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theosanderson/gist:7a86e3d3731031d59781997fc07f1a6b

Last active December 20, 2023 13:17
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GISAID extract from MSA archive
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gistfile1.txt
cat ~/Desktop/hCoV-19_msa_1125.tar.xz | xz -dT10 | tar -xJO msa_1125/msa_1125.fasta | pv -c | zstd -c > msa.fa.zst
cat ~/Desktop/metadata_tsv_2023_12_18.tar.xz | xz -dT10 | tar -xJO metadata.tsv | pv -c | zstd -c > metadata.tsv.zst
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