Wei Ouyang oeway

I am working with Deep Learning based image analysis and modeling, excited about biology, deep neural nets, open source, Python and JavaScript.

oeway / PythonPlugin.imjoy.html

Last active June 30, 2023 01:30

Read image file with Pyodide in ImJoy

	<docs lang="markdown">
	[TODO: write documentation for this plugin.]
	</docs>

	<config lang="json">
	{
	"name": "PythonPlugin",
	"type": "web-python",
	"version": "0.1.0",
	"description": "[TODO: describe this plugin with one sentence.]",

oeway / N2V-Fiji-Demo.imjoy.html

Created July 20, 2021 16:13

	<docs lang="markdown">
	## PyImageJ demo

	A PyImageJ demo ported from https://github.com/imagej/pyimagej

	</docs>

	<config lang="json">
	{
	"name": "N2V-Fiji-Demo",

oeway / DownloadFileWebPython.imjoy.html

Created July 13, 2021 15:09

	<docs lang="markdown">
	[TODO: write documentation for this plugin.]
	</docs>

	<config lang="json">
	{
	"name": "DownloadFileWebPython",
	"type": "web-python",
	"version": "0.1.0",
	"description": "[TODO: describe this plugin with one sentence.]",

oeway / ImageJ.JS-slides-for-OME-Meetings-2021.md

Last active May 25, 2021 19:25

ImageJ.JS: ImageJ in the browser

Wei OUYANG

Emma Lundberg Group @ KTH Royal Institute of Technology

oeway / HPACellAtlasImages.imjoy.html

Last active May 23, 2021 22:44

	<docs>
	# HPA Cell Atlas Images

	This plugin uses the virtual stack api of ImageJ.JS to display all the HPA Cell Atlas images (v18).
	</docs>

	<config lang="json">
	{
	"name": "HPACellAtlasImages",
	"type": "iframe",

oeway / imjoy-app-engine-demo.ipynb

Created May 20, 2021 12:55

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oeway / broadcastConnectionOnly.js

Last active May 16, 2021 14:06

Connecting to another ImJoy plugin in the same browser via broadcast channel and webRTC (only works with Chrome and FireFox)

	/**
	* Contains the routines loaded by the plugin iframe under web-browser
	* in case when worker failed to initialize
	*
	* Initializes the web environment version of the platform-dependent
	* connection object for the plugin site
	*/
	import { connectRPC } from "./pluginCore.js";
	import { RPC, API_VERSION } from "./rpc.js";
	import { MessageEmitter, randId, normalizeConfig } from "./utils.js";

oeway / cross-tab-webrtc.html

Created May 15, 2021 15:08

	<body>
	<button id="button" onclick="connect()">Connect</button>
	<div id="div"></div><input id="chat"></input><br>
	<script src="https://webrtc.github.io/adapter/adapter-latest.js"></script>
	<script>
	var pc = new RTCPeerConnection(), dc, enterPressed = e => e.keyCode == 13;

	var connect = () => init(dc = pc.createDataChannel("chat"));
	pc.ondatachannel = e => init(dc = e.channel);

oeway / HPA-UMAP-Nucleolus.imjoy.html

Created May 14, 2021 19:39

	<docs>
	[TODO: write documentation for this plugin.]
	</docs>

	<config lang="json">
	{
	"name": "HPA-UMAP-Nucleolus",
	"type": "web-worker",
	"tags": [],
	"ui": "",