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Picard without GKL build failure
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| [0mI: Running in no-targz mode[0m | |
| [0mI: pbuilder: network access will be disabled during build[0m | |
| [0mI: Current time: Tue Nov 17 18:41:58 CET 2020[0m | |
| [0mI: pbuilder-time-stamp: 1605634918[0m | |
| [0mI: copying local configuration[0m | |
| [1;33mW: --override-config is not set; not updating apt.conf Read the manpage for details.[0m | |
| [0mI: mounting /proc filesystem[0m | |
| [0mI: mounting /sys filesystem[0m | |
| [0mI: creating /{dev,run}/shm[0m | |
| [0mI: mounting /dev/pts filesystem[0m | |
| [0mI: redirecting /dev/ptmx to /dev/pts/ptmx[0m | |
| [0mI: Mounting /home/michael/.ccache/[0m | |
| [0mI: policy-rc.d already exists[0m | |
| [0mI: Obtaining the cached apt archive contents[0m | |
| [0mI: Setting up ccache[0m | |
| [0mI: Copying source file[0m | |
| [0mI: copying [/home/michael/debian/picard-tools_2.23.8+dfsg-1~0local.dsc][0m | |
| [0mI: copying [/home/michael/debian/picard-tools_2.23.8+dfsg.orig.tar.xz][0m | |
| [0mI: copying [/home/michael/debian/picard-tools_2.23.8+dfsg-1~0local.debian.tar.xz][0m | |
| [0mI: Extracting source[0m | |
| dpkg-source: warning: extracting unsigned source package (picard-tools_2.23.8+dfsg-1~0local.dsc) | |
| dpkg-source: info: extracting picard-tools in picard-tools-2.23.8+dfsg | |
| dpkg-source: info: unpacking picard-tools_2.23.8+dfsg.orig.tar.xz | |
| dpkg-source: info: unpacking picard-tools_2.23.8+dfsg-1~0local.debian.tar.xz | |
| dpkg-source: info: using patch list from debian/patches/series | |
| dpkg-source: info: applying 10-build.xml.patch | |
| dpkg-source: info: applying 20-shadowjar.patch | |
| dpkg-source: info: applying 30-tests-fix-dataprovider.patch | |
| dpkg-source: info: applying 40-tests-fix-testng.patch | |
| dpkg-source: info: applying 50-tests-exclude-Barclay.patch | |
| dpkg-source: info: applying remove_google_nio.patch | |
| dpkg-source: info: applying fix_unreadabletests.patch | |
| dpkg-source: info: applying 60-tests-exclude-network.patch | |
| [0mI: Not using root during the build.[0m | |
| [0mI: Installing the build-deps[0m | |
| [0mI: user script /var/cache/pbuilder/build/cow.2184291/tmp/hooks/D05deps starting[0m | |
| + DEPSPATH=/ | |
| + [ -n ] | |
| + set +ex | |
| [0mI: user script /var/cache/pbuilder/build/cow.2184291/tmp/hooks/D05deps finished[0m | |
| [0mI: user script /var/cache/pbuilder/build/cow.2184291/tmp/hooks/D10-man-db starting[0m | |
| I: Preseed man-db/auto-update to false | |
| [0mI: user script /var/cache/pbuilder/build/cow.2184291/tmp/hooks/D10-man-db finished[0m | |
| [0mI: -> Attempting to satisfy build-dependencies[0m | |
| Note, using file '/build/picard-tools_2.23.8+dfsg-1~0local.dsc' to get the build dependencies | |
| Reading package lists... | |
| Building dependency tree... | |
| Reading state information... | |
| The following NEW packages will be installed: | |
| ant ant-optional antlr autoconf automake autopoint autotools-dev bnd | |
| bsdextrautils ca-certificates ca-certificates-java dctrl-tools debhelper | |
| default-jdk default-jdk-doc default-jdk-headless default-jre | |
| default-jre-headless devscripts dh-autoreconf dh-strip-nondeterminism | |
| dirmngr dwz fakeroot file fontconfig fontconfig-config fonts-dejavu-core | |
| gettext gettext-base gnupg gnupg-l10n gnupg-utils gpg gpg-agent | |
| gpg-wks-client gpg-wks-server gpgconf gpgsm gradle gradle-debian-helper | |
| groff-base groovy intltool-debian ivy java-common java-wrappers javahelper | |
| junit4 libactivation-java libantlr-java libaopalliance-java | |
| libapache-pom-java libarchive-zip-perl libargs4j-java libasm-java libasound2 | |
| libasound2-data libassuan0 libatinject-jsr330-api-java libavahi-client3 | |
| libavahi-common-data libavahi-common3 libb-hooks-op-check-perl | |
| libbarclay-java libbcel-java libbcpg-java libbcprov-java libblas3 libbrotli1 | |
| libbsd0 libbsf-java libbsh-java libcairo2 libcdi-api-java | |
| libclass-method-modifiers-perl libcodemodel-java libcommons-cli-java | |
| libcommons-codec-java libcommons-collections3-java | |
| libcommons-collections4-java libcommons-compress-java libcommons-io-java | |
| libcommons-jexl2-java libcommons-lang-java libcommons-lang3-java | |
| libcommons-logging-java libcommons-math3-java libcommons-parent-java | |
| libcroco3 libcups2 libcurl4 libdatrie1 libdbus-1-3 libdd-plist-java | |
| libdebhelper-perl libdevel-callchecker-perl libdom4j-java libdrm-amdgpu1 | |
| libdrm-common libdrm-nouveau2 libdrm-radeon1 libdrm2 libdtd-parser-java | |
| libdynaloader-functions-perl libedit2 libel-api-java libelf1 | |
| libencode-locale-perl libexpat1 libfakeroot libfastinfoset-java | |
| libfelix-framework-java libfelix-gogo-runtime-java libfelix-resolver-java | |
| libfile-homedir-perl libfile-listing-perl libfile-stripnondeterminism-perl | |
| libfile-which-perl libfindbugs-java libfontconfig1 libfreemarker-java | |
| libfreetype6 libfribidi0 libgatk-native-bindings-java | |
| libgeronimo-annotation-1.3-spec-java libgeronimo-interceptor-3.0-spec-java | |
| libgfortran5 libgif7 libgl1 libgl1-mesa-dri libglapi-mesa libglib2.0-0 | |
| libglvnd0 libglx-mesa0 libglx0 libgoogle-gson-java libgradle-core-java | |
| libgradle-plugins-java libgraphite2-3 libguava-java libguice-java | |
| libhamcrest-java libharfbuzz0b libhawtjni-runtime-java libhtml-parser-perl | |
| libhtml-tagset-perl libhtml-tree-perl libhtsjdk-java libhtsjdk-java-doc | |
| libhttp-cookies-perl libhttp-date-perl libhttp-message-perl | |
| libhttp-negotiate-perl libhttpclient-java libhttpcore-java libice6 libicu67 | |
| libimport-into-perl libio-html-perl libio-pty-perl libio-socket-ssl-perl | |
| libipc-run-perl libistack-commons-java libjansi-java libjansi-native-java | |
| libjarjar-java libjatl-java libjavaewah-java libjaxb-api-java libjaxb-java | |
| libjaxen-java libjbig0 libjcifs-java libjcip-annotations-java | |
| libjcommander-java libjformatstring-java libjgit-java libjline2-java | |
| libjna-java libjna-jni libjoptsimple-java libjpeg62-turbo libjs-jquery | |
| libjsch-java libjsoup-java libjsp-api-java libjsr305-java libjzlib-java | |
| libkryo-java libksba8 liblapack3 liblcms2-2 libldap-2.4-2 liblightcouch-java | |
| libllvm11 liblog4j2-java liblogback-java liblwp-mediatypes-perl | |
| liblwp-protocol-https-perl libmagic-mgc libmagic1 | |
| libmaven-file-management-java libmaven-parent-java libmaven-resolver-java | |
| libmaven-shared-io-java libmaven-shared-utils-java libmaven3-core-java | |
| libminlog-java libmodule-runtime-perl libmongodb-java libmoo-perl | |
| libnative-platform-java libnative-platform-jni libncurses6 libnekohtml-java | |
| libnet-http-perl libnet-ssleay-perl libnghttp2-14 libngs-java libngs-sdk-dev | |
| libngs-sdk2 libnpth0 libnspr4 libnss3 libobjenesis-java | |
| libosgi-annotation-java libosgi-compendium-java libosgi-core-java | |
| libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils | |
| libpaper1 libparams-classify-perl libpcsclite1 libpipeline1 libpixman-1-0 | |
| libplexus-archiver-java libplexus-cipher-java libplexus-classworlds-java | |
| libplexus-component-annotations-java libplexus-container-default-java | |
| libplexus-container-default1.5-java libplexus-interpolation-java | |
| libplexus-io-java libplexus-sec-dispatcher-java libplexus-utils2-java | |
| libpng16-16 libpolyglot-maven-java libpsl5 libpython3-stdlib | |
| libpython3.8-minimal libpython3.8-stdlib libqdox-java libreadline8 | |
| libreflectasm-java librelaxng-datatype-java librhino-java librngom-java | |
| librole-tiny-perl librtmp1 libsasl2-2 libsasl2-modules-db libsensors-config | |
| libsensors5 libservlet-api-java libservlet3.1-java libsigsegv2 | |
| libsimple-http-java libsisu-guice-java libsisu-inject-java libsisu-ioc-java | |
| libsisu-plexus-java libslf4j-java libsm6 libsnappy-java libsnappy-jni | |
| libsnappy1v5 libssh2-1 libstax-ex-java libstreambuffer-java | |
| libstrictures-perl libsub-override-perl libsub-quote-perl libtcl8.6 | |
| libthai-data libthai0 libtiff5 libtimedate-perl libtk8.6 libtool | |
| libtry-tiny-perl libtxw2-java libuchardet0 liburi-perl libwagon-file-java | |
| libwagon-http-java libwagon-provider-api-java libwebp6 libwebsocket-api-java | |
| libwww-perl libwww-robotrules-perl libx11-6 libx11-data libx11-xcb1 libxau6 | |
| libxbean-reflect-java libxcb-dri2-0 libxcb-dri3-0 libxcb-glx0 | |
| libxcb-present0 libxcb-render0 libxcb-shm0 libxcb-sync1 libxcb-xfixes0 | |
| libxcb1 libxdamage1 libxdmcp6 libxerces2-java libxext6 libxfixes3 libxft2 | |
| libxi6 libxml-commons-external-java libxml-commons-resolver1.1-java libxml2 | |
| libxpp3-java libxrender1 libxshmfence1 libxsom-java libxss1 libxstream-java | |
| libxt6 libxtst6 libxxf86vm1 libxz-java libyaml-snake-java libz3-4 m4 mailcap | |
| man-db maven-repo-helper media-types mime-support netbase node-jquery | |
| openjdk-11-doc openjdk-11-jdk openjdk-11-jdk-headless openjdk-11-jre | |
| openjdk-11-jre-headless openssl patchutils perl-openssl-defaults | |
| pinentry-curses po-debconf python3 python3-minimal python3.8 | |
| python3.8-minimal r-base-core readline-common sensible-utils testng tzdata | |
| ucf unzip wdiff x11-common xdg-utils zip | |
| 0 upgraded, 372 newly installed, 0 to remove and 0 not upgraded. | |
| Need to get 624 kB/468 MB of archives. | |
| After this operation, 1176 MB of additional disk space will be used. | |
| Get:1 http://deb.debian.org/debian sid/main arm64 libgfortran5 arm64 10.2.0-17 [333 kB] | |
| Get:2 http://deb.debian.org/debian sid/main arm64 libpango-1.0-0 arm64 1.46.2-3 [183 kB] | |
| Get:3 http://deb.debian.org/debian sid/main arm64 libpangoft2-1.0-0 arm64 1.46.2-3 [59.4 kB] | |
| Get:4 http://deb.debian.org/debian sid/main arm64 libpangocairo-1.0-0 arm64 1.46.2-3 [48.6 kB] | |
| debconf: delaying package configuration, since apt-utils is not installed | |
| Fetched 624 kB in 0s (1758 kB/s) | |
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| Setting up liblightcouch-java (0.0.6-1) ... | |
| Setting up libwagon-http-java (3.3.4-1) ... | |
| Setting up libmaven-shared-utils-java (3.3.0-1) ... | |
| Setting up libxss1:arm64 (1:1.2.3-1) ... | |
| Setting up libfontconfig1:arm64 (2.13.1-4.2) ... | |
| Setting up libfastinfoset-java (1.2.12-3) ... | |
| Setting up libjline2-java (2.14.6-3) ... | |
| Setting up libjgit-java (3.7.1-6) ... | |
| Setting up fontconfig (2.13.1-4.2) ... | |
| Regenerating fonts cache... done. | |
| Setting up libxft2:arm64 (2.3.2-2) ... | |
| Setting up libplexus-io-java (3.2.0-1) ... | |
| Setting up libglx-mesa0:arm64 (20.2.2-1) ... | |
| Setting up libxi6:arm64 (2:1.7.10-1) ... | |
| Setting up gpg-wks-client (2.2.20-1) ... | |
| Setting up libglx0:arm64 (1.3.2-1) ... | |
| Setting up libimport-into-perl (1.002005-1) ... | |
| Setting up libxtst6:arm64 (2:1.2.3-1) ... | |
| Setting up libmoo-perl (2.004000-1) ... | |
| Setting up po-debconf (1.0.21) ... | |
| Setting up liblog4j2-java (2.11.2-1) ... | |
| Setting up libtk8.6:arm64 (8.6.10-1) ... | |
| Setting up libpango-1.0-0:arm64 (1.46.2-3) ... | |
| Setting up libsisu-inject-java (0.3.3-1) ... | |
| Setting up libcairo2:arm64 (1.16.0-4) ... | |
| Setting up libsisu-plexus-java (0.3.3-3) ... | |
| Setting up libgl1:arm64 (1.3.2-1) ... | |
| Setting up gnupg (2.2.20-1) ... | |
| Setting up libplexus-archiver-java (3.6.0-2) ... | |
| Setting up libpangoft2-1.0-0:arm64 (1.46.2-3) ... | |
| Setting up libbarclay-java (2.1.0-3) ... | |
| Setting up libpangocairo-1.0-0:arm64 (1.46.2-3) ... | |
| Setting up libmaven3-core-java (3.6.3-1) ... | |
| Setting up libmaven-shared-io-java (3.0.0-3) ... | |
| Setting up r-base-core (4.0.3-1) ... | |
| Creating config file /etc/R/Renviron with new version | |
| Setting up libmaven-file-management-java (3.0.0-1) ... | |
| Setting up default-jre-headless (2:1.11-72) ... | |
| Setting up libwww-perl (6.49-1) ... | |
| Setting up openjdk-11-jre-headless:arm64 (11.0.9.1+1-1) ... | |
| update-alternatives: using /usr/lib/jvm/java-11-openjdk-arm64/bin/java to provide /usr/bin/java (java) in auto mode | |
| update-alternatives: using /usr/lib/jvm/java-11-openjdk-arm64/bin/jfr to provide /usr/bin/jfr (jfr) in auto mode | |
| update-alternatives: using /usr/lib/jvm/java-11-openjdk-arm64/bin/jjs to provide /usr/bin/jjs (jjs) in auto mode | |
| update-alternatives: using /usr/lib/jvm/java-11-openjdk-arm64/bin/keytool to provide /usr/bin/keytool (keytool) in auto mode | |
| update-alternatives: using /usr/lib/jvm/java-11-openjdk-arm64/bin/pack200 to provide /usr/bin/pack200 (pack200) in auto mode | |
| update-alternatives: using /usr/lib/jvm/java-11-openjdk-arm64/bin/rmid to provide /usr/bin/rmid (rmid) in auto mode | |
| update-alternatives: using /usr/lib/jvm/java-11-openjdk-arm64/bin/rmiregistry to provide /usr/bin/rmiregistry (rmiregistry) in auto mode | |
| update-alternatives: using /usr/lib/jvm/java-11-openjdk-arm64/bin/unpack200 to provide /usr/bin/unpack200 (unpack200) in auto mode | |
| update-alternatives: using /usr/lib/jvm/java-11-openjdk-arm64/lib/jexec to provide /usr/bin/jexec (jexec) in auto mode | |
| Setting up openjdk-11-jre:arm64 (11.0.9.1+1-1) ... | |
| Setting up maven-repo-helper (1.9.4) ... | |
| Setting up openjdk-11-jdk-headless:arm64 (11.0.9.1+1-1) ... | |
| update-alternatives: using /usr/lib/jvm/java-11-openjdk-arm64/bin/jar to provide /usr/bin/jar (jar) in auto mode | |
| update-alternatives: using /usr/lib/jvm/java-11-openjdk-arm64/bin/jarsigner to provide /usr/bin/jarsigner (jarsigner) in auto mode | |
| update-alternatives: using /usr/lib/jvm/java-11-openjdk-arm64/bin/javac to provide /usr/bin/javac (javac) in auto mode | |
| update-alternatives: using /usr/lib/jvm/java-11-openjdk-arm64/bin/javadoc to provide /usr/bin/javadoc (javadoc) in auto mode | |
| update-alternatives: using /usr/lib/jvm/java-11-openjdk-arm64/bin/javap to provide /usr/bin/javap (javap) in auto mode | |
| update-alternatives: using /usr/lib/jvm/java-11-openjdk-arm64/bin/jcmd to provide /usr/bin/jcmd (jcmd) in auto mode | |
| update-alternatives: using /usr/lib/jvm/java-11-openjdk-arm64/bin/jdb to provide /usr/bin/jdb (jdb) in auto mode | |
| update-alternatives: using /usr/lib/jvm/java-11-openjdk-arm64/bin/jdeprscan to provide /usr/bin/jdeprscan (jdeprscan) in auto mode | |
| update-alternatives: using /usr/lib/jvm/java-11-openjdk-arm64/bin/jdeps to provide /usr/bin/jdeps (jdeps) in auto mode | |
| update-alternatives: using /usr/lib/jvm/java-11-openjdk-arm64/bin/jimage to provide /usr/bin/jimage (jimage) in auto mode | |
| update-alternatives: using /usr/lib/jvm/java-11-openjdk-arm64/bin/jinfo to provide /usr/bin/jinfo (jinfo) in auto mode | |
| update-alternatives: using /usr/lib/jvm/java-11-openjdk-arm64/bin/jlink to provide /usr/bin/jlink (jlink) in auto mode | |
| update-alternatives: using /usr/lib/jvm/java-11-openjdk-arm64/bin/jmap to provide /usr/bin/jmap (jmap) in auto mode | |
| update-alternatives: using /usr/lib/jvm/java-11-openjdk-arm64/bin/jmod to provide /usr/bin/jmod (jmod) in auto mode | |
| update-alternatives: using /usr/lib/jvm/java-11-openjdk-arm64/bin/jps to provide /usr/bin/jps (jps) in auto mode | |
| update-alternatives: using /usr/lib/jvm/java-11-openjdk-arm64/bin/jrunscript to provide /usr/bin/jrunscript (jrunscript) in auto mode | |
| update-alternatives: using /usr/lib/jvm/java-11-openjdk-arm64/bin/jshell to provide /usr/bin/jshell (jshell) in auto mode | |
| update-alternatives: using /usr/lib/jvm/java-11-openjdk-arm64/bin/jstack to provide /usr/bin/jstack (jstack) in auto mode | |
| update-alternatives: using /usr/lib/jvm/java-11-openjdk-arm64/bin/jstat to provide /usr/bin/jstat (jstat) in auto mode | |
| update-alternatives: using /usr/lib/jvm/java-11-openjdk-arm64/bin/jstatd to provide /usr/bin/jstatd (jstatd) in auto mode | |
| update-alternatives: using /usr/lib/jvm/java-11-openjdk-arm64/bin/rmic to provide /usr/bin/rmic (rmic) in auto mode | |
| update-alternatives: using /usr/lib/jvm/java-11-openjdk-arm64/bin/serialver to provide /usr/bin/serialver (serialver) in auto mode | |
| update-alternatives: using /usr/lib/jvm/java-11-openjdk-arm64/bin/jaotc to provide /usr/bin/jaotc (jaotc) in auto mode | |
| update-alternatives: using /usr/lib/jvm/java-11-openjdk-arm64/bin/jhsdb to provide /usr/bin/jhsdb (jhsdb) in auto mode | |
| Setting up default-jre (2:1.11-72) ... | |
| Setting up antlr (2.7.7+dfsg-10) ... | |
| Setting up dh-autoreconf (19) ... | |
| Setting up default-jdk-headless (2:1.11-72) ... | |
| Setting up devscripts (2.20.4) ... | |
| Setting up ivy (2.4.0-5) ... | |
| Setting up ant (1.10.9-1) ... | |
| Setting up libcodemodel-java (2.6+jaxb2.3.0.1-9) ... | |
| Setting up openjdk-11-jdk:arm64 (11.0.9.1+1-1) ... | |
| update-alternatives: using /usr/lib/jvm/java-11-openjdk-arm64/bin/jconsole to provide /usr/bin/jconsole (jconsole) in auto mode | |
| Setting up ca-certificates-java (20190909) ... | |
| /usr/bin/head: cannot open '/etc/ssl/certs/java/cacerts' for reading: No such file or directory | |
| Adding debian:ACCVRAIZ1.pem | |
| Adding debian:GTS_Root_R4.pem | |
| Adding debian:T-TeleSec_GlobalRoot_Class_3.pem | |
| Adding debian:Go_Daddy_Class_2_CA.pem | |
| Adding debian:Buypass_Class_3_Root_CA.pem | |
| Adding debian:GeoTrust_Universal_CA_2.pem | |
| Adding debian:SSL.com_Root_Certification_Authority_ECC.pem | |
| Adding debian:Taiwan_GRCA.pem | |
| Adding debian:Cybertrust_Global_Root.pem | |
| Adding debian:Hellenic_Academic_and_Research_Institutions_RootCA_2011.pem | |
| Adding debian:Certum_Trusted_Network_CA.pem | |
| Adding debian:Buypass_Class_2_Root_CA.pem | |
| Adding debian:QuoVadis_Root_CA_3.pem | |
| Adding debian:emSign_Root_CA_-_G1.pem | |
| Adding debian:Staat_der_Nederlanden_EV_Root_CA.pem | |
| Adding debian:QuoVadis_Root_CA_2_G3.pem | |
| Adding debian:Verisign_Class_3_Public_Primary_Certification_Authority_-_G3.pem | |
| Warning: there was a problem reading the certificate file /etc/ssl/certs/NetLock_Arany_=Class_Gold=_F?tan?s?tv?ny.pem. Message: | |
| /etc/ssl/certs/NetLock_Arany_=Class_Gold=_F?tan?s?tv?ny.pem (No such file or directory) | |
| Adding debian:DigiCert_Trusted_Root_G4.pem | |
| Adding debian:Starfield_Root_Certificate_Authority_-_G2.pem | |
| Adding debian:DigiCert_Global_Root_CA.pem | |
| Adding debian:AffirmTrust_Networking.pem | |
| Adding debian:SSL.com_Root_Certification_Authority_RSA.pem | |
| Adding debian:ISRG_Root_X1.pem | |
| Adding debian:Hellenic_Academic_and_Research_Institutions_ECC_RootCA_2015.pem | |
| Adding debian:Security_Communication_Root_CA.pem | |
| Adding debian:Comodo_AAA_Services_root.pem | |
| Adding debian:TWCA_Global_Root_CA.pem | |
| Adding debian:Amazon_Root_CA_4.pem | |
| Adding debian:CA_Disig_Root_R2.pem | |
| Adding debian:LuxTrust_Global_Root_2.pem | |
| Adding debian:ePKI_Root_Certification_Authority.pem | |
| Adding debian:SecureTrust_CA.pem | |
| Adding debian:TrustCor_RootCert_CA-2.pem | |
| Adding debian:emSign_ECC_Root_CA_-_G3.pem | |
| Adding debian:Amazon_Root_CA_3.pem | |
| Adding debian:D-TRUST_Root_Class_3_CA_2_2009.pem | |
| Adding debian:COMODO_Certification_Authority.pem | |
| Adding debian:GTS_Root_R2.pem | |
| Adding debian:SecureSign_RootCA11.pem | |
| Adding debian:Izenpe.com.pem | |
| Adding debian:DigiCert_High_Assurance_EV_Root_CA.pem | |
| Adding debian:SwissSign_Silver_CA_-_G2.pem | |
| Adding debian:Hongkong_Post_Root_CA_3.pem | |
| Adding debian:AffirmTrust_Premium.pem | |
| Adding debian:Go_Daddy_Root_Certificate_Authority_-_G2.pem | |
| Adding debian:T-TeleSec_GlobalRoot_Class_2.pem | |
| Adding debian:Hongkong_Post_Root_CA_1.pem | |
| Adding debian:GTS_Root_R3.pem | |
| Adding debian:OISTE_WISeKey_Global_Root_GA_CA.pem | |
| Adding debian:Staat_der_Nederlanden_Root_CA_-_G3.pem | |
| Adding debian:USERTrust_RSA_Certification_Authority.pem | |
| Adding debian:UCA_Extended_Validation_Root.pem | |
| Adding debian:TrustCor_RootCert_CA-1.pem | |
| Adding debian:emSign_ECC_Root_CA_-_C3.pem | |
| Adding debian:Entrust.net_Premium_2048_Secure_Server_CA.pem | |
| Adding debian:GlobalSign_Root_CA_-_R6.pem | |
| Adding debian:Entrust_Root_Certification_Authority_-_G2.pem | |
| Adding debian:IdenTrust_Public_Sector_Root_CA_1.pem | |
| Adding debian:QuoVadis_Root_CA_3_G3.pem | |
| Adding debian:Network_Solutions_Certificate_Authority.pem | |
| Adding debian:GlobalSign_ECC_Root_CA_-_R4.pem | |
| Adding debian:TUBITAK_Kamu_SM_SSL_Kok_Sertifikasi_-_Surum_1.pem | |
| Adding debian:Entrust_Root_Certification_Authority_-_G4.pem | |
| Adding debian:EC-ACC.pem | |
| Adding debian:Starfield_Services_Root_Certificate_Authority_-_G2.pem | |
| Adding debian:Sonera_Class_2_Root_CA.pem | |
| Adding debian:GTS_Root_R1.pem | |
| Adding debian:SSL.com_EV_Root_Certification_Authority_ECC.pem | |
| Adding debian:GlobalSign_Root_CA_-_R3.pem | |
| Adding debian:Baltimore_CyberTrust_Root.pem | |
| Adding debian:COMODO_RSA_Certification_Authority.pem | |
| Adding debian:Certigna.pem | |
| Adding debian:DigiCert_Global_Root_G3.pem | |
| Adding debian:QuoVadis_Root_CA.pem | |
| Adding debian:certSIGN_ROOT_CA.pem | |
| Adding debian:Certigna_Root_CA.pem | |
| Adding debian:GlobalSign_ECC_Root_CA_-_R5.pem | |
| Adding debian:AffirmTrust_Commercial.pem | |
| Adding debian:SSL.com_EV_Root_Certification_Authority_RSA_R2.pem | |
| Adding debian:UCA_Global_G2_Root.pem | |
| Adding debian:COMODO_ECC_Certification_Authority.pem | |
| Adding debian:USERTrust_ECC_Certification_Authority.pem | |
| Adding debian:Actalis_Authentication_Root_CA.pem | |
| Adding debian:OISTE_WISeKey_Global_Root_GC_CA.pem | |
| Adding debian:DST_Root_CA_X3.pem | |
| Adding debian:Certum_Trusted_Network_CA_2.pem | |
| Adding debian:Security_Communication_RootCA2.pem | |
| Adding debian:TrustCor_ECA-1.pem | |
| Adding debian:GlobalSign_Root_CA_-_R2.pem | |
| Adding debian:Secure_Global_CA.pem | |
| Adding debian:E-Tugra_Certification_Authority.pem | |
| Adding debian:CFCA_EV_ROOT.pem | |
| Adding debian:Chambers_of_Commerce_Root_-_2008.pem | |
| Adding debian:GlobalSign_Root_CA.pem | |
| Adding debian:Starfield_Class_2_CA.pem | |
| Adding debian:emSign_Root_CA_-_C1.pem | |
| Adding debian:Atos_TrustedRoot_2011.pem | |
| Adding debian:Staat_der_Nederlanden_Root_CA_-_G2.pem | |
| Adding debian:OISTE_WISeKey_Global_Root_GB_CA.pem | |
| Adding debian:DigiCert_Assured_ID_Root_G2.pem | |
| Adding debian:AffirmTrust_Premium_ECC.pem | |
| Adding debian:D-TRUST_Root_Class_3_CA_2_EV_2009.pem | |
| Adding debian:DigiCert_Global_Root_G2.pem | |
| Adding debian:TWCA_Root_Certification_Authority.pem | |
| Adding debian:Autoridad_de_Certificacion_Firmaprofesional_CIF_A62634068.pem | |
| Adding debian:QuoVadis_Root_CA_2.pem | |
| Adding debian:IdenTrust_Commercial_Root_CA_1.pem | |
| Adding debian:DigiCert_Assured_ID_Root_CA.pem | |
| Adding debian:Entrust_Root_Certification_Authority_-_EC1.pem | |
| Adding debian:Amazon_Root_CA_2.pem | |
| Adding debian:XRamp_Global_CA_Root.pem | |
| Adding debian:SwissSign_Gold_CA_-_G2.pem | |
| Adding debian:QuoVadis_Root_CA_1_G3.pem | |
| Adding debian:Trustis_FPS_Root_CA.pem | |
| Adding debian:EE_Certification_Centre_Root_CA.pem | |
| Adding debian:Hellenic_Academic_and_Research_Institutions_RootCA_2015.pem | |
| Adding debian:Global_Chambersign_Root_-_2008.pem | |
| Adding debian:Entrust_Root_Certification_Authority.pem | |
| Adding debian:SZAFIR_ROOT_CA2.pem | |
| Adding debian:Microsec_e-Szigno_Root_CA_2009.pem | |
| Adding debian:AC_RAIZ_FNMT-RCM.pem | |
| Adding debian:Amazon_Root_CA_1.pem | |
| Adding debian:DigiCert_Assured_ID_Root_G3.pem | |
| Adding debian:GDCA_TrustAUTH_R5_ROOT.pem | |
| Adding debian:TeliaSonera_Root_CA_v1.pem | |
| done. | |
| Setting up libtxw2-java (2.3.0.1-9) ... | |
| Setting up junit4 (4.13.1-1) ... | |
| Setting up liblwp-protocol-https-perl (6.09-1) ... | |
| Setting up groovy (2.4.20-1) ... | |
| update-alternatives: using /usr/share/groovy/bin/groovy to provide /usr/bin/groovy (groovy) in auto mode | |
| update-alternatives: using /usr/share/groovy/bin/groovyc to provide /usr/bin/groovyc (groovyc) in auto mode | |
| update-alternatives: using /usr/share/groovy/bin/grape to provide /usr/bin/grape (grape) in auto mode | |
| update-alternatives: using /usr/share/groovy/bin/startGroovy to provide /usr/bin/startGroovy (startGroovy) in auto mode | |
| update-alternatives: using /usr/share/groovy/bin/groovysh to provide /usr/bin/groovysh (groovysh) in auto mode | |
| update-alternatives: using /usr/share/groovy/bin/java2groovy to provide /usr/bin/java2groovy (java2groovy) in auto mode | |
| update-alternatives: using /usr/share/groovy/bin/groovyConsole to provide /usr/bin/groovyConsole (groovyConsole) in auto mode | |
| update-alternatives: using /usr/share/groovy/bin/groovydoc to provide /usr/bin/groovydoc (groovydoc) in auto mode | |
| Setting up debhelper (13.2.1) ... | |
| Setting up default-jdk (2:1.11-72) ... | |
| Setting up ant-optional (1.10.9-1) ... | |
| Setting up bnd (5.0.1-2) ... | |
| Setting up libgradle-core-java (4.4.1-12) ... | |
| Setting up libgradle-plugins-java (4.4.1-12) ... | |
| Setting up javahelper (0.77) ... | |
| Setting up gradle (4.4.1-12) ... | |
| Setting up libistack-commons-java (3.0.6-4) ... | |
| Setting up gradle-debian-helper (2.1) ... | |
| Setting up libjaxb-java (2.3.0.1-9) ... | |
| Setting up libhtsjdk-java (2.23.0+dfsg-2) ... | |
| Processing triggers for libc-bin (2.31-4) ... | |
| Processing triggers for ca-certificates (20200601) ... | |
| Updating certificates in /etc/ssl/certs... | |
| 0 added, 0 removed; done. | |
| Running hooks in /etc/ca-certificates/update.d... | |
| done. | |
| done. | |
| W: --force-yes is deprecated, use one of the options starting with --allow instead. | |
| Reading package lists... | |
| Building dependency tree... | |
| Reading state information... | |
| debian-ports-archive-keyring is already the newest version (2019.11.05). | |
| eatmydata is already the newest version (105-9). | |
| 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. | |
| W: --force-yes is deprecated, use one of the options starting with --allow instead. | |
| [0mI: Copying back the cached apt archive contents[0m | |
| [0mI: new cache content 'libpangocairo-1.0-0_1.46.2-3_arm64.deb' added[0m | |
| [0mI: new cache content 'libpangoft2-1.0-0_1.46.2-3_arm64.deb' added[0m | |
| [0mI: new cache content 'libpango-1.0-0_1.46.2-3_arm64.deb' added[0m | |
| [0mI: new cache content 'libgfortran5_10.2.0-17_arm64.deb' added[0m | |
| [0mI: Building the package[0m | |
| [0mI: Running cd /build/picard-tools-2.23.8+dfsg/ && env PATH="/usr/lib/ccache:/usr/sbin:/usr/bin:/sbin:/bin" HOME="/nonexistent" dpkg-buildpackage -us -uc [0m | |
| dpkg-buildpackage: info: source package picard-tools | |
| dpkg-buildpackage: info: source version 2.23.8+dfsg-1~0local | |
| dpkg-buildpackage: info: source distribution UNRELEASED | |
| dpkg-buildpackage: info: source changed by Steffen Moeller <[email protected]> | |
| dpkg-source --before-build . | |
| dpkg-buildpackage: info: host architecture arm64 | |
| debian/rules clean | |
| dh clean --buildsystem=gradle --with javahelper,jh_maven_repo_helper | |
| dh_auto_clean -O--buildsystem=gradle | |
| install -d /build/picard-tools-2.23.8\+dfsg/debian/.debhelper/generated/_source/home | |
| sh -c "find . -wholename .*build/tmp | xargs echo | sed -e 's^build/tmp^build^g' | xargs rm -Rf" | |
| sh -c "find . -wholename .*build/debian | xargs echo | sed -e 's^build/tmp^build^g' | xargs rm -Rf" | |
| rm -Rf /build/picard-tools-2.23.8\+dfsg/.gradle /build/picard-tools-2.23.8\+dfsg/buildSrc/.gradle .m2 | |
| dh_autoreconf_clean -O--buildsystem=gradle | |
| jh_clean -O--buildsystem=gradle | |
| rm -fr debian/_jh_manifest* debian/_jh_build* | |
| rm -fr debian/.eclipse-build | |
| rm -f debian/orbitdeps.debhelper | |
| mh_clean -O--buildsystem=gradle | |
| debian/rules override_dh_clean | |
| make[1]: Entering directory '/build/picard-tools-2.23.8+dfsg' | |
| dh_clean | |
| rm -f debian/debhelper-build-stamp | |
| rm -rf debian/.debhelper/ | |
| rm -f -- debian/picard-tools.substvars debian/libpicard-java.substvars debian/libpicard-java-doc.substvars debian/files | |
| rm -fr -- debian/picard-tools/ debian/tmp/ debian/libpicard-java/ debian/libpicard-java-doc/ | |
| find . \( \( \ | |
| \( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o -type f -a \ | |
| \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \ | |
| -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \ | |
| -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \ | |
| -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \ | |
| \) -exec rm -f {} + \) -o \ | |
| \( -type d -a -name autom4te.cache -prune -exec rm -rf {} + \) \) | |
| # also remove bai files that are left after tests | |
| find testdata -iname "*.bai" -exec rm {} \; | |
| rm -f debian/bd-temp-substvars | |
| rm -f debian/bd.substvars | |
| make[1]: Leaving directory '/build/picard-tools-2.23.8+dfsg' | |
| dpkg-source -b . | |
| dpkg-source: info: using source format '3.0 (quilt)' | |
| dpkg-source: info: building picard-tools using existing ./picard-tools_2.23.8+dfsg.orig.tar.xz | |
| dpkg-source: info: using patch list from debian/patches/series | |
| dpkg-source: info: building picard-tools in picard-tools_2.23.8+dfsg-1~0local.debian.tar.xz | |
| dpkg-source: info: building picard-tools in picard-tools_2.23.8+dfsg-1~0local.dsc | |
| debian/rules binary | |
| dh binary --buildsystem=gradle --with javahelper,jh_maven_repo_helper | |
| dh_update_autotools_config -O--buildsystem=gradle | |
| dh_autoreconf -O--buildsystem=gradle | |
| dh_auto_configure -O--buildsystem=gradle | |
| install -d /build/picard-tools-2.23.8\+dfsg/debian/.debhelper/generated/_source/home | |
| jh_linkjars -O--buildsystem=gradle | |
| debian/rules override_dh_auto_build | |
| make[1]: Entering directory '/build/picard-tools-2.23.8+dfsg' | |
| blhc: ignore-line-regexp: .*gradle.*ScriptTransformer.* | |
| dh_auto_build -- jar javadoc | |
| mkdir -p .gradle/init.d | |
| cp /usr/share/gradle-debian-helper/init.gradle .gradle/init.d/ | |
| gradle --info --console plain --offline --stacktrace --no-daemon --refresh-dependencies --gradle-user-home .gradle -Duser.home=. -Duser.name=debian -Ddebian.package=picard-tools -Dfile.encoding=UTF-8 --parallel --max-workers=8 jar javadoc | |
| Initialized native services in: /build/picard-tools-2.23.8+dfsg/.gradle/native | |
| To honour the JVM settings for this build a new JVM will be forked. Please consider using the daemon: https://docs.gradle.org/4.4.1/userguide/gradle_daemon.html. | |
| Starting process 'Gradle build daemon'. Working directory: /build/picard-tools-2.23.8+dfsg/.gradle/daemon/4.4.1 Command: /usr/lib/jvm/java-11-openjdk-arm64/bin/java -Xbootclasspath/a:/usr/share/java/gradle-helper-hook.jar:/usr/share/java/maven-repo-helper.jar -Dfile.encoding=UTF-8 -Duser.country=US -Duser.language=en -Duser.variant -cp /usr/share/gradle/lib/gradle-launcher-4.4.1.jar org.gradle.launcher.daemon.bootstrap.GradleDaemon 4.4.1 | |
| Successfully started process 'Gradle build daemon' | |
| An attempt to start the daemon took 5.782 secs. | |
| The client will now receive all logging from the daemon (pid: 2220347). The daemon log file: /build/picard-tools-2.23.8+dfsg/.gradle/daemon/4.4.1/daemon-2220347.out.log | |
| Daemon will be stopped at the end of the build stopping after processing | |
| Closing daemon's stdin at end of input. | |
| The daemon will no longer process any standard input. | |
| Using 8 worker leases. | |
| Creating new cache for fileHashes, path /build/picard-tools-2.23.8+dfsg/.gradle/caches/4.4.1/fileHashes/fileHashes.bin, access org.gradle.cache.internal.DefaultCacheAccess@76a454aa | |
| Creating new cache for resourceHashesCache, path /build/picard-tools-2.23.8+dfsg/.gradle/caches/4.4.1/fileHashes/resourceHashesCache.bin, access org.gradle.cache.internal.DefaultCacheAccess@76a454aa | |
| Creating new cache for fileHashes, path /build/picard-tools-2.23.8+dfsg/.gradle/4.4.1/fileHashes/fileHashes.bin, access org.gradle.cache.internal.DefaultCacheAccess@4f1d0e78 | |
| Starting Build | |
| Compiling initialization script '/build/picard-tools-2.23.8+dfsg/.gradle/init.d/init.gradle' using SubsetScriptTransformer. | |
| Creating new cache for metadata-1.1/results, path /build/picard-tools-2.23.8+dfsg/.gradle/caches/transforms-1/metadata-1.1/results.bin, access org.gradle.cache.internal.DefaultCacheAccess@21a50fc7 | |
| Compiling initialization script '/build/picard-tools-2.23.8+dfsg/.gradle/init.d/init.gradle' using BuildScriptTransformer. | |
| Compiling settings file '/build/picard-tools-2.23.8+dfsg/settings.gradle' using SubsetScriptTransformer. | |
| Compiling settings file '/build/picard-tools-2.23.8+dfsg/settings.gradle' using BuildScriptTransformer. | |
| Settings evaluated using settings file '/build/picard-tools-2.23.8+dfsg/settings.gradle'. | |
| Projects loaded. Root project using build file '/build/picard-tools-2.23.8+dfsg/build.gradle'. | |
| Included projects: [root project 'picard'] | |
| Keep-alive timer started | |
| Adding Debian repository to project 'picard' | |
| Parallel execution is an incubating feature. | |
| Evaluating root project 'picard' using build file '/build/picard-tools-2.23.8+dfsg/build.gradle'. | |
| Compiling build file '/build/picard-tools-2.23.8+dfsg/build.gradle' using SubsetScriptTransformer. | |
| Compiling build file '/build/picard-tools-2.23.8+dfsg/build.gradle' using BuildScriptTransformer. | |
| Starting process 'command 'dpkg-parsechangelog''. Working directory: /build/picard-tools-2.23.8+dfsg Command: dpkg-parsechangelog -S Version | |
| Successfully started process 'command 'dpkg-parsechangelog'' | |
| build for version:2.23.8 | |
| Creating new cache for metadata-2.36/module-metadata, path /build/picard-tools-2.23.8+dfsg/.gradle/caches/modules-2/metadata-2.36/module-metadata.bin, access org.gradle.cache.internal.DefaultCacheAccess@28745adf | |
| Loading the Maven rules... | |
| Replacing com.intel.gkl:gkl:jar:0.8.5 -> com.intel.gkl:gkl:jar:debian | |
| Replacing com.google.guava:guava:jar:15.0 -> com.google.guava:guava:jar:debian | |
| Passing through com.google.guava:guava-parent:jar:debian | |
| Passing through commons-io:commons-io:jar:debian | |
| Passing through org.apache.commons:commons-parent:jar:debian | |
| Passing through org.apache:apache:jar:debian | |
| Replacing org.apache.commons:commons-math3:jar:3.5 -> org.apache.commons:commons-math3:jar:debian | |
| Replacing org.apache.commons:commons-collections4:jar:4.3 -> org.apache.commons:commons-collections4:jar:debian | |
| Replacing commons-lang:commons-lang:jar:2.6 -> commons-lang:commons-lang:jar:debian | |
| Replacing com.github.samtools:htsjdk:jar:2.23.0 -> com.github.samtools:htsjdk:jar:debian | |
| Replacing org.broadinstitute:barclay:jar:3.0.0 -> org.broadinstitute:barclay:jar:debian | |
| Passing through org.apache.commons:commons-lang3:jar:debian | |
| Passing through org.jsr-305:jsr305:jar:0.x | |
| Passing through org.apache.commons:commons-jexl:jar:debian | |
| Passing through commons-logging:commons-logging:jar:debian | |
| Passing through org.xerial.snappy:snappy-java:jar:debian | |
| Passing through org.apache.commons:commons-compress:jar:debian | |
| Passing through org.tukaani:xz:jar:debian | |
| Passing through gov.nih.nlm.ncbi:ngs-java:jar:debian | |
| Passing through net.sf.jopt-simple:jopt-simple:jar:debian | |
| Passing through org.apache.logging.log4j:log4j-api:jar:debian | |
| Passing through org.apache.logging.log4j:log4j:jar:debian | |
| Passing through org.apache.logging.log4j:log4j-core:jar:debian | |
| Passing through com.google.code.gson:gson:jar:debian | |
| Passing through com.google.code.gson:gson-parent:jar:debian | |
| Passing through org.freemarker:freemarker:jar:debian | |
| Adding Maven pom generation to project 'picard' | |
| Linking the generated javadoc to the system JDK API documentation | |
| FAILURE: Build failed with an exception. | |
| * Where: | |
| Build file '/build/picard-tools-2.23.8+dfsg/build.gradle' line: 178 | |
| * What went wrong: | |
| A problem occurred evaluating root project 'picard'. | |
| > Could not resolve all files for configuration ':compileClasspath'. | |
| > Could not resolve com.intel.gkl:gkl:0.8.5. | |
| Required by: | |
| project : | |
| > No cached version of com.intel.gkl:gkl:0.8.5 available for offline mode. | |
| > No cached version of com.intel.gkl:gkl:0.8.5 available for offline mode. | |
| * Try: | |
| Run with --debug option to get more log output. Run with --scan to get full insights. | |
| * Exception is: | |
| org.gradle.api.GradleScriptException: A problem occurred evaluating root project 'picard'. | |
| at org.gradle.groovy.scripts.internal.DefaultScriptRunnerFactory$ScriptRunnerImpl.run(DefaultScriptRunnerFactory.java:92) | |
| at org.gradle.configuration.DefaultScriptPluginFactory$ScriptPluginImpl$2.run(DefaultScriptPluginFactory.java:199) | |
| at org.gradle.configuration.ProjectScriptTarget.addConfiguration(ProjectScriptTarget.java:77) | |
| at org.gradle.configuration.DefaultScriptPluginFactory$ScriptPluginImpl.apply(DefaultScriptPluginFactory.java:204) | |
| at org.gradle.configuration.BuildOperationScriptPlugin$1.run(BuildOperationScriptPlugin.java:61) | |
| at org.gradle.internal.progress.DefaultBuildOperationExecutor$RunnableBuildOperationWorker.execute(DefaultBuildOperationExecutor.java:336) | |
| at org.gradle.internal.progress.DefaultBuildOperationExecutor$RunnableBuildOperationWorker.execute(DefaultBuildOperationExecutor.java:328) | |
| at org.gradle.internal.progress.DefaultBuildOperationExecutor.execute(DefaultBuildOperationExecutor.java:199) | |
| at org.gradle.internal.progress.DefaultBuildOperationExecutor.run(DefaultBuildOperationExecutor.java:110) | |
| at org.gradle.configuration.BuildOperationScriptPlugin.apply(BuildOperationScriptPlugin.java:58) | |
| at org.gradle.configuration.project.BuildScriptProcessor.execute(BuildScriptProcessor.java:41) | |
| at org.gradle.configuration.project.BuildScriptProcessor.execute(BuildScriptProcessor.java:26) | |
| at org.gradle.configuration.project.ConfigureActionsProjectEvaluator.evaluate(ConfigureActionsProjectEvaluator.java:34) | |
| at org.gradle.configuration.project.LifecycleProjectEvaluator.doConfigure(LifecycleProjectEvaluator.java:64) | |
| at org.gradle.configuration.project.LifecycleProjectEvaluator.access$100(LifecycleProjectEvaluator.java:34) | |
| at org.gradle.configuration.project.LifecycleProjectEvaluator$ConfigureProject.run(LifecycleProjectEvaluator.java:110) | |
| at org.gradle.internal.progress.DefaultBuildOperationExecutor$RunnableBuildOperationWorker.execute(DefaultBuildOperationExecutor.java:336) | |
| at org.gradle.internal.progress.DefaultBuildOperationExecutor$RunnableBuildOperationWorker.execute(DefaultBuildOperationExecutor.java:328) | |
| at org.gradle.internal.progress.DefaultBuildOperationExecutor.execute(DefaultBuildOperationExecutor.java:199) | |
| at org.gradle.internal.progress.DefaultBuildOperationExecutor.run(DefaultBuildOperationExecutor.java:110) | |
| at org.gradle.configuration.project.LifecycleProjectEvaluator.evaluate(LifecycleProjectEvaluator.java:50) | |
| at org.gradle.api.internal.project.DefaultProject.evaluate(DefaultProject.java:666) | |
| at org.gradle.api.internal.project.DefaultProject.evaluate(DefaultProject.java:135) | |
| at org.gradle.execution.TaskPathProjectEvaluator.configure(TaskPathProjectEvaluator.java:35) | |
| at org.gradle.execution.TaskPathProjectEvaluator.configureHierarchy(TaskPathProjectEvaluator.java:60) | |
| at org.gradle.configuration.DefaultBuildConfigurer.configure(DefaultBuildConfigurer.java:38) | |
| at org.gradle.initialization.DefaultGradleLauncher$ConfigureBuild.run(DefaultGradleLauncher.java:249) | |
| at org.gradle.internal.progress.DefaultBuildOperationExecutor$RunnableBuildOperationWorker.execute(DefaultBuildOperationExecutor.java:336) | |
| at org.gradle.internal.progress.DefaultBuildOperationExecutor$RunnableBuildOperationWorker.execute(DefaultBuildOperationExecutor.java:328) | |
| at org.gradle.internal.progress.DefaultBuildOperationExecutor.execute(DefaultBuildOperationExecutor.java:199) | |
| at org.gradle.internal.progress.DefaultBuildOperationExecutor.run(DefaultBuildOperationExecutor.java:110) | |
| at org.gradle.initialization.DefaultGradleLauncher.configureBuild(DefaultGradleLauncher.java:167) | |
| at org.gradle.initialization.DefaultGradleLauncher.doBuildStages(DefaultGradleLauncher.java:126) | |
| at org.gradle.initialization.DefaultGradleLauncher.executeTasks(DefaultGradleLauncher.java:109) | |
| at org.gradle.internal.invocation.GradleBuildController$1.call(GradleBuildController.java:78) | |
| at org.gradle.internal.invocation.GradleBuildController$1.call(GradleBuildController.java:75) | |
| at org.gradle.internal.work.DefaultWorkerLeaseService.withLocks(DefaultWorkerLeaseService.java:152) | |
| at org.gradle.internal.invocation.GradleBuildController.doBuild(GradleBuildController.java:100) | |
| at org.gradle.internal.invocation.GradleBuildController.run(GradleBuildController.java:75) | |
| at org.gradle.tooling.internal.provider.ExecuteBuildActionRunner.run(ExecuteBuildActionRunner.java:28) | |
| at org.gradle.launcher.exec.ChainingBuildActionRunner.run(ChainingBuildActionRunner.java:35) | |
| at org.gradle.tooling.internal.provider.ValidatingBuildActionRunner.run(ValidatingBuildActionRunner.java:32) | |
| at org.gradle.launcher.exec.RunAsBuildOperationBuildActionRunner$1.run(RunAsBuildOperationBuildActionRunner.java:43) | |
| at org.gradle.internal.progress.DefaultBuildOperationExecutor$RunnableBuildOperationWorker.execute(DefaultBuildOperationExecutor.java:336) | |
| at org.gradle.internal.progress.DefaultBuildOperationExecutor$RunnableBuildOperationWorker.execute(DefaultBuildOperationExecutor.java:328) | |
| at org.gradle.internal.progress.DefaultBuildOperationExecutor.execute(DefaultBuildOperationExecutor.java:199) | |
| at org.gradle.internal.progress.DefaultBuildOperationExecutor.run(DefaultBuildOperationExecutor.java:110) | |
| at org.gradle.launcher.exec.RunAsBuildOperationBuildActionRunner.run(RunAsBuildOperationBuildActionRunner.java:40) | |
| at org.gradle.tooling.internal.provider.SubscribableBuildActionRunner.run(SubscribableBuildActionRunner.java:51) | |
| at org.gradle.launcher.exec.InProcessBuildActionExecuter.execute(InProcessBuildActionExecuter.java:47) | |
| at org.gradle.launcher.exec.InProcessBuildActionExecuter.execute(InProcessBuildActionExecuter.java:30) | |
| at org.gradle.launcher.exec.BuildTreeScopeBuildActionExecuter.execute(BuildTreeScopeBuildActionExecuter.java:39) | |
| at org.gradle.launcher.exec.BuildTreeScopeBuildActionExecuter.execute(BuildTreeScopeBuildActionExecuter.java:25) | |
| at org.gradle.tooling.internal.provider.ContinuousBuildActionExecuter.execute(ContinuousBuildActionExecuter.java:80) | |
| at org.gradle.tooling.internal.provider.ContinuousBuildActionExecuter.execute(ContinuousBuildActionExecuter.java:53) | |
| at org.gradle.tooling.internal.provider.ServicesSetupBuildActionExecuter.execute(ServicesSetupBuildActionExecuter.java:57) | |
| at org.gradle.tooling.internal.provider.ServicesSetupBuildActionExecuter.execute(ServicesSetupBuildActionExecuter.java:32) | |
| at org.gradle.tooling.internal.provider.GradleThreadBuildActionExecuter.execute(GradleThreadBuildActionExecuter.java:36) | |
| at org.gradle.tooling.internal.provider.GradleThreadBuildActionExecuter.execute(GradleThreadBuildActionExecuter.java:25) | |
| at org.gradle.tooling.internal.provider.ParallelismConfigurationBuildActionExecuter.execute(ParallelismConfigurationBuildActionExecuter.java:43) | |
| at org.gradle.tooling.internal.provider.ParallelismConfigurationBuildActionExecuter.execute(ParallelismConfigurationBuildActionExecuter.java:29) | |
| at org.gradle.tooling.internal.provider.StartParamsValidatingActionExecuter.execute(StartParamsValidatingActionExecuter.java:69) | |
| at org.gradle.tooling.internal.provider.StartParamsValidatingActionExecuter.execute(StartParamsValidatingActionExecuter.java:30) | |
| at org.gradle.tooling.internal.provider.SessionFailureReportingActionExecuter.execute(SessionFailureReportingActionExecuter.java:59) | |
| at org.gradle.tooling.internal.provider.SessionFailureReportingActionExecuter.execute(SessionFailureReportingActionExecuter.java:44) | |
| at org.gradle.tooling.internal.provider.SetupLoggingActionExecuter.execute(SetupLoggingActionExecuter.java:45) | |
| at org.gradle.tooling.internal.provider.SetupLoggingActionExecuter.execute(SetupLoggingActionExecuter.java:30) | |
| at org.gradle.launcher.daemon.server.exec.ExecuteBuild.doBuild(ExecuteBuild.java:67) | |
| at org.gradle.launcher.daemon.server.exec.BuildCommandOnly.execute(BuildCommandOnly.java:36) | |
| at org.gradle.launcher.daemon.server.api.DaemonCommandExecution.proceed(DaemonCommandExecution.java:122) | |
| at org.gradle.launcher.daemon.server.exec.WatchForDisconnection.execute(WatchForDisconnection.java:37) | |
| at org.gradle.launcher.daemon.server.api.DaemonCommandExecution.proceed(DaemonCommandExecution.java:122) | |
| at org.gradle.launcher.daemon.server.exec.ResetDeprecationLogger.execute(ResetDeprecationLogger.java:26) | |
| at org.gradle.launcher.daemon.server.api.DaemonCommandExecution.proceed(DaemonCommandExecution.java:122) | |
| at org.gradle.launcher.daemon.server.exec.RequestStopIfSingleUsedDaemon.execute(RequestStopIfSingleUsedDaemon.java:34) | |
| at org.gradle.launcher.daemon.server.api.DaemonCommandExecution.proceed(DaemonCommandExecution.java:122) | |
| at org.gradle.launcher.daemon.server.exec.ForwardClientInput$2.call(ForwardClientInput.java:74) | |
| at org.gradle.launcher.daemon.server.exec.ForwardClientInput$2.call(ForwardClientInput.java:72) | |
| at org.gradle.util.Swapper.swap(Swapper.java:38) | |
| at org.gradle.launcher.daemon.server.exec.ForwardClientInput.execute(ForwardClientInput.java:72) | |
| at org.gradle.launcher.daemon.server.api.DaemonCommandExecution.proceed(DaemonCommandExecution.java:122) | |
| at org.gradle.launcher.daemon.server.exec.LogAndCheckHealth.execute(LogAndCheckHealth.java:50) | |
| at org.gradle.launcher.daemon.server.api.DaemonCommandExecution.proceed(DaemonCommandExecution.java:122) | |
| at org.gradle.launcher.daemon.server.exec.LogToClient.doBuild(LogToClient.java:62) | |
| at org.gradle.launcher.daemon.server.exec.BuildCommandOnly.execute(BuildCommandOnly.java:36) | |
| at org.gradle.launcher.daemon.server.api.DaemonCommandExecution.proceed(DaemonCommandExecution.java:122) | |
| at org.gradle.launcher.daemon.server.exec.EstablishBuildEnvironment.doBuild(EstablishBuildEnvironment.java:82) | |
| at org.gradle.launcher.daemon.server.exec.BuildCommandOnly.execute(BuildCommandOnly.java:36) | |
| at org.gradle.launcher.daemon.server.api.DaemonCommandExecution.proceed(DaemonCommandExecution.java:122) | |
| at org.gradle.launcher.daemon.server.exec.StartBuildOrRespondWithBusy$1.run(StartBuildOrRespondWithBusy.java:50) | |
| at org.gradle.launcher.daemon.server.DaemonStateCoordinator$1.run(DaemonStateCoordinator.java:295) | |
| at org.gradle.internal.concurrent.ExecutorPolicy$CatchAndRecordFailures.onExecute(ExecutorPolicy.java:63) | |
| at org.gradle.internal.concurrent.ManagedExecutorImpl$1.run(ManagedExecutorImpl.java:46) | |
| at org.gradle.internal.concurrent.ThreadFactoryImpl$ManagedThreadRunnable.run(ThreadFactoryImpl.java:55) | |
| Caused by: org.gradle.api.internal.artifacts.ivyservice.DefaultLenientConfiguration$ArtifactResolveException: Could not resolve all files for configuration ':compileClasspath'. | |
| at org.gradle.api.internal.artifacts.configurations.DefaultConfiguration.rethrowFailure(DefaultConfiguration.java:918) | |
| at org.gradle.api.internal.artifacts.configurations.DefaultConfiguration.access$1600(DefaultConfiguration.java:116) | |
| at org.gradle.api.internal.artifacts.configurations.DefaultConfiguration$ConfigurationFileCollection.getFiles(DefaultConfiguration.java:892) | |
| at org.gradle.api.internal.artifacts.configurations.DefaultConfiguration.getFiles(DefaultConfiguration.java:404) | |
| at org.gradle.api.internal.artifacts.configurations.DefaultConfiguration_Decorated.getFiles(Unknown Source) | |
| at org.gradle.api.internal.file.CompositeFileCollection.getFiles(CompositeFileCollection.java:56) | |
| at org.gradle.api.internal.file.AbstractFileCollection.asType(AbstractFileCollection.java:163) | |
| at org.gradle.api.file.FileCollection$asType$0.call(Unknown Source) | |
| at build_5u2xfwr9avm9dd5p44h11obt8$_run_closure8.doCall(/build/picard-tools-2.23.8+dfsg/build.gradle:178) | |
| at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at org.gradle.api.internal.ClosureBackedAction.execute(ClosureBackedAction.java:71) | |
| at org.gradle.util.ConfigureUtil.configureTarget(ConfigureUtil.java:160) | |
| at org.gradle.util.ConfigureUtil.configureSelf(ConfigureUtil.java:136) | |
| at org.gradle.api.internal.AbstractTask.configure(AbstractTask.java:634) | |
| at org.gradle.api.internal.project.DefaultProject.task(DefaultProject.java:1208) | |
| at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at org.gradle.internal.metaobject.BeanDynamicObject$MetaClassAdapter.invokeMethod(BeanDynamicObject.java:479) | |
| at org.gradle.internal.metaobject.BeanDynamicObject.tryInvokeMethod(BeanDynamicObject.java:191) | |
| at org.gradle.internal.metaobject.CompositeDynamicObject.tryInvokeMethod(CompositeDynamicObject.java:98) | |
| at org.gradle.internal.metaobject.MixInClosurePropertiesAsMethodsDynamicObject.tryInvokeMethod(MixInClosurePropertiesAsMethodsDynamicObject.java:30) | |
| at org.gradle.groovy.scripts.BasicScript$ScriptDynamicObject.tryInvokeMethod(BasicScript.java:134) | |
| at org.gradle.internal.metaobject.AbstractDynamicObject.invokeMethod(AbstractDynamicObject.java:160) | |
| at org.gradle.groovy.scripts.BasicScript.invokeMethod(BasicScript.java:83) | |
| at build_5u2xfwr9avm9dd5p44h11obt8.run(/build/picard-tools-2.23.8+dfsg/build.gradle:156) | |
| at org.gradle.groovy.scripts.internal.DefaultScriptRunnerFactory$ScriptRunnerImpl.run(DefaultScriptRunnerFactory.java:90) | |
| ... 93 more | |
| Caused by: org.gradle.internal.resolve.ModuleVersionResolveException: Could not resolve com.intel.gkl:gkl:0.8.5. | |
| Required by: | |
| project : | |
| at org.gradle.api.internal.artifacts.ivyservice.ivyresolve.RepositoryChainComponentMetaDataResolver.resolveModule(RepositoryChainComponentMetaDataResolver.java:103) | |
| at org.gradle.api.internal.artifacts.ivyservice.ivyresolve.RepositoryChainComponentMetaDataResolver.resolve(RepositoryChainComponentMetaDataResolver.java:63) | |
| at org.gradle.api.internal.artifacts.ivyservice.resolveengine.ComponentResolversChain$ComponentMetaDataResolverChain.resolve(ComponentResolversChain.java:93) | |
| at org.gradle.api.internal.artifacts.ivyservice.clientmodule.ClientModuleResolver.resolve(ClientModuleResolver.java:48) | |
| at org.gradle.api.internal.artifacts.ivyservice.resolveengine.graph.builder.ComponentState.resolve(ComponentState.java:157) | |
| at org.gradle.api.internal.artifacts.ivyservice.resolveengine.graph.builder.ComponentState.getMetaData(ComponentState.java:168) | |
| at org.gradle.api.internal.artifacts.ivyservice.resolveengine.graph.builder.EdgeState.calculateTargetConfigurations(EdgeState.java:134) | |
| at org.gradle.api.internal.artifacts.ivyservice.resolveengine.graph.builder.EdgeState.attachToTargetConfigurations(EdgeState.java:105) | |
| at org.gradle.api.internal.artifacts.ivyservice.resolveengine.graph.builder.DependencyGraphBuilder.attachToTargetRevisionsSerially(DependencyGraphBuilder.java:239) | |
| at org.gradle.api.internal.artifacts.ivyservice.resolveengine.graph.builder.DependencyGraphBuilder.resolveEdges(DependencyGraphBuilder.java:229) | |
| at org.gradle.api.internal.artifacts.ivyservice.resolveengine.graph.builder.DependencyGraphBuilder.traverseGraph(DependencyGraphBuilder.java:143) | |
| at org.gradle.api.internal.artifacts.ivyservice.resolveengine.graph.builder.DependencyGraphBuilder.resolve(DependencyGraphBuilder.java:109) | |
| at org.gradle.api.internal.artifacts.ivyservice.resolveengine.DefaultArtifactDependencyResolver.resolve(DefaultArtifactDependencyResolver.java:90) | |
| at org.gradle.api.internal.artifacts.ivyservice.DefaultConfigurationResolver.resolveGraph(DefaultConfigurationResolver.java:146) | |
| at org.gradle.api.internal.artifacts.ivyservice.ShortCircuitEmptyConfigurationResolver.resolveGraph(ShortCircuitEmptyConfigurationResolver.java:73) | |
| at org.gradle.api.internal.artifacts.ivyservice.ErrorHandlingConfigurationResolver.resolveGraph(ErrorHandlingConfigurationResolver.java:66) | |
| at org.gradle.api.internal.artifacts.configurations.DefaultConfiguration$4.run(DefaultConfiguration.java:483) | |
| at org.gradle.internal.progress.DefaultBuildOperationExecutor$RunnableBuildOperationWorker.execute(DefaultBuildOperationExecutor.java:336) | |
| at org.gradle.internal.progress.DefaultBuildOperationExecutor$RunnableBuildOperationWorker.execute(DefaultBuildOperationExecutor.java:328) | |
| at org.gradle.internal.progress.DefaultBuildOperationExecutor.execute(DefaultBuildOperationExecutor.java:199) | |
| at org.gradle.internal.progress.DefaultBuildOperationExecutor.run(DefaultBuildOperationExecutor.java:110) | |
| at org.gradle.api.internal.artifacts.configurations.DefaultConfiguration.resolveGraphIfRequired(DefaultConfiguration.java:474) | |
| at org.gradle.api.internal.artifacts.configurations.DefaultConfiguration.resolveToStateOrLater(DefaultConfiguration.java:459) | |
| at org.gradle.api.internal.artifacts.configurations.DefaultConfiguration.access$1700(DefaultConfiguration.java:116) | |
| at org.gradle.api.internal.artifacts.configurations.DefaultConfiguration$ConfigurationFileCollection.getSelectedArtifacts(DefaultConfiguration.java:901) | |
| at org.gradle.api.internal.artifacts.configurations.DefaultConfiguration$ConfigurationFileCollection.getFiles(DefaultConfiguration.java:889) | |
| ... 119 more | |
| Caused by: org.gradle.internal.resolve.ModuleVersionResolveException: No cached version of com.intel.gkl:gkl:0.8.5 available for offline mode. | |
| at org.gradle.api.internal.artifacts.ivyservice.ivyresolve.StartParameterResolutionOverride$FailedRemoteAccess.resolveComponentMetaData(StartParameterResolutionOverride.java:129) | |
| at org.gradle.api.internal.artifacts.ivyservice.ivyresolve.CachingModuleComponentRepository$ResolveAndCacheRepositoryAccess.resolveComponentMetaData(CachingModuleComponentRepository.java:363) | |
| at org.gradle.api.internal.artifacts.ivyservice.ivyresolve.BaseModuleComponentRepositoryAccess.resolveComponentMetaData(BaseModuleComponentRepositoryAccess.java:50) | |
| at org.gradle.api.internal.artifacts.ivyservice.ivyresolve.memcache.InMemoryCachedModuleComponentRepository$CachedAccess.resolveComponentMetaData(InMemoryCachedModuleComponentRepository.java:95) | |
| at org.gradle.api.internal.artifacts.ivyservice.ivyresolve.ErrorHandlingModuleComponentRepository$ErrorHandlingModuleComponentRepositoryAccess.resolveComponentMetaData(ErrorHandlingModuleComponentRepository.java:126) | |
| at org.gradle.api.internal.artifacts.ivyservice.ivyresolve.ComponentMetaDataResolveState.process(ComponentMetaDataResolveState.java:66) | |
| at org.gradle.api.internal.artifacts.ivyservice.ivyresolve.ComponentMetaDataResolveState.resolve(ComponentMetaDataResolveState.java:58) | |
| at org.gradle.api.internal.artifacts.ivyservice.ivyresolve.RepositoryChainComponentMetaDataResolver.findBestMatch(RepositoryChainComponentMetaDataResolver.java:138) | |
| at org.gradle.api.internal.artifacts.ivyservice.ivyresolve.RepositoryChainComponentMetaDataResolver.findBestMatch(RepositoryChainComponentMetaDataResolver.java:119) | |
| at org.gradle.api.internal.artifacts.ivyservice.ivyresolve.RepositoryChainComponentMetaDataResolver.resolveModule(RepositoryChainComponentMetaDataResolver.java:92) | |
| ... 144 more | |
| * Get more help at https://help.gradle.org | |
| BUILD FAILED in 38s | |
| dh_auto_build: error: gradle --info --console plain --offline --stacktrace --no-daemon --refresh-dependencies --gradle-user-home .gradle -Duser.home=. -Duser.name=debian -Ddebian.package=picard-tools -Dfile.encoding=UTF-8 --parallel --max-workers=8 jar javadoc returned exit code 1 | |
| make[1]: *** [debian/rules:18: override_dh_auto_build] Error 25 | |
| make[1]: Leaving directory '/build/picard-tools-2.23.8+dfsg' | |
| make: *** [debian/rules:10: binary] Error 2 | |
| dpkg-buildpackage: error: debian/rules binary subprocess returned exit status 2 | |
| [0mI: copying local configuration[0m | |
| [0;31mE: Failed autobuilding of package[0m | |
| [0mI: user script /var/cache/pbuilder/build/cow.2184291/tmp/hooks/C10shell starting[0m | |
| Reading package lists... | |
| Building dependency tree... | |
| Reading state information... | |
| The following additional packages will be installed: | |
| libcanberra0 libgpm2 libltdl7 libogg0 libtdb1 libvorbis0a libvorbisfile3 | |
| sound-theme-freedesktop vim-runtime | |
| Suggested packages: | |
| libcanberra-gtk0 libcanberra-pulse gpm ctags vim-doc vim-scripts | |
| The following NEW packages will be installed: | |
| less libcanberra0 libgpm2 libltdl7 libogg0 libtdb1 libvorbis0a | |
| libvorbisfile3 sound-theme-freedesktop vim vim-runtime | |
| 0 upgraded, 11 newly installed, 0 to remove and 0 not upgraded. | |
| Need to get 8254 kB/8662 kB of archives. | |
| After this operation, 37.8 MB of additional disk space will be used. | |
| Get:1 http://deb.debian.org/debian sid/main arm64 less arm64 551-2 [129 kB] | |
| Get:2 http://deb.debian.org/debian sid/main arm64 libtdb1 arm64 1.4.3-1 [48.3 kB] | |
| Get:3 http://deb.debian.org/debian sid/main arm64 libvorbis0a arm64 1.3.7-1 [86.2 kB] | |
| Get:4 http://deb.debian.org/debian sid/main arm64 libvorbisfile3 arm64 1.3.7-1 [25.4 kB] | |
| Get:5 http://deb.debian.org/debian sid/main arm64 sound-theme-freedesktop all 0.8-2 [384 kB] | |
| Get:6 http://deb.debian.org/debian sid/main arm64 libcanberra0 arm64 0.30-7 [37.3 kB] | |
| Get:7 http://deb.debian.org/debian sid/main arm64 libgpm2 arm64 1.20.7-6 [35.4 kB] | |
| Get:8 http://deb.debian.org/debian sid/main arm64 vim-runtime all 2:8.2.1913-1 [6151 kB] | |
| Get:9 http://deb.debian.org/debian sid/main arm64 vim arm64 2:8.2.1913-1+b1 [1357 kB] | |
| debconf: delaying package configuration, since apt-utils is not installed | |
| Fetched 8254 kB in 2s (4299 kB/s) | |
| Selecting previously unselected package less. | |
| (Reading database ... | |
| (Reading database ... 5% | |
| (Reading database ... 10% | |
| (Reading database ... 15% | |
| (Reading database ... 20% | |
| (Reading database ... 25% | |
| (Reading database ... 30% | |
| (Reading database ... 35% | |
| (Reading database ... 40% | |
| (Reading database ... 45% | |
| (Reading database ... 50% | |
| (Reading database ... 55% | |
| (Reading database ... 60% | |
| (Reading database ... 65% | |
| (Reading database ... 70% | |
| (Reading database ... 75% | |
| (Reading database ... 80% | |
| (Reading database ... 85% | |
| (Reading database ... 90% | |
| (Reading database ... 95% | |
| (Reading database ... 100% | |
| (Reading database ... 37382 files and directories currently installed.) | |
| Preparing to unpack .../00-less_551-2_arm64.deb ... | |
| Unpacking less (551-2) ... | |
| Selecting previously unselected package libltdl7:arm64. | |
| Preparing to unpack .../01-libltdl7_2.4.6-14_arm64.deb ... | |
| Unpacking libltdl7:arm64 (2.4.6-14) ... | |
| Selecting previously unselected package libtdb1:arm64. | |
| Preparing to unpack .../02-libtdb1_1.4.3-1_arm64.deb ... | |
| Unpacking libtdb1:arm64 (1.4.3-1) ... | |
| Selecting previously unselected package libogg0:arm64. | |
| Preparing to unpack .../03-libogg0_1.3.2-1+b1_arm64.deb ... | |
| Unpacking libogg0:arm64 (1.3.2-1+b1) ... | |
| Selecting previously unselected package libvorbis0a:arm64. | |
| Preparing to unpack .../04-libvorbis0a_1.3.7-1_arm64.deb ... | |
| Unpacking libvorbis0a:arm64 (1.3.7-1) ... | |
| Selecting previously unselected package libvorbisfile3:arm64. | |
| Preparing to unpack .../05-libvorbisfile3_1.3.7-1_arm64.deb ... | |
| Unpacking libvorbisfile3:arm64 (1.3.7-1) ... | |
| Selecting previously unselected package sound-theme-freedesktop. | |
| Preparing to unpack .../06-sound-theme-freedesktop_0.8-2_all.deb ... | |
| Unpacking sound-theme-freedesktop (0.8-2) ... | |
| Selecting previously unselected package libcanberra0:arm64. | |
| Preparing to unpack .../07-libcanberra0_0.30-7_arm64.deb ... | |
| Unpacking libcanberra0:arm64 (0.30-7) ... | |
| Selecting previously unselected package libgpm2:arm64. | |
| Preparing to unpack .../08-libgpm2_1.20.7-6_arm64.deb ... | |
| Unpacking libgpm2:arm64 (1.20.7-6) ... | |
| Selecting previously unselected package vim-runtime. | |
| Preparing to unpack .../09-vim-runtime_2%3a8.2.1913-1_all.deb ... | |
| Adding 'diversion of /usr/share/vim/vim82/doc/help.txt to /usr/share/vim/vim82/doc/help.txt.vim-tiny by vim-runtime' | |
| Adding 'diversion of /usr/share/vim/vim82/doc/tags to /usr/share/vim/vim82/doc/tags.vim-tiny by vim-runtime' | |
| Unpacking vim-runtime (2:8.2.1913-1) ... | |
| Selecting previously unselected package vim. | |
| Preparing to unpack .../10-vim_2%3a8.2.1913-1+b1_arm64.deb ... | |
| Unpacking vim (2:8.2.1913-1+b1) ... | |
| Setting up libgpm2:arm64 (1.20.7-6) ... | |
| Setting up libogg0:arm64 (1.3.2-1+b1) ... | |
| Setting up libtdb1:arm64 (1.4.3-1) ... | |
| Setting up less (551-2) ... | |
| Setting up libvorbis0a:arm64 (1.3.7-1) ... | |
| Setting up libltdl7:arm64 (2.4.6-14) ... | |
| Setting up sound-theme-freedesktop (0.8-2) ... | |
| Setting up vim-runtime (2:8.2.1913-1) ... | |
| Setting up libvorbisfile3:arm64 (1.3.7-1) ... | |
| Setting up libcanberra0:arm64 (0.30-7) ... | |
| Setting up vim (2:8.2.1913-1+b1) ... | |
| update-alternatives: using /usr/bin/vim.basic to provide /usr/bin/vim (vim) in auto mode | |
| update-alternatives: using /usr/bin/vim.basic to provide /usr/bin/vimdiff (vimdiff) in auto mode | |
| update-alternatives: using /usr/bin/vim.basic to provide /usr/bin/rvim (rvim) in auto mode | |
| update-alternatives: using /usr/bin/vim.basic to provide /usr/bin/rview (rview) in auto mode | |
| update-alternatives: using /usr/bin/vim.basic to provide /usr/bin/vi (vi) in auto mode | |
| update-alternatives: using /usr/bin/vim.basic to provide /usr/bin/view (view) in auto mode | |
| update-alternatives: using /usr/bin/vim.basic to provide /usr/bin/ex (ex) in auto mode | |
| update-alternatives: using /usr/bin/vim.basic to provide /usr/bin/editor (editor) in auto mode | |
| Processing triggers for man-db (2.9.3-2) ... | |
| Not building database; man-db/auto-update is not 'true'. | |
| Processing triggers for mailcap (3.67) ... | |
| Processing triggers for libc-bin (2.31-4) ... | |
| [0mI: user script /var/cache/pbuilder/build/cow.2184291/tmp/hooks/C10shell finished[0m | |
| [0mI: unmounting /home/michael/.ccache/ filesystem[0m | |
| [0mI: unmounting dev/ptmx filesystem[0m | |
| [0mI: unmounting dev/pts filesystem[0m | |
| [0mI: unmounting dev/shm filesystem[0m | |
| [0mI: unmounting proc filesystem[0m | |
| [0mI: unmounting sys filesystem[0m |
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