rasterio test failures

rasterio-tests.txt

~/projects/rasterio[master]$ py.test
============================================================================= test session starts =============================================================================
platform darwin -- Python 2.7.5 -- py-1.4.20 -- pytest-2.5.2
collected 54 items 

rasterio/tests/test_band.py .
rasterio/tests/test_blocks.py ...........
rasterio/tests/test_colormap.py .
rasterio/tests/test_coords.py ....
rasterio/tests/test_copy.py .
rasterio/tests/test_driver_management.py ..
rasterio/tests/test_dtypes.py ...
rasterio/tests/test_features_rasterize.py ..
rasterio/tests/test_features_shapes.py ....
rasterio/tests/test_features_sieve.py .
rasterio/tests/test_read.py .......
rasterio/tests/test_revolvingdoor.py .
rasterio/tests/test_tags.py ..
rasterio/tests/test_update.py ...
rasterio/tests/test_warp.py FF..
rasterio/tests/test_write.py .......

================================================================================== FAILURES ===================================================================================
_______________________________________________________________________________ test_reproject ________________________________________________________________________________

    def test_reproject():
        """Ndarry to ndarray"""
        with rasterio.drivers():
            with rasterio.open('rasterio/tests/data/RGB.byte.tif') as src:
                source = src.read_band(1)
            dst_transform = [-8789636.708, 300.0, 0.0, 2943560.235, 0.0, -300.0]
            dst_crs = dict(
                        proj='merc',
                        a=6378137,
                        b=6378137,
                        lat_ts=0.0,
                        lon_0=0.0,
                        x_0=0.0,
                        y_0=0,
                        k=1.0,
                        units='m',
                        nadgrids='@null',
                        wktext=True,
                        no_defs=True)
            destin = numpy.empty(src.shape, dtype=numpy.uint8)
            reproject(
                source,
                destin,
                src_transform=src.transform,
                src_crs=src.crs,
                dst_transform=dst_transform,
                dst_crs=dst_crs,
                resampling=RESAMPLING.nearest )
>       assert destin.any()
E       assert <built-in method any of numpy.ndarray object at 0x7fb1e3236f70>()
E        +  where <built-in method any of numpy.ndarray object at 0x7fb1e3236f70> = array([[0, 0, 0, ..., 0, 0, 0],\n       [0, 0, 0, ..., 0, 0, 0],\n       [0, 0, ...,\n       [0, 0, 0, ..., 0, 0, 0],\n       [0, 0, 0, ..., 0, 0, 0]], dtype=uint8).any

rasterio/tests/test_warp.py:41: AssertionError
------------------------------------------------------------------------------- Captured stderr -------------------------------------------------------------------------------
DEBUG:rasterio:Creating a chief GDALEnv in drivers()
DEBUG:rasterio:Got coordinate system
DEBUG:rasterio:Params: +proj=utm +zone=18 +ellps=WGS84 +units=m +no_defs 
DEBUG:rasterio:Got coordinate system
DEBUG:rasterio:Created temp source dataset
DEBUG:rasterio:Set transform on temp source dataset: 0
DEBUG:rasterio:Set CRS on temp source dataset: 
DEBUG:rasterio:Got temp source band
DEBUG:rasterio:Wrote array to temp source dataset
DEBUG:rasterio:Created temp destination dataset
DEBUG:rasterio:Set transform on temp destination dataset: 0
DEBUG:rasterio:Proj4 string: +a=6378137 +lon_0=0.0 +k=1.0 +y_0=0 +nadgrids=@null +no_defs +proj=merc +x_0=0.0 +units=m +lat_ts=0.0 +b=6378137 +wktext
DEBUG:rasterio:Setting Projection: 0
DEBUG:rasterio:Set CRS on temp destination dataset: PROJCS["unnamed",GEOGCS["unnamed ellipse",DATUM["unknown",SPHEROID["unnamed",6378137,0],EXTENSION["PROJ4_GRIDS","@null"]],PRIMEM["Greenwich",0],UNIT["degree",0.0174532925199433]],PROJECTION["Mercator_2SP"],PARAMETER["standard_parallel_1",0],PARAMETER["central_meridian",0],PARAMETER["false_easting",0],PARAMETER["false_northing",0],UNIT["Meter",1],EXTENSION["PROJ4","+a=6378137 +lon_0=0.0 +k=1.0 +y_0=0 +nadgrids=@null +no_defs +proj=merc +x_0=0.0 +units=m +lat_ts=0.0 +b=6378137 +wktext"]]
DEBUG:rasterio:Created transformer
DEBUG:rasterio:Created warp options
DEBUG:rasterio:Set transformer options
DEBUG:rasterio:Chunk and warp window: 0, 0, 791, 718
ERROR:GDAL:CPLE_AppDefined in CPLCreateJoinableThread() failed in ChunkAndWarpMulti()
DEBUG:rasterio:Chunked and warped: 0
DEBUG:rasterio:Wrote data to destination: 0
_____________________________________________________________________________ test_warp_from_file _____________________________________________________________________________

    def test_warp_from_file():
        """File to ndarray"""
        with rasterio.open('rasterio/tests/data/RGB.byte.tif') as src:
            dst_transform = [-8789636.708, 300.0, 0.0, 2943560.235, 0.0, -300.0]
            dst_crs = dict(
                        proj='merc',
                        a=6378137,
                        b=6378137,
                        lat_ts=0.0,
                        lon_0=0.0,
                        x_0=0.0,
                        y_0=0,
                        k=1.0,
                        units='m',
                        nadgrids='@null',
                        wktext=True,
                        no_defs=True)
            destin = numpy.empty(src.shape, dtype=numpy.uint8)
            reproject(
                rasterio.band(src, 1),
                destin,
                dst_transform=dst_transform,
                dst_crs=dst_crs)
>       assert destin.any()
E       assert <built-in method any of numpy.ndarray object at 0x7fb1e0c85940>()
E        +  where <built-in method any of numpy.ndarray object at 0x7fb1e0c85940> = array([[0, 0, 0, ..., 0, 0, 0],\n       [0, 0, 0, ..., 0, 0, 0],\n       [0, 0, ...,\n       [0, 0, 0, ..., 0, 0, 0],\n       [0, 0, 0, ..., 0, 0, 0]], dtype=uint8).any

rasterio/tests/test_warp.py:73: AssertionError
------------------------------------------------------------------------------- Captured stderr -------------------------------------------------------------------------------
DEBUG:rasterio:Got coordinate system
DEBUG:rasterio:Params: +proj=utm +zone=18 +ellps=WGS84 +units=m +no_defs 
DEBUG:rasterio:Got coordinate system
DEBUG:rasterio:Created temp destination dataset
DEBUG:rasterio:Set transform on temp destination dataset: 0
DEBUG:rasterio:Proj4 string: +a=6378137 +lon_0=0.0 +k=1.0 +y_0=0 +nadgrids=@null +no_defs +proj=merc +x_0=0.0 +units=m +lat_ts=0.0 +b=6378137 +wktext
DEBUG:rasterio:Setting Projection: 0
DEBUG:rasterio:Set CRS on temp destination dataset: i}
                                                      �
DEBUG:rasterio:Created transformer
DEBUG:rasterio:Created warp options
DEBUG:rasterio:Set transformer options
DEBUG:rasterio:Chunk and warp window: 0, 0, 791, 718
ERROR 1: CPLCreateJoinableThread() failed in ChunkAndWarpMulti()
DEBUG:rasterio:Chunked and warped: 0
DEBUG:rasterio:Wrote data to destination: 0
===================================================================== 2 failed, 52 passed in 1.05 seconds =====================================================================

solved by building gdal with --with-threads=yes.

How can I add that argument in gentoo ebuild?

Solved: https://bpaste.net/show/a60bad593a79