File "/usr/lib/python3.9/importlib/__init__.py", line 127, in import_module
return _bootstrap._gcd_import(name[level:], package, level)
File "<frozen importlib._bootstrap>", line 1030, in _gcd_import
File "<frozen importlib._bootstrap>", line 1007, in _find_and_load
File "<frozen importlib._bootstrap>", line 986, in _find_and_load_unlocked
File "<frozen importlib._bootstrap>", line 680, in _load_unlocked
File "<frozen importlib._bootstrap_external>", line 790, in exec_module
File "<frozen importlib._bootstrap>", line 228, in _call_with_frames_removed
File "/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/modalities/fmri/design.py", line 20, in <module>
from .hrf import glover
File "/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/modalities/fmri/hrf.py", line 123, in <module>
_gexpr = gamma_expr(5.4, 5.2) - 0.35 * gamma_expr(10.8, 7.35)
File "/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/modalities/fmri/hrf.py", line 106, in gamma_expr
coef * ((T >= 0) * (T+1.0e-14))**(shape-1)
TypeError: unsupported operand type(s) for *: 'GreaterThan' and 'Add'
WARNING: autodoc: failed to import function 'design.event_design' from module 'nipy.modalities.fmri'; the following exception was raised:
Traceback (most recent call last):
File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/importer.py", line 66, in import_module
return importlib.import_module(modname)
File "/usr/lib/python3.9/importlib/__init__.py", line 127, in import_module
return _bootstrap._gcd_import(name[level:], package, level)
File "<frozen importlib._bootstrap>", line 1030, in _gcd_import
File "<frozen importlib._bootstrap>", line 1007, in _find_and_load
File "<frozen importlib._bootstrap>", line 986, in _find_and_load_unlocked
File "<frozen importlib._bootstrap>", line 680, in _load_unlocked
File "<frozen importlib._bootstrap_external>", line 790, in exec_module
File "<frozen importlib._bootstrap>", line 228, in _call_with_frames_removed
File "/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/modalities/fmri/design.py", line 20, in <module>
from .hrf import glover
File "/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/modalities/fmri/hrf.py", line 123, in <module>
_gexpr = gamma_expr(5.4, 5.2) - 0.35 * gamma_expr(10.8, 7.35)
File "/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/modalities/fmri/hrf.py", line 106, in gamma_expr
coef * ((T >= 0) * (T+1.0e-14))**(shape-1)
TypeError: unsupported operand type(s) for *: 'GreaterThan' and 'Add'
WARNING: autodoc: failed to import function 'design.fourier_basis' from module 'nipy.modalities.fmri'; the following exception was raised:
Traceback (most recent call last):
File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/importer.py", line 66, in import_module
return importlib.import_module(modname)
File "/usr/lib/python3.9/importlib/__init__.py", line 127, in import_module
return _bootstrap._gcd_import(name[level:], package, level)
File "<frozen importlib._bootstrap>", line 1030, in _gcd_import
File "<frozen importlib._bootstrap>", line 1007, in _find_and_load
File "<frozen importlib._bootstrap>", line 986, in _find_and_load_unlocked
File "<frozen importlib._bootstrap>", line 680, in _load_unlocked
File "<frozen importlib._bootstrap_external>", line 790, in exec_module
File "<frozen importlib._bootstrap>", line 228, in _call_with_frames_removed
File "/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/modalities/fmri/design.py", line 20, in <module>
from .hrf import glover
File "/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/modalities/fmri/hrf.py", line 123, in <module>
_gexpr = gamma_expr(5.4, 5.2) - 0.35 * gamma_expr(10.8, 7.35)
File "/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/modalities/fmri/hrf.py", line 106, in gamma_expr
coef * ((T >= 0) * (T+1.0e-14))**(shape-1)
TypeError: unsupported operand type(s) for *: 'GreaterThan' and 'Add'
WARNING: autodoc: failed to import function 'design.natural_spline' from module 'nipy.modalities.fmri'; the following exception was raised:
Traceback (most recent call last):
File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/importer.py", line 66, in import_module
return importlib.import_module(modname)
File "/usr/lib/python3.9/importlib/__init__.py", line 127, in import_module
return _bootstrap._gcd_import(name[level:], package, level)
File "<frozen importlib._bootstrap>", line 1030, in _gcd_import
File "<frozen importlib._bootstrap>", line 1007, in _find_and_load
File "<frozen importlib._bootstrap>", line 986, in _find_and_load_unlocked
File "<frozen importlib._bootstrap>", line 680, in _load_unlocked
File "<frozen importlib._bootstrap_external>", line 790, in exec_module
File "<frozen importlib._bootstrap>", line 228, in _call_with_frames_removed
File "/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/modalities/fmri/design.py", line 20, in <module>
from .hrf import glover
File "/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/modalities/fmri/hrf.py", line 123, in <module>
_gexpr = gamma_expr(5.4, 5.2) - 0.35 * gamma_expr(10.8, 7.35)
File "/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/modalities/fmri/hrf.py", line 106, in gamma_expr
coef * ((T >= 0) * (T+1.0e-14))**(shape-1)
TypeError: unsupported operand type(s) for *: 'GreaterThan' and 'Add'
WARNING: autodoc: failed to import function 'design.openfmri2nipy' from module 'nipy.modalities.fmri'; the following exception was raised:
Traceback (most recent call last):
File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/importer.py", line 66, in import_module
return importlib.import_module(modname)
File "/usr/lib/python3.9/importlib/__init__.py", line 127, in import_module
return _bootstrap._gcd_import(name[level:], package, level)
File "<frozen importlib._bootstrap>", line 1030, in _gcd_import
File "<frozen importlib._bootstrap>", line 1007, in _find_and_load
File "<frozen importlib._bootstrap>", line 986, in _find_and_load_unlocked
File "<frozen importlib._bootstrap>", line 680, in _load_unlocked
File "<frozen importlib._bootstrap_external>", line 790, in exec_module
File "<frozen importlib._bootstrap>", line 228, in _call_with_frames_removed
File "/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/modalities/fmri/design.py", line 20, in <module>
from .hrf import glover
File "/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/modalities/fmri/hrf.py", line 123, in <module>
_gexpr = gamma_expr(5.4, 5.2) - 0.35 * gamma_expr(10.8, 7.35)
File "/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/modalities/fmri/hrf.py", line 106, in gamma_expr
coef * ((T >= 0) * (T+1.0e-14))**(shape-1)
TypeError: unsupported operand type(s) for *: 'GreaterThan' and 'Add'
WARNING: autodoc: failed to import function 'design.stack2designs' from module 'nipy.modalities.fmri'; the following exception was raised:
Traceback (most recent call last):
File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/importer.py", line 66, in import_module
return importlib.import_module(modname)
File "/usr/lib/python3.9/importlib/__init__.py", line 127, in import_module
return _bootstrap._gcd_import(name[level:], package, level)
File "<frozen importlib._bootstrap>", line 1030, in _gcd_import
File "<frozen importlib._bootstrap>", line 1007, in _find_and_load
File "<frozen importlib._bootstrap>", line 986, in _find_and_load_unlocked
File "<frozen importlib._bootstrap>", line 680, in _load_unlocked
File "<frozen importlib._bootstrap_external>", line 790, in exec_module
File "<frozen importlib._bootstrap>", line 228, in _call_with_frames_removed
File "/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/modalities/fmri/design.py", line 20, in <module>
from .hrf import glover
File "/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/modalities/fmri/hrf.py", line 123, in <module>
_gexpr = gamma_expr(5.4, 5.2) - 0.35 * gamma_expr(10.8, 7.35)
File "/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/modalities/fmri/hrf.py", line 106, in gamma_expr
coef * ((T >= 0) * (T+1.0e-14))**(shape-1)
TypeError: unsupported operand type(s) for *: 'GreaterThan' and 'Add'
WARNING: autodoc: failed to import function 'design.stack_contrasts' from module 'nipy.modalities.fmri'; the following exception was raised:
Traceback (most recent call last):
File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/importer.py", line 66, in import_module
return importlib.import_module(modname)
File "/usr/lib/python3.9/importlib/__init__.py", line 127, in import_module
return _bootstrap._gcd_import(name[level:], package, level)
File "<frozen importlib._bootstrap>", line 1030, in _gcd_import
File "<frozen importlib._bootstrap>", line 1007, in _find_and_load
File "<frozen importlib._bootstrap>", line 986, in _find_and_load_unlocked
File "<frozen importlib._bootstrap>", line 680, in _load_unlocked
File "<frozen importlib._bootstrap_external>", line 790, in exec_module
File "<frozen importlib._bootstrap>", line 228, in _call_with_frames_removed
File "/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/modalities/fmri/design.py", line 20, in <module>
from .hrf import glover
File "/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/modalities/fmri/hrf.py", line 123, in <module>
_gexpr = gamma_expr(5.4, 5.2) - 0.35 * gamma_expr(10.8, 7.35)
File "/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/modalities/fmri/hrf.py", line 106, in gamma_expr
coef * ((T >= 0) * (T+1.0e-14))**(shape-1)
TypeError: unsupported operand type(s) for *: 'GreaterThan' and 'Add'
WARNING: autodoc: failed to import function 'design.stack_designs' from module 'nipy.modalities.fmri'; the following exception was raised:
Traceback (most recent call last):
File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/importer.py", line 66, in import_module
return importlib.import_module(modname)
File "/usr/lib/python3.9/importlib/__init__.py", line 127, in import_module
return _bootstrap._gcd_import(name[level:], package, level)
File "<frozen importlib._bootstrap>", line 1030, in _gcd_import
File "<frozen importlib._bootstrap>", line 1007, in _find_and_load
File "<frozen importlib._bootstrap>", line 986, in _find_and_load_unlocked
File "<frozen importlib._bootstrap>", line 680, in _load_unlocked
File "<frozen importlib._bootstrap_external>", line 790, in exec_module
File "<frozen importlib._bootstrap>", line 228, in _call_with_frames_removed
File "/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/modalities/fmri/design.py", line 20, in <module>
from .hrf import glover
File "/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/modalities/fmri/hrf.py", line 123, in <module>
_gexpr = gamma_expr(5.4, 5.2) - 0.35 * gamma_expr(10.8, 7.35)
File "/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/modalities/fmri/hrf.py", line 106, in gamma_expr
coef * ((T >= 0) * (T+1.0e-14))**(shape-1)
TypeError: unsupported operand type(s) for *: 'GreaterThan' and 'Add'
WARNING: autodoc: failed to import module 'hrf' from module 'nipy.modalities.fmri.fmristat'; the following exception was raised:
Traceback (most recent call last):
File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/importer.py", line 66, in import_module
return importlib.import_module(modname)
File "/usr/lib/python3.9/importlib/__init__.py", line 127, in import_module
return _bootstrap._gcd_import(name[level:], package, level)
File "<frozen importlib._bootstrap>", line 1030, in _gcd_import
File "<frozen importlib._bootstrap>", line 1007, in _find_and_load
File "<frozen importlib._bootstrap>", line 986, in _find_and_load_unlocked
File "<frozen importlib._bootstrap>", line 680, in _load_unlocked
File "<frozen importlib._bootstrap_external>", line 790, in exec_module
File "<frozen importlib._bootstrap>", line 228, in _call_with_frames_removed
File "/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/modalities/fmri/fmristat/hrf.py", line 21, in <module>
from .. import hrf
File "/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/modalities/fmri/hrf.py", line 123, in <module>
_gexpr = gamma_expr(5.4, 5.2) - 0.35 * gamma_expr(10.8, 7.35)
File "/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/modalities/fmri/hrf.py", line 106, in gamma_expr
coef * ((T >= 0) * (T+1.0e-14))**(shape-1)
TypeError: unsupported operand type(s) for *: 'GreaterThan' and 'Add'
WARNING: autodoc: failed to import function 'hrf.spectral_decomposition' from module 'nipy.modalities.fmri.fmristat'; the following exception was raised:
Traceback (most recent call last):
File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/importer.py", line 66, in import_module
return importlib.import_module(modname)
File "/usr/lib/python3.9/importlib/__init__.py", line 127, in import_module
return _bootstrap._gcd_import(name[level:], package, level)
File "<frozen importlib._bootstrap>", line 1030, in _gcd_import
File "<frozen importlib._bootstrap>", line 1007, in _find_and_load
File "<frozen importlib._bootstrap>", line 986, in _find_and_load_unlocked
File "<frozen importlib._bootstrap>", line 680, in _load_unlocked
File "<frozen importlib._bootstrap_external>", line 790, in exec_module
File "<frozen importlib._bootstrap>", line 228, in _call_with_frames_removed
File "/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/modalities/fmri/fmristat/hrf.py", line 21, in <module>
from .. import hrf
File "/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/modalities/fmri/hrf.py", line 123, in <module>
_gexpr = gamma_expr(5.4, 5.2) - 0.35 * gamma_expr(10.8, 7.35)
File "/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/modalities/fmri/hrf.py", line 106, in gamma_expr
coef * ((T >= 0) * (T+1.0e-14))**(shape-1)
TypeError: unsupported operand type(s) for *: 'GreaterThan' and 'Add'
WARNING: autodoc: failed to import function 'hrf.taylor_approx' from module 'nipy.modalities.fmri.fmristat'; the following exception was raised:
Traceback (most recent call last):
File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/importer.py", line 66, in import_module
return importlib.import_module(modname)
File "/usr/lib/python3.9/importlib/__init__.py", line 127, in import_module
return _bootstrap._gcd_import(name[level:], package, level)
File "<frozen importlib._bootstrap>", line 1030, in _gcd_import
File "<frozen importlib._bootstrap>", line 1007, in _find_and_load
File "<frozen importlib._bootstrap>", line 986, in _find_and_load_unlocked
File "<frozen importlib._bootstrap>", line 680, in _load_unlocked
File "<frozen importlib._bootstrap_external>", line 790, in exec_module
File "<frozen importlib._bootstrap>", line 228, in _call_with_frames_removed
File "/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/modalities/fmri/fmristat/hrf.py", line 21, in <module>
from .. import hrf
File "/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/modalities/fmri/hrf.py", line 123, in <module>
_gexpr = gamma_expr(5.4, 5.2) - 0.35 * gamma_expr(10.8, 7.35)
File "/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/modalities/fmri/hrf.py", line 106, in gamma_expr
coef * ((T >= 0) * (T+1.0e-14))**(shape-1)
TypeError: unsupported operand type(s) for *: 'GreaterThan' and 'Add'
/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/modalities/fmri/hemodynamic_models.py:docstring of nipy.modalities.fmri.hemodynamic_models.compute_regressor:54: WARNING: Unexpected indentation.
/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/modalities/fmri/hemodynamic_models.py:docstring of nipy.modalities.fmri.hemodynamic_models.compute_regressor:56: WARNING: Block quote ends without a blank line; unexpected unindent.
WARNING: autodoc: failed to import module 'hrf' from module 'nipy.modalities.fmri'; the following exception was raised:
Traceback (most recent call last):
File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/importer.py", line 66, in import_module
return importlib.import_module(modname)
File "/usr/lib/python3.9/importlib/__init__.py", line 127, in import_module
return _bootstrap._gcd_import(name[level:], package, level)
File "<frozen importlib._bootstrap>", line 1030, in _gcd_import
File "<frozen importlib._bootstrap>", line 1007, in _find_and_load
File "<frozen importlib._bootstrap>", line 986, in _find_and_load_unlocked
File "<frozen importlib._bootstrap>", line 680, in _load_unlocked
File "<frozen importlib._bootstrap_external>", line 790, in exec_module
File "<frozen importlib._bootstrap>", line 228, in _call_with_frames_removed
File "/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/modalities/fmri/hrf.py", line 123, in <module>
_gexpr = gamma_expr(5.4, 5.2) - 0.35 * gamma_expr(10.8, 7.35)
File "/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/modalities/fmri/hrf.py", line 106, in gamma_expr
coef * ((T >= 0) * (T+1.0e-14))**(shape-1)
TypeError: unsupported operand type(s) for *: 'GreaterThan' and 'Add'
WARNING: autodoc: failed to import function 'hrf.ddspmt' from module 'nipy.modalities.fmri'; the following exception was raised:
Traceback (most recent call last):
File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/importer.py", line 66, in import_module
return importlib.import_module(modname)
File "/usr/lib/python3.9/importlib/__init__.py", line 127, in import_module
return _bootstrap._gcd_import(name[level:], package, level)
File "<frozen importlib._bootstrap>", line 1030, in _gcd_import
File "<frozen importlib._bootstrap>", line 1007, in _find_and_load
File "<frozen importlib._bootstrap>", line 986, in _find_and_load_unlocked
File "<frozen importlib._bootstrap>", line 680, in _load_unlocked
File "<frozen importlib._bootstrap_external>", line 790, in exec_module
File "<frozen importlib._bootstrap>", line 228, in _call_with_frames_removed
File "/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/modalities/fmri/hrf.py", line 123, in <module>
_gexpr = gamma_expr(5.4, 5.2) - 0.35 * gamma_expr(10.8, 7.35)
File "/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/modalities/fmri/hrf.py", line 106, in gamma_expr
coef * ((T >= 0) * (T+1.0e-14))**(shape-1)
TypeError: unsupported operand type(s) for *: 'GreaterThan' and 'Add'
WARNING: autodoc: failed to import function 'hrf.dspmt' from module 'nipy.modalities.fmri'; the following exception was raised:
Traceback (most recent call last):
File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/importer.py", line 66, in import_module
return importlib.import_module(modname)
File "/usr/lib/python3.9/importlib/__init__.py", line 127, in import_module
return _bootstrap._gcd_import(name[level:], package, level)
File "<frozen importlib._bootstrap>", line 1030, in _gcd_import
File "<frozen importlib._bootstrap>", line 1007, in _find_and_load
File "<frozen importlib._bootstrap>", line 986, in _find_and_load_unlocked
File "<frozen importlib._bootstrap>", line 680, in _load_unlocked
File "<frozen importlib._bootstrap_external>", line 790, in exec_module
File "<frozen importlib._bootstrap>", line 228, in _call_with_frames_removed
File "/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/modalities/fmri/hrf.py", line 123, in <module>
_gexpr = gamma_expr(5.4, 5.2) - 0.35 * gamma_expr(10.8, 7.35)
File "/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/modalities/fmri/hrf.py", line 106, in gamma_expr
coef * ((T >= 0) * (T+1.0e-14))**(shape-1)
TypeError: unsupported operand type(s) for *: 'GreaterThan' and 'Add'
WARNING: autodoc: failed to import function 'hrf.gamma_expr' from module 'nipy.modalities.fmri'; the following exception was raised:
Traceback (most recent call last):
File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/importer.py", line 66, in import_module
return importlib.import_module(modname)
File "/usr/lib/python3.9/importlib/__init__.py", line 127, in import_module
return _bootstrap._gcd_import(name[level:], package, level)
File "<frozen importlib._bootstrap>", line 1030, in _gcd_import
File "<frozen importlib._bootstrap>", line 1007, in _find_and_load
File "<frozen importlib._bootstrap>", line 986, in _find_and_load_unlocked
File "<frozen importlib._bootstrap>", line 680, in _load_unlocked
File "<frozen importlib._bootstrap_external>", line 790, in exec_module
File "<frozen importlib._bootstrap>", line 228, in _call_with_frames_removed
File "/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/modalities/fmri/hrf.py", line 123, in <module>
_gexpr = gamma_expr(5.4, 5.2) - 0.35 * gamma_expr(10.8, 7.35)
File "/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/modalities/fmri/hrf.py", line 106, in gamma_expr
coef * ((T >= 0) * (T+1.0e-14))**(shape-1)
TypeError: unsupported operand type(s) for *: 'GreaterThan' and 'Add'
WARNING: autodoc: failed to import function 'hrf.gamma_params' from module 'nipy.modalities.fmri'; the following exception was raised:
Traceback (most recent call last):
File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/importer.py", line 66, in import_module
return importlib.import_module(modname)
File "/usr/lib/python3.9/importlib/__init__.py", line 127, in import_module
return _bootstrap._gcd_import(name[level:], package, level)
File "<frozen importlib._bootstrap>", line 1030, in _gcd_import
File "<frozen importlib._bootstrap>", line 1007, in _find_and_load
File "<frozen importlib._bootstrap>", line 986, in _find_and_load_unlocked
File "<frozen importlib._bootstrap>", line 680, in _load_unlocked
File "<frozen importlib._bootstrap_external>", line 790, in exec_module
File "<frozen importlib._bootstrap>", line 228, in _call_with_frames_removed
File "/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/modalities/fmri/hrf.py", line 123, in <module>
_gexpr = gamma_expr(5.4, 5.2) - 0.35 * gamma_expr(10.8, 7.35)
File "/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/modalities/fmri/hrf.py", line 106, in gamma_expr
coef * ((T >= 0) * (T+1.0e-14))**(shape-1)
TypeError: unsupported operand type(s) for *: 'GreaterThan' and 'Add'
WARNING: autodoc: failed to import function 'hrf.spm_hrf_compat' from module 'nipy.modalities.fmri'; the following exception was raised:
Traceback (most recent call last):
File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/importer.py", line 66, in import_module
return importlib.import_module(modname)
File "/usr/lib/python3.9/importlib/__init__.py", line 127, in import_module
return _bootstrap._gcd_import(name[level:], package, level)
File "<frozen importlib._bootstrap>", line 1030, in _gcd_import
File "<frozen importlib._bootstrap>", line 1007, in _find_and_load
File "<frozen importlib._bootstrap>", line 986, in _find_and_load_unlocked
File "<frozen importlib._bootstrap>", line 680, in _load_unlocked
File "<frozen importlib._bootstrap_external>", line 790, in exec_module
File "<frozen importlib._bootstrap>", line 228, in _call_with_frames_removed
File "/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/modalities/fmri/hrf.py", line 123, in <module>
_gexpr = gamma_expr(5.4, 5.2) - 0.35 * gamma_expr(10.8, 7.35)
File "/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/modalities/fmri/hrf.py", line 106, in gamma_expr
coef * ((T >= 0) * (T+1.0e-14))**(shape-1)
TypeError: unsupported operand type(s) for *: 'GreaterThan' and 'Add'
WARNING: autodoc: failed to import function 'hrf.spmt' from module 'nipy.modalities.fmri'; the following exception was raised:
Traceback (most recent call last):
File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/importer.py", line 66, in import_module
return importlib.import_module(modname)
File "/usr/lib/python3.9/importlib/__init__.py", line 127, in import_module
return _bootstrap._gcd_import(name[level:], package, level)
File "<frozen importlib._bootstrap>", line 1030, in _gcd_import
File "<frozen importlib._bootstrap>", line 1007, in _find_and_load
File "<frozen importlib._bootstrap>", line 986, in _find_and_load_unlocked
File "<frozen importlib._bootstrap>", line 680, in _load_unlocked
File "<frozen importlib._bootstrap_external>", line 790, in exec_module
File "<frozen importlib._bootstrap>", line 228, in _call_with_frames_removed
File "/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/modalities/fmri/hrf.py", line 123, in <module>
_gexpr = gamma_expr(5.4, 5.2) - 0.35 * gamma_expr(10.8, 7.35)
File "/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/modalities/fmri/hrf.py", line 106, in gamma_expr
coef * ((T >= 0) * (T+1.0e-14))**(shape-1)
TypeError: unsupported operand type(s) for *: 'GreaterThan' and 'Add'
/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/modalities/fmri/spm/reml.py:docstring of nipy.modalities.fmri.spm.reml.reml:9: WARNING: Unexpected indentation.
/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/modalities/fmri/spm/reml.py:docstring of nipy.modalities.fmri.spm.reml.reml:10: WARNING: Block quote ends without a blank line; unexpected unindent.
/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/modalities/fmri/spm/reml.py:docstring of nipy.modalities.fmri.spm.reml.reml:12: WARNING: Definition list ends without a blank line; unexpected unindent.
/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/modalities/fmri/spm/reml.py:docstring of nipy.modalities.fmri.spm.reml.reml:14: WARNING: Unexpected indentation.
/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/modalities/fmri/spm/reml.py:docstring of nipy.modalities.fmri.spm.reml.reml:17: WARNING: Block quote ends without a blank line; unexpected unindent.
/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/modalities/fmri/spm/reml.py:docstring of nipy.modalities.fmri.spm.reml.reml:24: WARNING: Unexpected indentation.
/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/modalities/fmri/spm/reml.py:docstring of nipy.modalities.fmri.spm.reml.reml:25: WARNING: Block quote ends without a blank line; unexpected unindent.
/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/testing/nosetester.py:docstring of nipy.testing.nosetester.NipyNoseTester.bench:12: WARNING: Unexpected indentation.
/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/testing/nosetester.py:docstring of nipy.testing.nosetester.NipyNoseTester.bench:13: WARNING: Block quote ends without a blank line; unexpected unindent.
/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/testing/nosetester.py:docstring of nipy.testing.nosetester.NipyNoseTester.bench:16: WARNING: Bullet list ends without a blank line; unexpected unindent.
/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/testing/nosetester.py:docstring of nipy.testing.nosetester.NipyNoseTester.test:32: WARNING: Unexpected indentation.
/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/testing/nosetester.py:docstring of nipy.testing.nosetester.NipyNoseTester.test:30: WARNING: Inline interpreted text or phrase reference start-string without end-string.
/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/utils/utilities.py:docstring of nipy.utils.utilities.seq_prod:16: WARNING: Inline literal start-string without end-string.
/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/utils/utilities.py:docstring of nipy.utils.utilities.seq_prod:16: WARNING: Inline literal start-string without end-string.
devel/guidelines/gitwash/this_project.inc:2: WARNING: Duplicate explicit target name: "nipy".
devel/guidelines/gitwash/this_project.inc:2: WARNING: Duplicate explicit target name: "nipy".
/build/nipy-0.4.3~rc1/doc/devel/guidelines/gitwash/development_workflow.rst:9: WARNING: Duplicate target name, cannot be used as a unique reference: "nipy".
/build/nipy-0.4.3~rc1/doc/devel/guidelines/gitwash/development_workflow.rst:85: WARNING: Duplicate target name, cannot be used as a unique reference: "nipy".
devel/guidelines/gitwash/this_project.inc:2: WARNING: Duplicate explicit target name: "nipy".
devel/guidelines/gitwash/this_project.inc:2: WARNING: Duplicate explicit target name: "nipy".
/build/nipy-0.4.3~rc1/doc/devel/guidelines/gitwash/forking_hell.rst:9: WARNING: Duplicate target name, cannot be used as a unique reference: "nipy".
/build/nipy-0.4.3~rc1/doc/devel/guidelines/gitwash/forking_hell.rst:23: WARNING: Duplicate target name, cannot be used as a unique reference: "nipy".
/build/nipy-0.4.3~rc1/doc/devel/guidelines/gitwash/forking_hell.rst:26: WARNING: Duplicate target name, cannot be used as a unique reference: "nipy".
/build/nipy-0.4.3~rc1/doc/devel/guidelines/gitwash/forking_hell.rst:31: WARNING: Duplicate target name, cannot be used as a unique reference: "nipy".
devel/guidelines/gitwash/this_project.inc:2: WARNING: Duplicate explicit target name: "nipy".
devel/guidelines/gitwash/this_project.inc:2: WARNING: Duplicate explicit target name: "nipy".
/build/nipy-0.4.3~rc1/doc/devel/guidelines/gitwash/git_intro.rst:7: WARNING: Duplicate target name, cannot be used as a unique reference: "nipy".
devel/guidelines/gitwash/this_project.inc:2: WARNING: Duplicate explicit target name: "nipy".
devel/guidelines/gitwash/this_project.inc:2: WARNING: Duplicate explicit target name: "nipy".
devel/guidelines/gitwash/this_project.inc:2: WARNING: Duplicate explicit target name: "nipy".
/build/nipy-0.4.3~rc1/doc/devel/guidelines/gitwash/patching.rst:7: WARNING: Duplicate target name, cannot be used as a unique reference: "nipy".
/build/nipy-0.4.3~rc1/doc/devel/guidelines/gitwash/patching.rst:61: WARNING: Duplicate target name, cannot be used as a unique reference: "nipy".
/build/nipy-0.4.3~rc1/doc/devel/guidelines/gitwash/patching.rst:122: WARNING: Duplicate target name, cannot be used as a unique reference: "nipy".
devel/guidelines/gitwash/this_project.inc:2: WARNING: Duplicate explicit target name: "nipy".
/build/nipy-0.4.3~rc1/doc/devel/guidelines/gitwash/set_up_fork.rst:55: WARNING: Duplicate target name, cannot be used as a unique reference: "nipy".
links_names.txt:164: WARNING: Duplicate explicit target name: "travis-ci".
/build/nipy-0.4.3~rc1/doc/devel/guidelines/make_release.rst:119: WARNING: Duplicate target name, cannot be used as a unique reference: "travis-ci".
links_names.txt:108: WARNING: Duplicate explicit target name: "pythonxy".
/build/nipy-0.4.3~rc1/doc/devel/guidelines/testing.rst:17: WARNING: Undefined substitution referenced: "--".
/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/statistics/empirical_pvalue.py:docstring of nipy.algorithms.statistics.empirical_pvalue.NormalEmpiricalNull:1: WARNING: duplicate object description of nipy.algorithms.statistics.empirical_pvalue.NormalEmpiricalNull, other instance in api/generated/nipy.algorithms.statistics.empirical_pvalue, use :noindex: for one of them
/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/statistics/empirical_pvalue.py:docstring of nipy.algorithms.statistics.empirical_pvalue.NormalEmpiricalNull.__init__:1: WARNING: duplicate object description of nipy.algorithms.statistics.empirical_pvalue.NormalEmpiricalNull.__init__, other instance in api/generated/nipy.algorithms.statistics.empirical_pvalue, use :noindex: for one of them
/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/statistics/empirical_pvalue.py:docstring of nipy.algorithms.statistics.empirical_pvalue.NormalEmpiricalNull.fdr:1: WARNING: duplicate object description of nipy.algorithms.statistics.empirical_pvalue.NormalEmpiricalNull.fdr, other instance in api/generated/nipy.algorithms.statistics.empirical_pvalue, use :noindex: for one of them
/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/statistics/empirical_pvalue.py:docstring of nipy.algorithms.statistics.empirical_pvalue.NormalEmpiricalNull.fdrcurve:1: WARNING: duplicate object description of nipy.algorithms.statistics.empirical_pvalue.NormalEmpiricalNull.fdrcurve, other instance in api/generated/nipy.algorithms.statistics.empirical_pvalue, use :noindex: for one of them
/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/statistics/empirical_pvalue.py:docstring of nipy.algorithms.statistics.empirical_pvalue.NormalEmpiricalNull.learn:1: WARNING: duplicate object description of nipy.algorithms.statistics.empirical_pvalue.NormalEmpiricalNull.learn, other instance in api/generated/nipy.algorithms.statistics.empirical_pvalue, use :noindex: for one of them
/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/statistics/empirical_pvalue.py:docstring of nipy.algorithms.statistics.empirical_pvalue.NormalEmpiricalNull.plot:1: WARNING: duplicate object description of nipy.algorithms.statistics.empirical_pvalue.NormalEmpiricalNull.plot, other instance in api/generated/nipy.algorithms.statistics.empirical_pvalue, use :noindex: for one of them
/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/statistics/empirical_pvalue.py:docstring of nipy.algorithms.statistics.empirical_pvalue.NormalEmpiricalNull.threshold:1: WARNING: duplicate object description of nipy.algorithms.statistics.empirical_pvalue.NormalEmpiricalNull.threshold, other instance in api/generated/nipy.algorithms.statistics.empirical_pvalue, use :noindex: for one of them
/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/algorithms/statistics/empirical_pvalue.py:docstring of nipy.algorithms.statistics.empirical_pvalue.NormalEmpiricalNull.uncorrected_threshold:1: WARNING: duplicate object description of nipy.algorithms.statistics.empirical_pvalue.NormalEmpiricalNull.uncorrected_threshold, other instance in api/generated/nipy.algorithms.statistics.empirical_pvalue, use :noindex: for one of them
/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/datasets/volumes/volume_field.py:docstring of nipy.labs.datasets.volumes.volume_field.VolumeField.as_volume_img:1: WARNING: duplicate object description of nipy.labs.datasets.volumes.volume_field.VolumeField.as_volume_img, other instance in api/generated/nipy.labs.datasets.volumes.volume_field, use :noindex: for one of them
/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/datasets/volumes/volume_field.py:docstring of nipy.labs.datasets.volumes.volume_field.VolumeField.composed_with_transform:1: WARNING: duplicate object description of nipy.labs.datasets.volumes.volume_field.VolumeField.composed_with_transform, other instance in api/generated/nipy.labs.datasets.volumes.volume_field, use :noindex: for one of them
/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/datasets/volumes/volume_field.py:docstring of nipy.labs.datasets.volumes.volume_field.VolumeField.resampled_to_img:1: WARNING: duplicate object description of nipy.labs.datasets.volumes.volume_field.VolumeField.resampled_to_img, other instance in api/generated/nipy.labs.datasets.volumes.volume_field, use :noindex: for one of them
/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/datasets/volumes/volume_field.py:docstring of nipy.labs.datasets.volumes.volume_field.VolumeField.values_in_world:1: WARNING: duplicate object description of nipy.labs.datasets.volumes.volume_field.VolumeField.values_in_world, other instance in api/generated/nipy.labs.datasets.volumes.volume_field, use :noindex: for one of them
/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/viz_tools/activation_maps.py:docstring of nipy.labs.viz_tools.activation_maps.plot_map:1: WARNING: duplicate object description of nipy.labs.viz_tools.activation_maps.plot_map, other instance in api/generated/nipy.labs.viz_tools.activation_maps, use :noindex: for one of them
/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/viz_tools/maps_3d.py:docstring of nipy.labs.viz_tools.maps_3d.affine_img_src:1: WARNING: duplicate object description of nipy.labs.viz_tools.maps_3d.affine_img_src, other instance in api/generated/nipy.labs.viz_tools.maps_3d, use :noindex: for one of them
/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/viz_tools/maps_3d.py:docstring of nipy.labs.viz_tools.maps_3d.plot_anat_3d:1: WARNING: duplicate object description of nipy.labs.viz_tools.maps_3d.plot_anat_3d, other instance in api/generated/nipy.labs.viz_tools.maps_3d, use :noindex: for one of them
/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/viz_tools/maps_3d.py:docstring of nipy.labs.viz_tools.maps_3d.plot_map_3d:1: WARNING: duplicate object description of nipy.labs.viz_tools.maps_3d.plot_map_3d, other instance in api/generated/nipy.labs.viz_tools.maps_3d, use :noindex: for one of them
/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/utils/simul_multisubject_fmri_dataset.py:docstring of nipy.labs.utils.simul_multisubject_fmri_dataset.surrogate_2d_dataset:1: WARNING: duplicate object description of nipy.labs.utils.simul_multisubject_fmri_dataset.surrogate_2d_dataset, other instance in api/generated/nipy.labs.utils.simul_multisubject_fmri_dataset, use :noindex: for one of them
/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/utils/simul_multisubject_fmri_dataset.py:docstring of nipy.labs.utils.simul_multisubject_fmri_dataset.surrogate_3d_dataset:1: WARNING: duplicate object description of nipy.labs.utils.simul_multisubject_fmri_dataset.surrogate_3d_dataset, other instance in api/generated/nipy.labs.utils.simul_multisubject_fmri_dataset, use :noindex: for one of them
/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/labs/utils/simul_multisubject_fmri_dataset.py:docstring of nipy.labs.utils.simul_multisubject_fmri_dataset.surrogate_4d_dataset:1: WARNING: duplicate object description of nipy.labs.utils.simul_multisubject_fmri_dataset.surrogate_4d_dataset, other instance in api/generated/nipy.labs.utils.simul_multisubject_fmri_dataset, use :noindex: for one of them
/build/nipy-0.4.3~rc1/doc/users/glm_spec.rst:271: WARNING: Exception occurred in plotting neuronal_event
from /build/nipy-0.4.3~rc1/doc/users/plots/neuronal_event.py:
Traceback (most recent call last):
File "/usr/lib/python3/dist-packages/matplotlib/sphinxext/plot_directive.py", line 472, in run_code
exec(code, ns)
File "<string>", line 26, in <module>
File "<string>", line 26, in <listcomp>
File "<lambdifygenerated-1>", line 2, in _lambdifygenerated
return (Heaviside(t) - 2*Heaviside(t - 18) + Heaviside(t - 16) - 2*Heaviside(t - 14) + Heaviside(t - 12) - 2*Heaviside(t - 10) + Heaviside(t - 8) - 2*Heaviside(t - 6) + Heaviside(t - 4) - 2*Heaviside(t - 2))
NameError: name 'Heaviside' is not defined
/build/nipy-0.4.3~rc1/doc/users/glm_spec.rst:410: WARNING: Exception occurred in plotting hrf
from /build/nipy-0.4.3~rc1/doc/users/plots/hrf.py:
Traceback (most recent call last):
File "/usr/lib/python3/dist-packages/matplotlib/sphinxext/plot_directive.py", line 472, in run_code
exec(code, ns)
File "<string>", line 9, in <module>
File "/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/modalities/fmri/hrf.py", line 123, in <module>
_gexpr = gamma_expr(5.4, 5.2) - 0.35 * gamma_expr(10.8, 7.35)
File "/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/modalities/fmri/hrf.py", line 106, in gamma_expr
coef * ((T >= 0) * (T+1.0e-14))**(shape-1)
TypeError: unsupported operand type(s) for *: 'GreaterThan' and 'Add'
/build/nipy-0.4.3~rc1/doc/users/glm_spec.rst:456: WARNING: Exception occurred in plotting hrf_different
from /build/nipy-0.4.3~rc1/doc/users/plots/hrf_different.py:
Traceback (most recent call last):
File "/usr/lib/python3/dist-packages/matplotlib/sphinxext/plot_directive.py", line 472, in run_code
exec(code, ns)
File "<string>", line 11, in <module>
File "/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/modalities/fmri/hrf.py", line 123, in <module>
_gexpr = gamma_expr(5.4, 5.2) - 0.35 * gamma_expr(10.8, 7.35)
File "/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/modalities/fmri/hrf.py", line 106, in gamma_expr
coef * ((T >= 0) * (T+1.0e-14))**(shape-1)
TypeError: unsupported operand type(s) for *: 'GreaterThan' and 'Add'
/build/nipy-0.4.3~rc1/doc/users/glm_spec.rst:475: WARNING: Exception occurred in plotting event_amplitude
from /build/nipy-0.4.3~rc1/doc/users/plots/event_amplitude.py:
Traceback (most recent call last):
File "/usr/lib/python3/dist-packages/matplotlib/sphinxext/plot_directive.py", line 472, in run_code
exec(code, ns)
File "<string>", line 7, in <module>
File "/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/modalities/fmri/hrf.py", line 123, in <module>
_gexpr = gamma_expr(5.4, 5.2) - 0.35 * gamma_expr(10.8, 7.35)
File "/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.9_nipy/build/nipy/modalities/fmri/hrf.py", line 106, in gamma_expr
coef * ((T >= 0) * (T+1.0e-14))**(shape-1)
TypeError: unsupported operand type(s) for *: 'GreaterThan' and 'Add'
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/build/nipy-0.4.3~rc1/doc/devel/code_discussions/brainvisa_repositories.rst:6: WARNING: term BrainVISA not found in case sensitive match.made a reference to BrainVisa instead.
/build/nipy-0.4.3~rc1/doc/devel/code_discussions/usecases/resampling.rst:7: WARNING: undefined label: images (if the link has no caption the label must precede a section header)
/build/nipy-0.4.3~rc1/doc/devel/development_quickstart.rst:39: WARNING: undefined label: data_files (if the link has no caption the label must precede a section header)
/build/nipy-0.4.3~rc1/doc/devel/guidelines/sphinx_helpers.rst:149: WARNING: Pygments lexer name 'ipython' is not known
/build/nipy-0.4.3~rc1/doc/glossary.rst:60: WARNING: term matlab not found in case sensitive match.made a reference to Matlab instead.
/build/nipy-0.4.3~rc1/doc/glossary.rst:154: WARNING: term matlab not found in case sensitive match.made a reference to Matlab instead.
/build/nipy-0.4.3~rc1/doc/users/glm_spec.rst:59: WARNING: term not in glossary: marked point process
/build/nipy-0.4.3~rc1/doc/users/glm_spec.rst:187: WARNING: undefined label: face-object (if the link has no caption the label must precede a section header)
/build/nipy-0.4.3~rc1/doc/users/glm_spec.rst:230: WARNING: undefined label: intensity (if the link has no caption the label must precede a section header)
/build/nipy-0.4.3~rc1/doc/users/glm_spec.rst:243: WARNING: undefined label: face-object (if the link has no caption the label must precede a section header)
/build/nipy-0.4.3~rc1/doc/users/glm_spec.rst:306: WARNING: undefined label: face-object (if the link has no caption the label must precede a section header)
/build/nipy-0.4.3~rc1/doc/users/glm_spec.rst:384: WARNING: undefined label: event-amplitude (if the link has no caption the label must precede a section header)
/build/nipy-0.4.3~rc1/doc/users/glm_spec.rst:480: WARNING: undefined label: continuous-stimuli (if the link has no caption the label must precede a section header)
/build/nipy-0.4.3~rc1/doc/users/math_coordmap.rst:395: WARNING: undefined label: coordmp-discussion (if the link has no caption the label must precede a section header)
generating indices... genindex py-modindex done
writing additional pages... search done
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copying static files... done
copying extra files... done
dumping search index in English (code: en)... done
dumping object inventory... done
build succeeded, 327 warnings.
The HTML pages are in build/html.
Build finished. The HTML pages are in build/html.
ln -s build manual
Build HTML and API finished.
make[2]: Leaving directory '/build/nipy-0.4.3~rc1/doc'
: # I: Link in the local coy of mathjax
ln -sf /usr/share/javascript/mathjax/ doc/build/html/_static/mathjax
make[1]: Leaving directory '/build/nipy-0.4.3~rc1'
dh_auto_build -O--buildsystem=pybuild -Npython3-nipy -Npython-nipy-doc
pybuild --build --test-nose -i python{version} -p "3.8 3.9"
I: pybuild base:232: /usr/bin/python3.8 setup.py build
lapack_opt_info:
lapack_mkl_info:
customize UnixCCompiler
libraries mkl_rt not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
openblas_lapack_info:
libraries openblas not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
openblas_clapack_info:
libraries openblas,lapack not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
flame_info:
libraries flame not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
atlas_3_10_threads_info:
Setting PTATLAS=ATLAS
libraries lapack_atlas not found in /usr/local/lib
libraries tatlas,tatlas not found in /usr/local/lib
libraries lapack_atlas not found in /usr/lib
libraries tatlas,tatlas not found in /usr/lib
libraries lapack_atlas not found in /usr/lib/x86_64-linux-gnu
libraries tatlas,tatlas not found in /usr/lib/x86_64-linux-gnu
<class 'numpy.distutils.system_info.atlas_3_10_threads_info'>
NOT AVAILABLE
atlas_3_10_info:
libraries lapack_atlas not found in /usr/local/lib
libraries satlas,satlas not found in /usr/local/lib
libraries lapack_atlas not found in /usr/lib
libraries satlas,satlas not found in /usr/lib
libraries lapack_atlas not found in /usr/lib/x86_64-linux-gnu
libraries satlas,satlas not found in /usr/lib/x86_64-linux-gnu
<class 'numpy.distutils.system_info.atlas_3_10_info'>
NOT AVAILABLE
atlas_threads_info:
Setting PTATLAS=ATLAS
libraries lapack_atlas not found in /usr/local/lib
libraries ptf77blas,ptcblas,atlas not found in /usr/local/lib
libraries lapack_atlas not found in /usr/lib
libraries ptf77blas,ptcblas,atlas not found in /usr/lib
libraries lapack_atlas not found in /usr/lib/x86_64-linux-gnu
libraries ptf77blas,ptcblas,atlas not found in /usr/lib/x86_64-linux-gnu
<class 'numpy.distutils.system_info.atlas_threads_info'>
NOT AVAILABLE
atlas_info:
libraries lapack_atlas not found in /usr/local/lib
libraries f77blas,cblas,atlas not found in /usr/local/lib
libraries lapack_atlas not found in /usr/lib
libraries f77blas,cblas,atlas not found in /usr/lib
libraries lapack_atlas not found in /usr/lib/x86_64-linux-gnu
libraries f77blas,cblas,atlas not found in /usr/lib/x86_64-linux-gnu
<class 'numpy.distutils.system_info.atlas_info'>
NOT AVAILABLE
accelerate_info:
NOT AVAILABLE
lapack_info:
FOUND:
libraries = ['lapack', 'lapack']
library_dirs = ['/usr/lib/x86_64-linux-gnu']
language = f77
blas_opt_info:
blas_mkl_info:
libraries mkl_rt not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
blis_info:
libraries blis not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
openblas_info:
libraries openblas not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
atlas_3_10_blas_threads_info:
Setting PTATLAS=ATLAS
libraries tatlas not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
atlas_3_10_blas_info:
libraries satlas not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
atlas_blas_threads_info:
Setting PTATLAS=ATLAS
libraries ptf77blas,ptcblas,atlas not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
atlas_blas_info:
libraries f77blas,cblas,atlas not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
blas_info:
C compiler: x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/build/nipy-0.4.3~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC
creating /tmp/tmpllw21swq/tmp
creating /tmp/tmpllw21swq/tmp/tmpllw21swq
compile options: '-I/usr/local/include -I/usr/include -c'
x86_64-linux-gnu-gcc: /tmp/tmpllw21swq/source.c
x86_64-linux-gnu-gcc -pthread /tmp/tmpllw21swq/tmp/tmpllw21swq/source.o -lblas -o /tmp/tmpllw21swq/a.out
FOUND:
libraries = ['blas', 'blas']
library_dirs = ['/usr/lib/x86_64-linux-gnu']
include_dirs = ['/usr/local/include', '/usr/include']
language = c
define_macros = [('HAVE_CBLAS', None)]
FOUND:
define_macros = [('NO_ATLAS_INFO', 1), ('HAVE_CBLAS', None)]
libraries = ['blas', 'blas']
library_dirs = ['/usr/lib/x86_64-linux-gnu']
include_dirs = ['/usr/local/include', '/usr/include']
language = c
FOUND:
libraries = ['lapack', 'lapack', 'blas', 'blas']
library_dirs = ['/usr/lib/x86_64-linux-gnu']
language = c
define_macros = [('NO_ATLAS_INFO', 1), ('HAVE_CBLAS', None)]
include_dirs = ['/usr/local/include', '/usr/include']
Building with (slow) Lapack lite distribution: set NIPY_EXTERNAL_LAPACK environment variable or use setup.cfg to enable link to optimized BLAS / LAPACK
LAPACK build options:
library_dirs: []
libraries: []
lapack_info: {'libraries': ['lapack', 'lapack', 'blas', 'blas'], 'library_dirs': ['/usr/lib/x86_64-linux-gnu'], 'language': 'c', 'define_macros': [('NO_ATLAS_INFO', 1), ('HAVE_CBLAS', None)], 'include_dirs': ['/usr/local/include', '/usr/include']}
running build
running config_cc
unifing config_cc, config, build_clib, build_ext, build commands --compiler options
running config_fc
unifing config_fc, config, build_clib, build_ext, build commands --fcompiler options
running build_src
build_src
building py_modules sources
building library "cstat" sources
building extension "nipy.algorithms.registration._registration" sources
building extension "nipy.algorithms.segmentation._segmentation" sources
building extension "nipy.algorithms.statistics.intvol" sources
building extension "nipy.algorithms.statistics.histogram" sources
building extension "nipy.algorithms.statistics._quantile" sources
building extension "nipy.algorithms.graph._graph" sources
building extension "nipy.labs.bindings.linalg" sources
building extension "nipy.labs.bindings.array" sources
building extension "nipy.labs.bindings.wrapper" sources
building extension "nipy.labs.glm.kalman" sources
building extension "nipy.labs.group.onesample" sources
building extension "nipy.labs.group.twosample" sources
building extension "nipy.labs.group.glm_twolevel" sources
building extension "nipy.labs.utils.routines" sources
building data_files sources
build_src: building npy-pkg config files
running build_py
copying build/src.linux-x86_64-3.8/nipy/__config__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy
copying build/src.linux-x86_64-3.8/nipy/labs/__config__.py -> /build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/build/nipy/labs
running build_clib
customize UnixCCompiler
customize UnixCCompiler using build_clib
running build_ext
customize UnixCCompiler
customize UnixCCompiler using MyBuildExt
________________________________________________________________________________
Could not find datasource "nipy/templates" in data path "/usr/share/nipy:/usr/local/share/nipy:/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/.nipy"; Is it possible you have not installed a data package?
You may need the package "nipy-templates"
You can download and install the package from:
http://nipy.org/data-packages/nipy-templates-0.2.tar.gz
Check the instructions in the ``doc/users/install_data.rst`` file in the nipy
source tree, or online at http://nipy.org/nipy/users/install_data.html
If you have the package, have you set the path to the package correctly?
________________________________________________________________________________
Could not find datasource "nipy/data" in data path "/usr/share/nipy:/usr/local/share/nipy:/build/nipy-0.4.3~rc1/.pybuild/cpython3_3.8_nipy/.nipy"; Is it possible you have not installed a data package?
You may need the package "nipy-data"
You can download and install the package from:
http://nipy.org/data-packages/nipy-data-0.2.tar.gz
Check the instructions in the ``doc/users/install_data.rst`` file in the nipy
source tree, or online at http://nipy.org/nipy/users/install_data.html
If you have the package, have you set the path to the package correctly?
running build_scripts
/usr/lib/python3/dist-packages/numpy/distutils/system_info.py:1914: UserWarning:
Optimized (vendor) Blas libraries are not found.
Falls back to netlib Blas library which has worse performance.
A better performance should be easily gained by switching
Blas library.
if self._calc_info(blas):
I: pybuild base:232: /usr/bin/python3 setup.py build
lapack_opt_info:
lapack_mkl_info:
customize UnixCCompiler
libraries mkl_rt not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
openblas_lapack_info:
libraries openblas not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
openblas_clapack_info:
libraries openblas,lapack not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
flame_info:
libraries flame not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
atlas_3_10_threads_info:
Setting PTATLAS=ATLAS
libraries lapack_atlas not found in /usr/local/lib
libraries tatlas,tatlas not found in /usr/local/lib
libraries lapack_atlas not found in /usr/lib
libraries tatlas,tatlas not found in /usr/lib
libraries lapack_atlas not found in /usr/lib/x86_64-linux-gnu
libraries tatlas,tatlas not found in /usr/lib/x86_64-linux-gnu
<class 'numpy.distutils.system_info.atlas_3_10_threads_info'>
NOT AVAILABLE
atlas_3_10_info:
libraries lapack_atlas not found in /usr/local/lib
libraries satlas,satlas not found in /usr/local/lib
libraries lapack_atlas not found in /usr/lib
libraries satlas,satlas not found in /usr/lib
libraries lapack_atlas not found in /usr/lib/x86_64-linux-gnu
libraries satlas,satlas not found in /usr/lib/x86_64-linux-gnu
<class 'numpy.distutils.system_info.atlas_3_10_info'>
NOT AVAILABLE
atlas_threads_info:
Setting PTATLAS=ATLAS
libraries lapack_atlas not found in /usr/local/lib
libraries ptf77blas,ptcblas,atlas not found in /usr/local/lib
libraries lapack_atlas not found in /usr/lib
libraries ptf77blas,ptcblas,atlas not found in /usr/lib
libraries lapack_atlas not found in /usr/lib/x86_64-linux-gnu
libraries ptf77blas,ptcblas,atlas not found in /usr/lib/x86_64-linux-gnu
<class 'numpy.distutils.system_info.atlas_threads_info'>
NOT AVAILABLE
atlas_info:
libraries lapack_atlas not found in /usr/local/lib
libraries f77blas,cblas,atlas not found in /usr/local/lib
libraries lapack_atlas not found in /usr/lib
libraries f77blas,cblas,atlas not found in /usr/lib
libraries lapack_atlas not found in /usr/lib/x86_64-linux-gnu
libraries f77blas,cblas,atlas not found in /usr/lib/x86_64-linux-gnu
<class 'numpy.distutils.system_info.atlas_info'>
NOT AVAILABLE
accelerate_info:
NOT AVAILABLE
lapack_info:
FOUND:
libraries = ['lapack', 'lapack']
library_dirs = ['/usr/lib/x86_64-linux-gnu']
language = f77
blas_opt_info:
blas_mkl_info:
libraries mkl_rt not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
blis_info:
libraries blis not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
openblas_info:
libraries openblas not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
atlas_3_10_blas_threads_info:
Setting PTATLAS=ATLAS
libraries tatlas not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
atlas_3_10_blas_info:
libraries satlas not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
atlas_blas_threads_info:
Setting PTATLAS=ATLAS
libraries ptf77blas,ptcblas,atlas not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
atlas_blas_info:
libraries f77blas,cblas,atlas not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
/usr/lib/python3/dist-packages/numpy/distutils/system_info.py:1914: UserWarning:
Optimized (vendor) Blas libraries are not found.
Falls back to netlib Blas library which has worse performance.
A better performance should be easily gained by switching
Blas library.
if self._calc_info(blas):
blas_info:
C compiler: x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/build/nipy-0.4.3~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC
creating /tmp/tmpgm124xoo/tmp
creating /tmp/tmpgm124xoo/tmp/tmpgm124xoo
compile options: '-I/usr/local/include -I/usr/include -c'
x86_64-linux-gnu-gcc: /tmp/tmpgm124xoo/source.c
x86_64-linux-gnu-gcc -pthread /tmp/tmpgm124xoo/tmp/tmpgm124xoo/source.o -lblas -o /tmp/tmpgm124xoo/a.out
FOUND:
libraries = ['blas', 'blas']
library_dirs = ['/usr/lib/x86_64-linux-gnu']
include_dirs = ['/usr/local/include', '/usr/include']
language = c
define_macros = [('HAVE_CBLAS', None)]
FOUND:
define_macros = [('NO_ATLAS_INFO', 1), ('HAVE_CBLAS', None)]
libraries = ['blas', 'blas']
library_dirs = ['/usr/lib/x86_64-linux-gnu']
include_dirs = ['/usr/local/include', '/usr/include']
language = c
FOUND:
libraries = ['lapack', 'lapack', 'blas', 'blas']
library_dirs = ['/usr/lib/x86_64-linux-gnu']
language = c
define_macros = [('NO_ATLAS_INFO', 1), ('HAVE_CBLAS', None)]
include_dirs = ['/usr/local/include', '/usr/include']
Building with (slow) Lapack lite distribution: set NIPY_EXTERNAL_LAPACK environment variable or use setup.cfg to enable link to optimized BLAS / LAPACK
LAPACK build options:
library_dirs: []
libraries: []
lapack_info: {'libraries': ['lapack', 'lapack', 'blas', 'blas'], 'library_dirs': ['/usr/lib/x86_64-linux-gnu'], 'language': 'c', 'define_macros': [('NO_ATLAS_INFO', 1), ('HAVE_CBLAS', None)], 'include_dirs': ['/usr/local/include', '/usr/include']}
running build
running config_cc
unifing config_cc, config, build_clib, build_ext, build commands --compiler options
running config_fc
unifing config_fc, config, build_clib, build_ext, build commands --fcompiler options
running build_src
build_src
building py_modules sources
building library "cstat" sources
building extension "nipy.algorithms.registration._registration" sources
building extension "nipy.algorithms.segmentation._segmentation" sources
building extension "nipy.algorithms.statistics.intvol" sources
building extension "nipy.algorithms.statistics.histogram" sources
building extension "nipy.algorithms.statistics._quantile" sources
building extension "nipy.algorithms.graph._graph" sources
building extension "nipy.labs.bindings.linalg" sources
building extension "nipy.labs.bindings.array" sources
building extension "nipy.labs.bindings.wrapper" sources
building extension "nipy.labs.glm.kalman" sources
building extension "nipy.labs.group.onesample" sources
building extension "nipy.labs.group.twosample" sources
building extension "nipy.labs.group.glm_twolevel" sources
building extension "nipy.labs.utils.routines" sources
building da
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