Last active
September 22, 2022 12:07
-
-
Save mrklein/dc19fbac73564dabdba2 to your computer and use it in GitHub Desktop.
Read, cut and plot VTK file with python-vtk and matplotlib
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
%matplotlib inline | |
filename = 'vtk-plot_0.vtk' | |
import vtk | |
from numpy import zeros | |
import matplotlib.pyplot as plt | |
reader = vtk.vtkUnstructuredGridReader() | |
reader.SetFileName(filename) | |
reader.Update() | |
plane = vtk.vtkPlane() | |
plane.SetOrigin(0, 0, 0.5) | |
plane.SetNormal(0, 0, 1) | |
cutter = vtk.vtkFiltersCorePython.vtkCutter() | |
cutter.SetCutFunction(plane) | |
cutter.SetInputConnection(reader.GetOutputPort()) | |
cutter.Update() | |
data = cutter.GetOutput() | |
triangles = data.GetPolys().GetData() | |
points = data.GetPoints() | |
mapper = vtk.vtkCellDataToPointData() | |
mapper.AddInputData(data) | |
mapper.Update() | |
vels = mapper.GetOutput().GetPointData().GetArray(1) | |
ntri = triangles.GetNumberOfTuples()/4 | |
npts = points.GetNumberOfPoints() | |
nvls = vels.GetNumberOfTuples() | |
tri = zeros((ntri, 3)) | |
x = zeros(npts) | |
y = zeros(npts) | |
ux = zeros(nvls) | |
uy = zeros(nvls) | |
for i in xrange(0, ntri): | |
tri[i, 0] = triangles.GetTuple(4*i + 1)[0] | |
tri[i, 1] = triangles.GetTuple(4*i + 2)[0] | |
tri[i, 2] = triangles.GetTuple(4*i + 3)[0] | |
for i in xrange(npts): | |
pt = points.GetPoint(i) | |
x[i] = pt[0] | |
y[i] = pt[1] | |
for i in xrange(0, nvls): | |
U = vels.GetTuple(i) | |
ux[i] = U[0] | |
uy[i] = U[1] | |
# Mesh | |
plt.figure(figsize=(8, 8)) | |
plt.triplot(x, y, tri) | |
plt.gca().set_aspect('equal') | |
# Velocity x-component | |
plt.figure(figsize=(8, 8)) | |
plt.tricontourf(x, y, tri, ux, 16) | |
plt.tricontour(x, y, tri, ux, 16) |
Author
mrklein
commented
Nov 3, 2015
The libvtk dependency is quite big; you might want to check out meshio (a project of mine). Should definitely make your code shorter.
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment