nanogem: minimal one-file Gemini 3.5 Flash coding agent

README.md

nanogem

Minimal one-file coding agent built on Bun and the Google Gen AI SDK with Gemini 3.5 Flash.

Features: read, write, edit, and unrestricted bash; text, image, PDF, audio, and video input; local JSONL sessions with inline base64 media; non-interactive --prompt, --resume, and --fork; lightweight interactive mode with cancel, undo, and edit.

Warning: nanogem has unrestricted filesystem and shell access. There is no sandbox or confirmation layer.

Install

bun install
chmod +x agent.ts
mkdir -p ~/.local/bin ~/.nanogem
ln -s "$PWD/agent.ts" ~/.local/bin/nanogem

Create ~/.nanogem/auth.json:

{
  "google": {
    "type": "api_key",
    "key": "YOUR_GEMINI_API_KEY"
  }
}

GEMINI_API_KEY takes precedence over auth.json. Optional global instructions are loaded from ~/.nanogem/AGENTS.md. Sessions are stored under ~/.nanogem/sessions/.

Usage

nanogem
nanogem --prompt "inspect this project"
nanogem --resume SESSION_ID --prompt "continue"
nanogem --fork SESSION_ID --prompt "try another approach"
nanogem --resume SESSION_ID
nanogem --fork SESSION_ID

Interactive commands: /resume ID, /fork ID, /undo, /edit, /exit. Press Ctrl+C during a turn to cancel and rewind it.

agent.ts

#!/usr/bin/env bun
import { GoogleGenAI, type Content, type FunctionCall, type FunctionResponsePart, type Part } from "@google/genai";
import { appendFile, cp, mkdir, readFile, writeFile } from "node:fs/promises";
import { spawn } from "node:child_process";
import { dirname, extname, isAbsolute, join, resolve } from "node:path";
import { homedir } from "node:os";
import { createInterface } from "node:readline";
const MODEL = "gemini-3.5-flash";
const HOME = process.env.NANOGEM_HOME ?? join(homedir(), ".nanogem");
const SESSIONS = join(HOME, "sessions");
const MAX_STEPS = 30;
type ToolOutput = { response: Record<string, unknown>; functionParts?: FunctionResponsePart[]; followup?: Content };
type Event =
  | { type: "meta"; id: string; cwd: string; createdAt: string }
  | { type: "fork"; id: string; from: string; createdAt: string }
  | { type: "rewind"; contentCount: number; prompt: string; createdAt: string }
  | { type: "content"; content: Content };
type Options = { prompt?: string; resume?: string; fork?: string };
type Session = { id: string; dir: string; cwd: string };
const schema = (properties: Record<string, unknown>, required: string[]) => ({ type: "object", properties, required });
const declarations = [
  { name: "read", description: "Read text by lines or return an image, audio, video, or PDF as multimodal content.", parametersJsonSchema: schema({
    path: { type: "string" }, offset: { type: "integer", description: "First text line, 1-based." },
    limit: { type: "integer", description: "Maximum text lines, default 2000." },
  }, ["path"]) },
  { name: "write", description: "Create or fully overwrite a UTF-8 text file.", parametersJsonSchema: schema({
    path: { type: "string" }, content: { type: "string" },
  }, ["path", "content"]) },
  { name: "edit", description: "Replace one unique exact string in a UTF-8 text file.", parametersJsonSchema: schema({
    path: { type: "string" }, oldText: { type: "string" }, newText: { type: "string" },
  }, ["path", "oldText", "newText"]) },
  { name: "bash", description: "Run a zsh command with full host access in the session working directory.", parametersJsonSchema: schema({
    command: { type: "string" },
  }, ["command"]) },
];
function parseArgs(args: string[]): Options {
  const options: Options = {};
  for (let i = 0; i < args.length; i += 1) {
    const arg = args[i]!;
    if (arg === "--prompt") options.prompt = requiredArg(args, ++i, arg);
    else if (arg === "--resume") options.resume = requiredArg(args, ++i, arg);
    else if (arg === "--fork") options.fork = requiredArg(args, ++i, arg);
    else throw new Error(`Unknown option: ${arg}`);
  }
  if (options.resume && options.fork) throw new Error("Use only one of --resume or --fork");
  return options;
}
function requiredArg(args: string[], index: number, flag: string): string { const value = args[index]; if (!value) throw new Error(`${flag} requires a value`); return value; }
function validId(id: string): string { if (!/^[a-zA-Z0-9_-]+$/.test(id)) throw new Error(`Invalid session id: ${id}`); return id; }
function newId(): string { return `${new Date().toISOString().replace(/\D/g, "").slice(0, 14)}-${crypto.randomUUID().slice(0, 8)}`; }
async function readEvents(sessionDir: string): Promise<Event[]> {
  const path = join(sessionDir, "session.jsonl");
  const text = await readFile(path, "utf8");
  const events: unknown[] = text.split("\n").filter(Boolean).map((line) => JSON.parse(line));
  for (const event of events) {
    if (!event || typeof event !== "object" || !("type" in event) || !["meta", "fork", "rewind", "content"].includes(String(event.type))) {
      throw new Error("Unsupported session schema; start a new session");
    }
  }
  return events as Event[];
}
function activeContents(events: Event[]): Content[] {
  const contents: Content[] = [];
  for (const event of events) {
    if (event.type === "content") contents.push(event.content);
    else if (event.type === "rewind") {
      if (!Number.isInteger(event.contentCount) || event.contentCount < 0 || event.contentCount > contents.length || typeof event.prompt !== "string") throw new Error("Invalid rewind event");
      contents.length = event.contentCount;
    }
  }
  return contents;
}
async function rewindLastTurn(session: Session): Promise<string> {
  const contents = activeContents(await readEvents(session.dir));
  for (let i = contents.length - 1; i >= 0; i -= 1) {
    const content = contents[i]!; const text = content.parts?.length === 1 ? content.parts[0]?.text : undefined;
    if (content.role === "user" && typeof text === "string") {
      await appendEvent(session.dir, { type: "rewind", contentCount: i, prompt: text, createdAt: new Date().toISOString() });
      return text;
    }
  }
  throw new Error("Session has no user message to undo");
}
async function editLastTurn(session: Session): Promise<string> {
  const events = await readEvents(session.dir); const last = events.findLast((event) => event.type === "rewind" || event.type === "content");
  return last?.type === "rewind" ? last.prompt : rewindLastTurn(session);
}
async function appendEvent(sessionDir: string, event: Event): Promise<void> { await appendFile(join(sessionDir, "session.jsonl"), `${JSON.stringify(event)}\n`); }
async function openSession(options: Options): Promise<Session> {
  await mkdir(SESSIONS, { recursive: true });
  const source = options.fork ?? options.resume;
  let id = source ? validId(source) : newId();
  if (options.fork) {
    const from = join(SESSIONS, id);
    id = newId();
    await cp(from, join(SESSIONS, id), { recursive: true, force: false, errorOnExist: true });
    await appendEvent(join(SESSIONS, id), { type: "fork", id, from: options.fork, createdAt: new Date().toISOString() });
  }
  const dir = join(SESSIONS, id);
  if (!source) {
    await mkdir(dir);
    await appendEvent(dir, { type: "meta", id, cwd: resolve(process.cwd()), createdAt: new Date().toISOString() });
  }
  const events = await readEvents(dir);
  const meta = events.find((event): event is Extract<Event, { type: "meta" }> => event.type === "meta");
  if (!meta) throw new Error(`Session ${id} has no metadata`);
  return { id, dir, cwd: resolve(meta.cwd) };
}
async function apiKey(): Promise<string> {
  if (process.env.GEMINI_API_KEY) return process.env.GEMINI_API_KEY;
  const path = join(HOME, "auth.json");
  let auth: unknown;
  try { auth = JSON.parse(await readFile(path, "utf8")); }
  catch (error) {
    if ((error as NodeJS.ErrnoException).code === "ENOENT") throw new Error(`GEMINI_API_KEY is unset and ${path} does not exist`);
    throw error;
  }
  const google = (auth as { google?: { type?: unknown; key?: unknown } })?.google;
  if (google?.type !== "api_key" || typeof google.key !== "string" || !google.key) throw new Error(`Invalid Google credential in ${path}`);
  return google.key;
}
async function systemPrompt(cwd: string): Promise<string> {
  const base = `You are a coding agent with full host access. Working directory: ${cwd}. Use read, write, edit, and bash when needed. Be concise and never claim an action you did not perform.`;
  const path = join(HOME, "AGENTS.md");
  try { return `${base}\n\nInstructions from ${path}:\n${await readFile(path, "utf8")}`; }
  catch (error) { if ((error as NodeJS.ErrnoException).code === "ENOENT") return base; throw error; }
}
function stringArg(args: Record<string, unknown>, name: string): string {
  const value = args[name];
  if (typeof value !== "string") throw new Error(`${name} must be a string`);
  return value;
}
function filePath(cwd: string, path: string): string { return isAbsolute(path) ? resolve(path) : resolve(cwd, path); }
function visibleLimit(value: string, max = 100_000): string { return value.length <= max ? value : `${value.slice(0, max)}\n[truncated]`; }
const mediaMimes: Record<string, string> = {
  ".png": "image/png", ".jpg": "image/jpeg", ".jpeg": "image/jpeg", ".webp": "image/webp", ".gif": "image/gif", ".heic": "image/heic", ".heif": "image/heif", ".bmp": "image/bmp", ".tif": "image/tiff", ".tiff": "image/tiff",
  ".wav": "audio/wav", ".mp3": "audio/mpeg", ".m4a": "audio/m4a", ".aif": "audio/aiff", ".aiff": "audio/aiff", ".aac": "audio/aac", ".ogg": "audio/ogg", ".flac": "audio/flac", ".opus": "audio/opus",
  ".mp4": "video/mp4", ".mpeg": "video/mpeg", ".mpg": "video/mpeg", ".mov": "video/quicktime", ".webm": "video/webm", ".avi": "video/avi", ".flv": "video/x-flv", ".wmv": "video/wmv", ".3gp": "video/3gpp", ".pdf": "application/pdf",
};
async function shell(command: string, cwd: string, signal?: AbortSignal): Promise<{ exitCode: number; stdout: string; stderr: string }> {
  signal?.throwIfAborted();
  const child = spawn("/bin/zsh", ["-lc", command], { cwd, detached: true, stdio: ["ignore", "pipe", "pipe"] });
  let stdout = ""; let stderr = ""; let timedOut = false; let killError: unknown;
  child.stdout.setEncoding("utf8").on("data", (chunk: string) => { stdout = visibleLimit(stdout + chunk); });
  child.stderr.setEncoding("utf8").on("data", (chunk: string) => { stderr = visibleLimit(stderr + chunk); });
  const kill = () => {
    if (!child.pid) return;
    try { process.kill(-child.pid, "SIGKILL"); }
    catch (error) { if ((error as NodeJS.ErrnoException).code !== "ESRCH") killError = error; }
  };
  const onAbort = () => kill();
  signal?.addEventListener("abort", onAbort, { once: true });
  const timer = setTimeout(() => { timedOut = true; kill(); }, 120_000);
  const exitCode = await new Promise<number>((ok, fail) => {
    child.once("error", fail);
    child.once("close", (code) => ok(code ?? 1));
  }).finally(() => { clearTimeout(timer); signal?.removeEventListener("abort", onAbort); });
  if (killError) throw killError;
  signal?.throwIfAborted();
  if (timedOut) stderr += "\n[command timed out after 120s]";
  return { exitCode, stdout, stderr };
}
async function execute(call: FunctionCall, cwd: string, signal?: AbortSignal): Promise<ToolOutput> {
  if (!call.name) throw new Error("Function call has no name");
  const args = call.args ?? {};
  if (call.name === "read") {
    const path = filePath(cwd, stringArg(args, "path"));
    const mimeType = mediaMimes[extname(path).toLowerCase()];
    if (mimeType) {
      const bytes = await readFile(path);
      const media = { inlineData: { mimeType, data: bytes.toString("base64") } };
      const nested = mimeType.startsWith("image/") || mimeType === "application/pdf";
      return {
        response: { path, mimeType, size: bytes.byteLength, mediaAttached: true },
        functionParts: nested ? [media] : undefined,
        followup: nested ? undefined : { role: "user", parts: [media, { text: `${mimeType} returned by ${call.name}, call_id=${call.id ?? "none"}. Use it as the tool result and continue the pending task. Do not emit raw media tokens.` }] },
      };
    }
    const text = new TextDecoder("utf-8", { fatal: true }).decode(await readFile(path));
    const lines = text.split("\n");
    const offset = typeof args.offset === "number" ? Math.max(1, Math.trunc(args.offset)) : 1;
    const limit = typeof args.limit === "number" ? Math.max(1, Math.trunc(args.limit)) : 2000;
    return { response: { path, offset, totalLines: lines.length, content: visibleLimit(lines.slice(offset - 1, offset - 1 + limit).join("\n")) } };
  }
  if (call.name === "write") {
    const path = filePath(cwd, stringArg(args, "path"));
    const content = stringArg(args, "content");
    await mkdir(dirname(path), { recursive: true });
    await writeFile(path, content);
    return { response: { path, bytes: Buffer.byteLength(content) } };
  }
  if (call.name === "edit") {
    const path = filePath(cwd, stringArg(args, "path"));
    const oldText = stringArg(args, "oldText");
    const newText = stringArg(args, "newText");
    if (!oldText) throw new Error("oldText must not be empty");
    const text = await readFile(path, "utf8");
    const first = text.indexOf(oldText);
    if (first < 0) throw new Error("oldText not found");
    if (text.indexOf(oldText, first + 1) >= 0) throw new Error("oldText is not unique");
    await writeFile(path, `${text.slice(0, first)}${newText}${text.slice(first + oldText.length)}`);
    return { response: { path, replaced: true } };
  }
  if (call.name === "bash") {
    return { response: await shell(stringArg(args, "command"), cwd, signal) };
  }
  throw new Error(`Unknown tool: ${call.name}`);
}
async function runAgent(session: Session, prompt: string, signal?: AbortSignal): Promise<string> {
  await appendEvent(session.dir, { type: "content", content: { role: "user", parts: [{ text: prompt }] } });
  const ai = new GoogleGenAI({ apiKey: await apiKey() });
  const instructions = await systemPrompt(session.cwd);
  for (let step = 0; step < MAX_STEPS; step += 1) {
    signal?.throwIfAborted();
    const contents = activeContents(await readEvents(session.dir));
    const response = await ai.models.generateContent({
      model: MODEL,
      contents,
      config: {
        systemInstruction: instructions,
        abortSignal: signal,
        tools: [{ functionDeclarations: declarations }],
        thinkingConfig: { includeThoughts: true },
      },
    });
    const candidate = response.candidates?.[0];
    const content = candidate?.content;
    if (!content) throw new Error("Gemini returned no content");
    signal?.throwIfAborted();
    await appendEvent(session.dir, { type: "content", content });
    if (candidate.finishReason && candidate.finishReason !== "STOP") throw new Error(`Gemini stopped: ${candidate.finishReason}`);
    const parts = content.parts ?? [];
    const calls = parts.flatMap((part) => part.functionCall ? [part.functionCall] : []);
    if (calls.length === 0) {
      if (response.text === undefined) throw new Error("Gemini returned no text");
      signal?.throwIfAborted();
      return response.text;
    }
    for (const part of parts) {
      if (part.text?.trim()) console.error(`${part.thought ? "[thought] " : ""}${part.text.trimEnd()}`);
    }
    const results: Part[] = []; const followups: Content[] = [];
    for (const call of calls) {
      console.error(`[tool] ${call.name} ${visibleLimit(JSON.stringify(call.args ?? {}), 10_000)}`);
      try {
        const result = await execute(call, session.cwd, signal);
        results.push({ functionResponse: { id: call.id, name: call.name, response: result.response, parts: result.functionParts } });
        if (result.followup) followups.push(result.followup);
      } catch (error) {
        if (signal?.aborted) throw error;
        const message = error instanceof Error ? error.message : String(error);
        console.error(`[tool error] ${message}`);
        if (!call.name) throw error;
        results.push({ functionResponse: { id: call.id, name: call.name, response: { error: message } } });
      }
    }
    await appendEvent(session.dir, { type: "content", content: { role: "user", parts: results } });
    for (const content of followups) await appendEvent(session.dir, { type: "content", content });
  }
  throw new Error(`Agent exceeded ${MAX_STEPS} model steps`);
}
async function interactive(options: Options = {}): Promise<void> {
  if (!process.stdin.isTTY || !process.stdout.isTTY) throw new Error("Interactive mode requires a TTY; use --prompt");
  await apiKey();
  let session = await openSession(options);
  console.error(`[session] ${session.id}`);
  const rl = createInterface({
    input: process.stdin, output: process.stdout, prompt: "> ", historySize: 100, removeHistoryDuplicates: true,
  });
  let running: AbortController | undefined;
  rl.on("SIGINT", () => { if (running) running.abort(); else rl.close(); });
  rl.prompt();
  for await (const raw of rl) {
    const line = raw.trim();
    if (!line) { rl.prompt(); continue; }
    if (line === "/exit") break;
    if (line === "/undo" || line === "/edit") {
      try {
        const previous = line === "/edit" ? await editLastTurn(session) : await rewindLastTurn(session);
        console.error(line === "/undo" ? "[undone]" : "[editing]");
        if (line === "/edit") { rl.prompt(); rl.write(previous); continue; }
      } catch (error) { console.error(error instanceof Error ? error.message : String(error)); }
      rl.prompt(); continue;
    }
    const command = line.match(/^\/(resume|fork)\s+(\S+)$/);
    if (command) {
      try {
        session = await openSession(command[1] === "resume" ? { resume: command[2] } : { fork: command[2] });
        console.error(`[session] ${session.id}`);
      } catch (error) {
        console.error(error instanceof Error ? error.message : String(error));
      }
    } else if (line.startsWith("/")) {
      console.error("Commands: /resume ID, /fork ID, /undo, /edit, /exit");
    } else {
      const controller = new AbortController(); running = controller;
      try { console.log(await runAgent(session, line, controller.signal)); }
      catch (error) { if (controller.signal.aborted) { await rewindLastTurn(session); console.error("[cancelled]"); } else throw error; }
      finally { running = undefined; }
    }
    rl.prompt();
  }
  rl.close();
}
async function main(): Promise<void> {
  const args = process.argv.slice(2);
  if (args.length === 0) return interactive();
  const options = parseArgs(args);
  if (!options.prompt) return interactive(options);
  const session = await openSession(options);
  console.error(`[session] ${session.id}`);
  console.log(await runAgent(session, options.prompt!));
}
try {
  await main();
} catch (error) {
  console.error(error instanceof Error ? error.message : String(error));
  process.exitCode = 1;
}

bun.lock

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  }
}

package.json

{
  "name": "nanogem",
  "private": true,
  "type": "module",
  "scripts": {
    "nanogem": "bun agent.ts",
    "check": "tsc --noEmit"
  },
  "dependencies": {
    "@google/genai": "2.12.0"
  },
  "devDependencies": {
    "@modelcontextprotocol/sdk": "^1.25.2",
    "@types/node": "22.15.3",
    "typescript": "5.9.3"
  }
}

tsconfig.json

{
  "compilerOptions": {
    "target": "ESNext",
    "module": "ESNext",
    "moduleResolution": "Bundler",
    "strict": true,
    "noEmit": true,
    "types": ["node"]
  },
  "include": ["agent.ts"]
}