wckdouglas

#!/bin/env python

from multiprocessing import Pool, Manager
import numpy as np

def tryFunc(i, j,results):
    results.append(i*j)

def main():
    a = 10

wckdouglas

#!/bin/snv Rscript

installPackages <- function(package){
    if(package %in% rownames(installed.packages()) == FALSE)
    {
        message('Installing ',package)
        install.packages(package, dependencies=TRUE)
    }else{
        message(package,' is installed')
    }

wckdouglas

import sys
import os
import fileinput

#==============================set parameter===================
time='1:30:00' 
allocation = '{Allocation-name}' 
projectPrerfix = '{name for the job}'
commandPerJob = 1

wckdouglas

#!/bin/env python

import commands
import glob
import time
import os
import sys

maxJobLim = 46
joblist = glob.glob('./job_*.sge')

wckdouglas

# change prefix
unbind-key C-b
set -g  prefix C-a
bind-key C-a send-prefix
#set -g default-terminal "xterm"
#set-window-option -g xterm-keys on
#set-option -g renumber-windows on

#power line
run-shell "powerline-daemon -q"

wckdouglas

#!/usr/bin/env Rscript

source("http://bioconductor.org/biocLite.R")
packages <- c('data.table','readr',
			  'dplyr','plyr',
			  'ggplot2','cowplot',
			  'caret','RMySQL',
			  'tidyr','stringr',
			  'pheatmap','Rcpp')

wckdouglas

#include <string.h>
#include <cstring>
#include <iostream>
#include <fstream>
#include <gzstream.h>
#include <sstream>

using namespace std;
//get the id hash table and 
//iterate over the fastq file

wckdouglas

#include <iostream>
#include <sstream>
#include <fstream>
#include <string>
#include <vector>
#include <cassert>
#include <iomanip>
#include <cstring>
#include <map>

wckdouglas

#include <Rcpp.h>

using namespace Rcpp;

double getProb(double p, int success, int fail){
	double e = success * log(p) + fail * log(1-p);
	return e;
}

wckdouglas

#include <glob.h>
#include <iostream>
#include <fstream>
#include <gzstream.h>
#include <sstream>
#include <stdlib.h>
#include <string>
#include <vector>
#include <libgen.h>
#include <string.h>