Last active
March 18, 2026 12:05
-
-
Save will-moore/75a7f0de5be0f7b4202d5f0229cadcc9 to your computer and use it in GitHub Desktop.
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| { | |
| "version": 9, | |
| "panels": [ | |
| { | |
| "x": 32.776939633609516, | |
| "y": 299.60384546911166, | |
| "width": 157, | |
| "height": 160.5839416058394, | |
| "zoom": 100, | |
| "dx": 0, | |
| "dy": 0, | |
| "labels": [ | |
| { | |
| "text": "LaminB1", | |
| "size": "18", | |
| "position": "topleft", | |
| "color": "0000FF" | |
| }, | |
| { | |
| "text": "Dapi", | |
| "size": "18", | |
| "position": "topleft", | |
| "color": "FFFF00" | |
| } | |
| ], | |
| "deltaT": [], | |
| "rotation": 0, | |
| "selected": false, | |
| "pixel_size_x_symbol": "µm", | |
| "pixel_size_x_unit": "MICROMETER", | |
| "rotation_symbol": "°", | |
| "max_export_dpi": 1000, | |
| "vertical_flip": false, | |
| "horizontal_flip": false, | |
| "imageId": "https://uk1s3.embassy.ebi.ac.uk/idr/zarr/v0.4/idr0062A/6001240.zarr", | |
| "name": "6001240.zarr", | |
| "sizeZ": 236, | |
| "theZ": 118, | |
| "sizeT": 1, | |
| "theT": 0, | |
| "channels": [ | |
| { | |
| "active": true, | |
| "coefficient": 1, | |
| "color": "0000FF", | |
| "family": "linear", | |
| "inverted": false, | |
| "label": "LaminB1", | |
| "window": { | |
| "end": 1500, | |
| "max": 65535, | |
| "min": 0, | |
| "start": 0 | |
| } | |
| }, | |
| { | |
| "active": true, | |
| "coefficient": 1, | |
| "color": "FFFF00", | |
| "family": "linear", | |
| "inverted": false, | |
| "label": "Dapi", | |
| "window": { | |
| "end": 1500, | |
| "max": 65535, | |
| "min": 0, | |
| "start": 0 | |
| } | |
| } | |
| ], | |
| "orig_width": 271, | |
| "orig_height": 275, | |
| "pixelsType": "uint16", | |
| "zarr": { | |
| "multiscales": [ | |
| { | |
| "axes": [ | |
| { | |
| "name": "c", | |
| "type": "channel" | |
| }, | |
| { | |
| "name": "z", | |
| "type": "space", | |
| "unit": "micrometer" | |
| }, | |
| { | |
| "name": "y", | |
| "type": "space", | |
| "unit": "micrometer" | |
| }, | |
| { | |
| "name": "x", | |
| "type": "space", | |
| "unit": "micrometer" | |
| } | |
| ], | |
| "datasets": [ | |
| { | |
| "coordinateTransformations": [ | |
| { | |
| "scale": [ | |
| 1, | |
| 0.5002025531914894, | |
| 0.3603981534640209, | |
| 0.3603981534640209 | |
| ], | |
| "type": "scale" | |
| } | |
| ], | |
| "path": "0" | |
| }, | |
| { | |
| "coordinateTransformations": [ | |
| { | |
| "scale": [ | |
| 1, | |
| 0.5002025531914894, | |
| 0.7207963069280418, | |
| 0.7207963069280418 | |
| ], | |
| "type": "scale" | |
| } | |
| ], | |
| "path": "1" | |
| }, | |
| { | |
| "coordinateTransformations": [ | |
| { | |
| "scale": [ | |
| 1, | |
| 0.5002025531914894, | |
| 1.4415926138560835, | |
| 1.4415926138560835 | |
| ], | |
| "type": "scale" | |
| } | |
| ], | |
| "path": "2" | |
| } | |
| ], | |
| "version": "0.4" | |
| } | |
| ], | |
| "arrays": { | |
| "0": { | |
| "chunks": [ | |
| 1, | |
| 1, | |
| 275, | |
| 271 | |
| ], | |
| "compressor": { | |
| "blocksize": 0, | |
| "clevel": 5, | |
| "cname": "lz4", | |
| "id": "blosc", | |
| "shuffle": 1 | |
| }, | |
| "dimension_separator": "/", | |
| "dtype": "<u2", | |
| "fill_value": 0, | |
| "filters": null, | |
| "order": "C", | |
| "shape": [ | |
| 2, | |
| 236, | |
| 275, | |
| 271 | |
| ], | |
| "zarr_format": 2 | |
| }, | |
| "1": { | |
| "chunks": [ | |
| 1, | |
| 1, | |
| 137, | |
| 135 | |
| ], | |
| "compressor": { | |
| "blocksize": 0, | |
| "clevel": 5, | |
| "cname": "lz4", | |
| "id": "blosc", | |
| "shuffle": 1 | |
| }, | |
| "dimension_separator": "/", | |
| "dtype": "<u2", | |
| "fill_value": 0, | |
| "filters": null, | |
| "order": "C", | |
| "shape": [ | |
| 2, | |
| 236, | |
| 137, | |
| 135 | |
| ], | |
| "zarr_format": 2 | |
| }, | |
| "2": { | |
| "chunks": [ | |
| 1, | |
| 1, | |
| 68, | |
| 67 | |
| ], | |
| "compressor": { | |
| "blocksize": 0, | |
| "clevel": 5, | |
| "cname": "lz4", | |
| "id": "blosc", | |
| "shuffle": 1 | |
| }, | |
| "dimension_separator": "/", | |
| "dtype": "<u2", | |
| "fill_value": 0, | |
| "filters": null, | |
| "order": "C", | |
| "shape": [ | |
| 2, | |
| 236, | |
| 68, | |
| 67 | |
| ], | |
| "zarr_format": 2 | |
| } | |
| } | |
| } | |
| }, | |
| { | |
| "x": 17.591322267118517, | |
| "y": 74.21611062882681, | |
| "width": 180.45352272222806, | |
| "height": 154.1638724921538, | |
| "zoom": 161, | |
| "dx": -301.7739130434783, | |
| "dy": 113.16521739130434, | |
| "labels": [ | |
| { | |
| "text": "H2B-eGFP", | |
| "size": "21", | |
| "position": "topleft", | |
| "color": "00FF00" | |
| }, | |
| { | |
| "text": "myr-tdTomato", | |
| "size": "21", | |
| "position": "topleft", | |
| "color": "FF0000" | |
| } | |
| ], | |
| "deltaT": [], | |
| "rotation": 0, | |
| "selected": false, | |
| "pixel_size_x_symbol": "µm", | |
| "pixel_size_x_unit": "MICROMETER", | |
| "rotation_symbol": "°", | |
| "max_export_dpi": 1000, | |
| "vertical_flip": false, | |
| "horizontal_flip": false, | |
| "imageId": "https://uk1s3.embassy.ebi.ac.uk/idr/zarr/v0.4/idr0044A/4007801.zarr", | |
| "name": "4007801.zarr", | |
| "sizeZ": 988, | |
| "theZ": 430, | |
| "sizeT": 532, | |
| "theT": 39, | |
| "channels": [ | |
| { | |
| "active": true, | |
| "coefficient": 1, | |
| "color": "00FF00", | |
| "family": "linear", | |
| "inverted": false, | |
| "label": "H2B-eGFP", | |
| "window": { | |
| "end": 1093, | |
| "max": 65535, | |
| "min": 0, | |
| "start": 0 | |
| } | |
| }, | |
| { | |
| "active": true, | |
| "coefficient": 1, | |
| "color": "FF0000", | |
| "family": "linear", | |
| "inverted": false, | |
| "label": "myr-tdTomato", | |
| "window": { | |
| "end": 439, | |
| "max": 65535, | |
| "min": 0, | |
| "start": 0 | |
| } | |
| } | |
| ], | |
| "orig_width": 2169, | |
| "orig_height": 2048, | |
| "pixelsType": "uint16", | |
| "zarr": { | |
| "multiscales": [ | |
| { | |
| "axes": [ | |
| { | |
| "name": "t", | |
| "type": "time" | |
| }, | |
| { | |
| "name": "c", | |
| "type": "channel" | |
| }, | |
| { | |
| "name": "z", | |
| "type": "space", | |
| "unit": "micrometer" | |
| }, | |
| { | |
| "name": "y", | |
| "type": "space", | |
| "unit": "micrometer" | |
| }, | |
| { | |
| "name": "x", | |
| "type": "space", | |
| "unit": "micrometer" | |
| } | |
| ], | |
| "datasets": [ | |
| { | |
| "coordinateTransformations": [ | |
| { | |
| "scale": [ | |
| 1, | |
| 1, | |
| 1, | |
| 1, | |
| 1 | |
| ], | |
| "type": "scale" | |
| } | |
| ], | |
| "path": "0" | |
| }, | |
| { | |
| "coordinateTransformations": [ | |
| { | |
| "scale": [ | |
| 1, | |
| 1, | |
| 1, | |
| 2, | |
| 2 | |
| ], | |
| "type": "scale" | |
| } | |
| ], | |
| "path": "1" | |
| }, | |
| { | |
| "coordinateTransformations": [ | |
| { | |
| "scale": [ | |
| 1, | |
| 1, | |
| 1, | |
| 4, | |
| 4 | |
| ], | |
| "type": "scale" | |
| } | |
| ], | |
| "path": "2" | |
| }, | |
| { | |
| "coordinateTransformations": [ | |
| { | |
| "scale": [ | |
| 1, | |
| 1, | |
| 1, | |
| 8, | |
| 8 | |
| ], | |
| "type": "scale" | |
| } | |
| ], | |
| "path": "3" | |
| }, | |
| { | |
| "coordinateTransformations": [ | |
| { | |
| "scale": [ | |
| 1, | |
| 1, | |
| 1, | |
| 16, | |
| 16 | |
| ], | |
| "type": "scale" | |
| } | |
| ], | |
| "path": "4" | |
| } | |
| ], | |
| "metadata": { | |
| "method": "loci.common.image.SimpleImageScaler", | |
| "version": "Bio-Formats 6.9.1" | |
| }, | |
| "version": "0.4" | |
| } | |
| ], | |
| "arrays": { | |
| "0": { | |
| "chunks": [ | |
| 1, | |
| 1, | |
| 1, | |
| 1024, | |
| 1024 | |
| ], | |
| "compressor": { | |
| "clevel": 5, | |
| "blocksize": 0, | |
| "shuffle": 1, | |
| "cname": "lz4", | |
| "id": "blosc" | |
| }, | |
| "dtype": ">u2", | |
| "fill_value": 0, | |
| "filters": null, | |
| "order": "C", | |
| "shape": [ | |
| 532, | |
| 2, | |
| 988, | |
| 2048, | |
| 2169 | |
| ], | |
| "dimension_separator": "/", | |
| "zarr_format": 2 | |
| }, | |
| "1": { | |
| "chunks": [ | |
| 1, | |
| 1, | |
| 1, | |
| 1024, | |
| 1024 | |
| ], | |
| "compressor": { | |
| "clevel": 5, | |
| "blocksize": 0, | |
| "shuffle": 1, | |
| "cname": "lz4", | |
| "id": "blosc" | |
| }, | |
| "dtype": ">u2", | |
| "fill_value": 0, | |
| "filters": null, | |
| "order": "C", | |
| "shape": [ | |
| 532, | |
| 2, | |
| 988, | |
| 1024, | |
| 1084 | |
| ], | |
| "dimension_separator": "/", | |
| "zarr_format": 2 | |
| }, | |
| "2": { | |
| "chunks": [ | |
| 1, | |
| 1, | |
| 1, | |
| 512, | |
| 542 | |
| ], | |
| "compressor": { | |
| "clevel": 5, | |
| "blocksize": 0, | |
| "shuffle": 1, | |
| "cname": "lz4", | |
| "id": "blosc" | |
| }, | |
| "dtype": ">u2", | |
| "fill_value": 0, | |
| "filters": null, | |
| "order": "C", | |
| "shape": [ | |
| 532, | |
| 2, | |
| 988, | |
| 512, | |
| 542 | |
| ], | |
| "dimension_separator": "/", | |
| "zarr_format": 2 | |
| }, | |
| "3": { | |
| "chunks": [ | |
| 1, | |
| 1, | |
| 1, | |
| 256, | |
| 271 | |
| ], | |
| "compressor": { | |
| "clevel": 5, | |
| "blocksize": 0, | |
| "shuffle": 1, | |
| "cname": "lz4", | |
| "id": "blosc" | |
| }, | |
| "dtype": ">u2", | |
| "fill_value": 0, | |
| "filters": null, | |
| "order": "C", | |
| "shape": [ | |
| 532, | |
| 2, | |
| 988, | |
| 256, | |
| 271 | |
| ], | |
| "dimension_separator": "/", | |
| "zarr_format": 2 | |
| }, | |
| "4": { | |
| "chunks": [ | |
| 1, | |
| 1, | |
| 1, | |
| 128, | |
| 135 | |
| ], | |
| "compressor": { | |
| "clevel": 5, | |
| "blocksize": 0, | |
| "shuffle": 1, | |
| "cname": "lz4", | |
| "id": "blosc" | |
| }, | |
| "dtype": ">u2", | |
| "fill_value": 0, | |
| "filters": null, | |
| "order": "C", | |
| "shape": [ | |
| 532, | |
| 2, | |
| 988, | |
| 128, | |
| 135 | |
| ], | |
| "dimension_separator": "/", | |
| "zarr_format": 2 | |
| } | |
| } | |
| } | |
| }, | |
| { | |
| "x": 31.08678861788615, | |
| "y": 482.6662931054629, | |
| "width": 297.18408647711055, | |
| "height": 175.42303934270956, | |
| "zoom": 100, | |
| "dx": 0, | |
| "dy": 0, | |
| "labels": [], | |
| "deltaT": [], | |
| "rotation": 0, | |
| "selected": true, | |
| "pixel_size_x_symbol": "µm", | |
| "pixel_size_x_unit": "MICROMETER", | |
| "rotation_symbol": "°", | |
| "max_export_dpi": 1000, | |
| "vertical_flip": false, | |
| "horizontal_flip": false, | |
| "imageId": "https://uk1s3.embassy.ebi.ac.uk/idr/zarr/v0.4/idr0048A/9846152.zarr", | |
| "name": "/", | |
| "sizeZ": 91, | |
| "theZ": 45, | |
| "sizeT": 1, | |
| "theT": 0, | |
| "channels": [ | |
| { | |
| "active": true, | |
| "coefficient": 1, | |
| "color": "FF0000", | |
| "family": "linear", | |
| "inverted": false, | |
| "label": "0", | |
| "window": { | |
| "end": 25000, | |
| "max": 65535, | |
| "min": 0, | |
| "start": 0 | |
| } | |
| }, | |
| { | |
| "active": true, | |
| "coefficient": 1, | |
| "color": "00FF00", | |
| "family": "linear", | |
| "inverted": false, | |
| "label": "1", | |
| "window": { | |
| "end": 25000, | |
| "max": 65535, | |
| "min": 0, | |
| "start": 0 | |
| } | |
| }, | |
| { | |
| "active": true, | |
| "coefficient": 1, | |
| "color": "0000FF", | |
| "family": "linear", | |
| "inverted": false, | |
| "label": "2", | |
| "window": { | |
| "end": 25000, | |
| "max": 65535, | |
| "min": 0, | |
| "start": 0 | |
| } | |
| } | |
| ], | |
| "orig_width": 19120, | |
| "orig_height": 13350, | |
| "pixelsType": "uint16", | |
| "zarr": { | |
| "multiscales": [ | |
| { | |
| "axes": [ | |
| { | |
| "name": "c", | |
| "type": "channel" | |
| }, | |
| { | |
| "name": "z", | |
| "type": "space" | |
| }, | |
| { | |
| "name": "y", | |
| "type": "space" | |
| }, | |
| { | |
| "name": "x", | |
| "type": "space" | |
| } | |
| ], | |
| "datasets": [ | |
| { | |
| "coordinateTransformations": [ | |
| { | |
| "scale": [ | |
| 1, | |
| 1, | |
| 1, | |
| 1 | |
| ], | |
| "type": "scale" | |
| } | |
| ], | |
| "path": "0" | |
| }, | |
| { | |
| "coordinateTransformations": [ | |
| { | |
| "scale": [ | |
| 1, | |
| 1, | |
| 2, | |
| 2 | |
| ], | |
| "type": "scale" | |
| } | |
| ], | |
| "path": "1" | |
| }, | |
| { | |
| "coordinateTransformations": [ | |
| { | |
| "scale": [ | |
| 1, | |
| 1, | |
| 4, | |
| 4 | |
| ], | |
| "type": "scale" | |
| } | |
| ], | |
| "path": "2" | |
| }, | |
| { | |
| "coordinateTransformations": [ | |
| { | |
| "scale": [ | |
| 1, | |
| 1, | |
| 8, | |
| 8 | |
| ], | |
| "type": "scale" | |
| } | |
| ], | |
| "path": "3" | |
| }, | |
| { | |
| "coordinateTransformations": [ | |
| { | |
| "scale": [ | |
| 1, | |
| 1, | |
| 16, | |
| 16 | |
| ], | |
| "type": "scale" | |
| } | |
| ], | |
| "path": "4" | |
| }, | |
| { | |
| "coordinateTransformations": [ | |
| { | |
| "scale": [ | |
| 1, | |
| 1, | |
| 32, | |
| 32 | |
| ], | |
| "type": "scale" | |
| } | |
| ], | |
| "path": "5" | |
| }, | |
| { | |
| "coordinateTransformations": [ | |
| { | |
| "scale": [ | |
| 1, | |
| 1, | |
| 64, | |
| 64 | |
| ], | |
| "type": "scale" | |
| } | |
| ], | |
| "path": "6" | |
| }, | |
| { | |
| "coordinateTransformations": [ | |
| { | |
| "scale": [ | |
| 1, | |
| 1, | |
| 128, | |
| 128 | |
| ], | |
| "type": "scale" | |
| } | |
| ], | |
| "path": "7" | |
| }, | |
| { | |
| "coordinateTransformations": [ | |
| { | |
| "scale": [ | |
| 1, | |
| 1, | |
| 256, | |
| 256 | |
| ], | |
| "type": "scale" | |
| } | |
| ], | |
| "path": "8" | |
| } | |
| ], | |
| "name": "/", | |
| "version": "0.4" | |
| } | |
| ], | |
| "arrays": { | |
| "0": { | |
| "chunks": [ | |
| 1, | |
| 1, | |
| 1024, | |
| 1024 | |
| ], | |
| "compressor": { | |
| "blocksize": 0, | |
| "clevel": 5, | |
| "cname": "lz4", | |
| "id": "blosc", | |
| "shuffle": 1 | |
| }, | |
| "dimension_separator": "/", | |
| "dtype": "<u2", | |
| "fill_value": 0, | |
| "filters": null, | |
| "order": "C", | |
| "shape": [ | |
| 3, | |
| 91, | |
| 13350, | |
| 19120 | |
| ], | |
| "zarr_format": 2 | |
| }, | |
| "1": { | |
| "chunks": [ | |
| 1, | |
| 1, | |
| 1024, | |
| 1024 | |
| ], | |
| "compressor": { | |
| "blocksize": 0, | |
| "clevel": 5, | |
| "cname": "lz4", | |
| "id": "blosc", | |
| "shuffle": 1 | |
| }, | |
| "dimension_separator": "/", | |
| "dtype": "<u2", | |
| "fill_value": 0, | |
| "filters": null, | |
| "order": "C", | |
| "shape": [ | |
| 3, | |
| 91, | |
| 6675, | |
| 9560 | |
| ], | |
| "zarr_format": 2 | |
| }, | |
| "2": { | |
| "chunks": [ | |
| 1, | |
| 1, | |
| 1024, | |
| 1024 | |
| ], | |
| "compressor": { | |
| "blocksize": 0, | |
| "clevel": 5, | |
| "cname": "lz4", | |
| "id": "blosc", | |
| "shuffle": 1 | |
| }, | |
| "dimension_separator": "/", | |
| "dtype": "<u2", | |
| "fill_value": 0, | |
| "filters": null, | |
| "order": "C", | |
| "shape": [ | |
| 3, | |
| 91, | |
| 3337, | |
| 4780 | |
| ], | |
| "zarr_format": 2 | |
| }, | |
| "3": { | |
| "chunks": [ | |
| 1, | |
| 1, | |
| 1024, | |
| 1024 | |
| ], | |
| "compressor": { | |
| "blocksize": 0, | |
| "clevel": 5, | |
| "cname": "lz4", | |
| "id": "blosc", | |
| "shuffle": 1 | |
| }, | |
| "dimension_separator": "/", | |
| "dtype": "<u2", | |
| "fill_value": 0, | |
| "filters": null, | |
| "order": "C", | |
| "shape": [ | |
| 3, | |
| 91, | |
| 1668, | |
| 2390 | |
| ], | |
| "zarr_format": 2 | |
| }, | |
| "4": { | |
| "chunks": [ | |
| 1, | |
| 1, | |
| 834, | |
| 1024 | |
| ], | |
| "compressor": { | |
| "blocksize": 0, | |
| "clevel": 5, | |
| "cname": "lz4", | |
| "id": "blosc", | |
| "shuffle": 1 | |
| }, | |
| "dimension_separator": "/", | |
| "dtype": "<u2", | |
| "fill_value": 0, | |
| "filters": null, | |
| "order": "C", | |
| "shape": [ | |
| 3, | |
| 91, | |
| 834, | |
| 1195 | |
| ], | |
| "zarr_format": 2 | |
| }, | |
| "5": { | |
| "chunks": [ | |
| 1, | |
| 1, | |
| 417, | |
| 597 | |
| ], | |
| "compressor": { | |
| "blocksize": 0, | |
| "clevel": 5, | |
| "cname": "lz4", | |
| "id": "blosc", | |
| "shuffle": 1 | |
| }, | |
| "dimension_separator": "/", | |
| "dtype": "<u2", | |
| "fill_value": 0, | |
| "filters": null, | |
| "order": "C", | |
| "shape": [ | |
| 3, | |
| 91, | |
| 417, | |
| 597 | |
| ], | |
| "zarr_format": 2 | |
| }, | |
| "6": { | |
| "chunks": [ | |
| 1, | |
| 1, | |
| 208, | |
| 298 | |
| ], | |
| "compressor": { | |
| "blocksize": 0, | |
| "clevel": 5, | |
| "cname": "lz4", | |
| "id": "blosc", | |
| "shuffle": 1 | |
| }, | |
| "dimension_separator": "/", | |
| "dtype": "<u2", | |
| "fill_value": 0, | |
| "filters": null, | |
| "order": "C", | |
| "shape": [ | |
| 3, | |
| 91, | |
| 208, | |
| 298 | |
| ], | |
| "zarr_format": 2 | |
| }, | |
| "7": { | |
| "chunks": [ | |
| 1, | |
| 1, | |
| 104, | |
| 149 | |
| ], | |
| "compressor": { | |
| "blocksize": 0, | |
| "clevel": 5, | |
| "cname": "lz4", | |
| "id": "blosc", | |
| "shuffle": 1 | |
| }, | |
| "dimension_separator": "/", | |
| "dtype": "<u2", | |
| "fill_value": 0, | |
| "filters": null, | |
| "order": "C", | |
| "shape": [ | |
| 3, | |
| 91, | |
| 104, | |
| 149 | |
| ], | |
| "zarr_format": 2 | |
| }, | |
| "8": { | |
| "chunks": [ | |
| 1, | |
| 1, | |
| 52, | |
| 74 | |
| ], | |
| "compressor": { | |
| "blocksize": 0, | |
| "clevel": 5, | |
| "cname": "lz4", | |
| "id": "blosc", | |
| "shuffle": 1 | |
| }, | |
| "dimension_separator": "/", | |
| "dtype": "<u2", | |
| "fill_value": 0, | |
| "filters": null, | |
| "order": "C", | |
| "shape": [ | |
| 3, | |
| 91, | |
| 52, | |
| 74 | |
| ], | |
| "zarr_format": 2 | |
| } | |
| } | |
| }, | |
| "shapes": [ | |
| { | |
| "type": "Rectangle", | |
| "x": 11349.8910668446, | |
| "y": 3665.792338572498, | |
| "width": 3760.8375846206577, | |
| "height": 3762.0772946859906, | |
| "area": 14148561.68610308, | |
| "strokeWidth": 2, | |
| "strokeColor": "#FFFFFF", | |
| "rotation": 360, | |
| "fillColor": "#FFFFFF", | |
| "fillOpacity": "0.0", | |
| "textId": 30595028, | |
| "id": 41526087 | |
| }, | |
| { | |
| "type": "Rectangle", | |
| "x": 7504.182611822813, | |
| "y": 7552.344351520639, | |
| "width": 471.40942424169754, | |
| "height": 471.56481808548216, | |
| "area": 222300.09938631798, | |
| "strokeWidth": 2, | |
| "strokeColor": "#FFFFFF", | |
| "rotation": 360, | |
| "fillColor": "#FFFFFF", | |
| "fillOpacity": "0.0", | |
| "textId": 76904124, | |
| "id": 41363599 | |
| }, | |
| { | |
| "type": "Text", | |
| "x": 10201.827667791193, | |
| "y": 10046.161121160334, | |
| "area": 9943.501247689826, | |
| "fontSize": 24, | |
| "strokeColor": "#FF00FF", | |
| "fillColor": "#0000FF", | |
| "fillOpacity": "1.0", | |
| "text": "Brain slice", | |
| "textAnchor": "middle", | |
| "rotation": 0, | |
| "id": -3150972837592281 | |
| }, | |
| { | |
| "type": "Text", | |
| "x": 4797.381818181815, | |
| "y": 2206.9477272727213, | |
| "area": 8413.732233037648, | |
| "fontSize": 18, | |
| "strokeColor": "#FFFF00", | |
| "fillColor": "#0000FF", | |
| "fillOpacity": 0, | |
| "text": "*Hippo*campus", | |
| "textAnchor": "middle", | |
| "rotation": 0, | |
| "id": -3649127739165732 | |
| }, | |
| { | |
| "type": "Text", | |
| "x": 8373.273520913717, | |
| "y": 8421.43526061155, | |
| "area": 368.30176698000287, | |
| "fontSize": 12, | |
| "strokeColor": "#FFFFFF", | |
| "fillColor": "#000000", | |
| "fillOpacity": "0.0", | |
| "text": "A", | |
| "textAnchor": "middle", | |
| "rotation": 0, | |
| "id": 76904124 | |
| }, | |
| { | |
| "type": "Text", | |
| "x": 12218.981975935509, | |
| "y": 4534.883247663408, | |
| "area": 366.80902738503755, | |
| "fontSize": 12, | |
| "strokeColor": "#FFFFFF", | |
| "fillColor": "#000000", | |
| "fillOpacity": "0.0", | |
| "text": "B", | |
| "textAnchor": "middle", | |
| "rotation": 0, | |
| "id": 30595028 | |
| }, | |
| { | |
| "type": "Arrow", | |
| "x1": 3545.890909090909, | |
| "x2": 6744.145454545454, | |
| "y1": 3180.3295454545455, | |
| "y2": 6065.711363636364, | |
| "area": 8614.931311209597, | |
| "strokeWidth": 2, | |
| "strokeColor": "#FFFF00", | |
| "id": -3459485257764895 | |
| } | |
| ], | |
| "lastInsetTextIndex": 66 | |
| }, | |
| { | |
| "x": 283.1022701444024, | |
| "y": 77.59274883519919, | |
| "width": 246.41414141414134, | |
| "height": 340.4438846136183, | |
| "zoom": 100, | |
| "dx": 0, | |
| "dy": 0, | |
| "labels": [ | |
| { | |
| "text": "[image.name]", | |
| "size": "21", | |
| "position": "top", | |
| "color": "927b07" | |
| }, | |
| { | |
| "text": "**Chick *Embryo*** image", | |
| "size": 21, | |
| "position": "topleft", | |
| "color": "f0ce24" | |
| } | |
| ], | |
| "deltaT": [], | |
| "rotation": 0, | |
| "selected": false, | |
| "pixel_size_x_symbol": "µm", | |
| "pixel_size_x_unit": "MICROMETER", | |
| "rotation_symbol": "°", | |
| "max_export_dpi": 1000, | |
| "vertical_flip": false, | |
| "horizontal_flip": false, | |
| "imageId": "https://uk1s3.embassy.ebi.ac.uk/idr/zarr/v0.5/idr0066/ExpD_chicken_embryo_MIP.ome.zarr", | |
| "name": "/", | |
| "sizeZ": 1, | |
| "theZ": 0, | |
| "sizeT": 1, | |
| "theT": 0, | |
| "channels": [ | |
| { | |
| "label": "Cy3", | |
| "active": true, | |
| "color": "FFFFFF", | |
| "window": { | |
| "min": 0, | |
| "max": 255, | |
| "start": 0, | |
| "end": 55 | |
| } | |
| } | |
| ], | |
| "orig_width": 6510, | |
| "orig_height": 8978, | |
| "pixelsType": "uint64", | |
| "zarr": { | |
| "multiscales": [ | |
| { | |
| "axes": [ | |
| { | |
| "name": "y", | |
| "type": "space", | |
| "unit": "micrometer" | |
| }, | |
| { | |
| "name": "x", | |
| "type": "space", | |
| "unit": "micrometer" | |
| } | |
| ], | |
| "datasets": [ | |
| { | |
| "coordinateTransformations": [ | |
| { | |
| "scale": [ | |
| 1.6, | |
| 1.6 | |
| ], | |
| "type": "scale" | |
| } | |
| ], | |
| "path": "0" | |
| }, | |
| { | |
| "coordinateTransformations": [ | |
| { | |
| "scale": [ | |
| 3.2, | |
| 3.2 | |
| ], | |
| "type": "scale" | |
| } | |
| ], | |
| "path": "1" | |
| }, | |
| { | |
| "coordinateTransformations": [ | |
| { | |
| "scale": [ | |
| 6.4, | |
| 6.4 | |
| ], | |
| "type": "scale" | |
| } | |
| ], | |
| "path": "2" | |
| }, | |
| { | |
| "coordinateTransformations": [ | |
| { | |
| "scale": [ | |
| 12.8, | |
| 12.8 | |
| ], | |
| "type": "scale" | |
| } | |
| ], | |
| "path": "3" | |
| }, | |
| { | |
| "coordinateTransformations": [ | |
| { | |
| "scale": [ | |
| 25.6, | |
| 25.6 | |
| ], | |
| "type": "scale" | |
| } | |
| ], | |
| "path": "4" | |
| }, | |
| { | |
| "coordinateTransformations": [ | |
| { | |
| "scale": [ | |
| 51.2, | |
| 51.2 | |
| ], | |
| "type": "scale" | |
| } | |
| ], | |
| "path": "5" | |
| }, | |
| { | |
| "coordinateTransformations": [ | |
| { | |
| "scale": [ | |
| 102.4, | |
| 102.4 | |
| ], | |
| "type": "scale" | |
| } | |
| ], | |
| "path": "6" | |
| }, | |
| { | |
| "coordinateTransformations": [ | |
| { | |
| "scale": [ | |
| 204.8, | |
| 204.8 | |
| ], | |
| "type": "scale" | |
| } | |
| ], | |
| "path": "7" | |
| } | |
| ], | |
| "name": "/" | |
| } | |
| ], | |
| "arrays": { | |
| "0": { | |
| "shape": [ | |
| 8978, | |
| 6510 | |
| ], | |
| "dtype": "uint8" | |
| }, | |
| "1": { | |
| "shape": [ | |
| 4489, | |
| 3255 | |
| ], | |
| "dtype": "uint8" | |
| }, | |
| "2": { | |
| "shape": [ | |
| 2244, | |
| 1627 | |
| ], | |
| "dtype": "uint8" | |
| }, | |
| "3": { | |
| "shape": [ | |
| 1122, | |
| 813 | |
| ], | |
| "dtype": "uint8" | |
| }, | |
| "4": { | |
| "shape": [ | |
| 561, | |
| 406 | |
| ], | |
| "dtype": "uint8" | |
| }, | |
| "5": { | |
| "shape": [ | |
| 280, | |
| 203 | |
| ], | |
| "dtype": "uint8" | |
| }, | |
| "6": { | |
| "shape": [ | |
| 140, | |
| 101 | |
| ], | |
| "dtype": "uint8" | |
| }, | |
| "7": { | |
| "shape": [ | |
| 70, | |
| 50 | |
| ], | |
| "dtype": "uint8" | |
| } | |
| }, | |
| "zarr_version": 3, | |
| "version": "0.5" | |
| }, | |
| "pixel_size_x": 1.6, | |
| "pixel_size_y": 1.6, | |
| "pixel_size_y_unit": "MICROMETER", | |
| "pixel_size_y_symbol": "µm" | |
| }, | |
| { | |
| "x": 31.08797344543408, | |
| "y": 668.2460999823337, | |
| "width": 145.30262123694237, | |
| "height": 145.35051831253077, | |
| "zoom": 2831, | |
| "dx": 1820.1126760563384, | |
| "dy": -1113.1267605633802, | |
| "labels": [ | |
| { | |
| "text": "A", | |
| "size": 18, | |
| "position": "topleft", | |
| "color": "FFFFFF", | |
| "inset": true | |
| } | |
| ], | |
| "deltaT": [], | |
| "rotation": 0, | |
| "selected": false, | |
| "pixel_size_x_symbol": "µm", | |
| "pixel_size_x_unit": "MICROMETER", | |
| "rotation_symbol": "°", | |
| "max_export_dpi": 1000, | |
| "vertical_flip": false, | |
| "horizontal_flip": false, | |
| "imageId": "https://uk1s3.embassy.ebi.ac.uk/idr/zarr/v0.4/idr0048A/9846152.zarr", | |
| "name": "/", | |
| "sizeZ": 91, | |
| "theZ": 45, | |
| "sizeT": 1, | |
| "theT": 0, | |
| "channels": [ | |
| { | |
| "active": true, | |
| "coefficient": 1, | |
| "color": "FF0000", | |
| "family": "linear", | |
| "inverted": false, | |
| "label": "0", | |
| "window": { | |
| "end": 25000, | |
| "max": 65535, | |
| "min": 0, | |
| "start": 0 | |
| } | |
| }, | |
| { | |
| "active": true, | |
| "coefficient": 1, | |
| "color": "00FF00", | |
| "family": "linear", | |
| "inverted": false, | |
| "label": "1", | |
| "window": { | |
| "end": 25000, | |
| "max": 65535, | |
| "min": 0, | |
| "start": 0 | |
| } | |
| }, | |
| { | |
| "active": true, | |
| "coefficient": 1, | |
| "color": "0000FF", | |
| "family": "linear", | |
| "inverted": false, | |
| "label": "2", | |
| "window": { | |
| "end": 25000, | |
| "max": 65535, | |
| "min": 0, | |
| "start": 0 | |
| } | |
| } | |
| ], | |
| "orig_width": 19120, | |
| "orig_height": 13350, | |
| "pixelsType": "uint16", | |
| "zarr": { | |
| "multiscales": [ | |
| { | |
| "axes": [ | |
| { | |
| "name": "c", | |
| "type": "channel" | |
| }, | |
| { | |
| "name": "z", | |
| "type": "space" | |
| }, | |
| { | |
| "name": "y", | |
| "type": "space" | |
| }, | |
| { | |
| "name": "x", | |
| "type": "space" | |
| } | |
| ], | |
| "datasets": [ | |
| { | |
| "coordinateTransformations": [ | |
| { | |
| "scale": [ | |
| 1, | |
| 1, | |
| 1, | |
| 1 | |
| ], | |
| "type": "scale" | |
| } | |
| ], | |
| "path": "0" | |
| }, | |
| { | |
| "coordinateTransformations": [ | |
| { | |
| "scale": [ | |
| 1, | |
| 1, | |
| 2, | |
| 2 | |
| ], | |
| "type": "scale" | |
| } | |
| ], | |
| "path": "1" | |
| }, | |
| { | |
| "coordinateTransformations": [ | |
| { | |
| "scale": [ | |
| 1, | |
| 1, | |
| 4, | |
| 4 | |
| ], | |
| "type": "scale" | |
| } | |
| ], | |
| "path": "2" | |
| }, | |
| { | |
| "coordinateTransformations": [ | |
| { | |
| "scale": [ | |
| 1, | |
| 1, | |
| 8, | |
| 8 | |
| ], | |
| "type": "scale" | |
| } | |
| ], | |
| "path": "3" | |
| }, | |
| { | |
| "coordinateTransformations": [ | |
| { | |
| "scale": [ | |
| 1, | |
| 1, | |
| 16, | |
| 16 | |
| ], | |
| "type": "scale" | |
| } | |
| ], | |
| "path": "4" | |
| }, | |
| { | |
| "coordinateTransformations": [ | |
| { | |
| "scale": [ | |
| 1, | |
| 1, | |
| 32, | |
| 32 | |
| ], | |
| "type": "scale" | |
| } | |
| ], | |
| "path": "5" | |
| }, | |
| { | |
| "coordinateTransformations": [ | |
| { | |
| "scale": [ | |
| 1, | |
| 1, | |
| 64, | |
| 64 | |
| ], | |
| "type": "scale" | |
| } | |
| ], | |
| "path": "6" | |
| }, | |
| { | |
| "coordinateTransformations": [ | |
| { | |
| "scale": [ | |
| 1, | |
| 1, | |
| 128, | |
| 128 | |
| ], | |
| "type": "scale" | |
| } | |
| ], | |
| "path": "7" | |
| }, | |
| { | |
| "coordinateTransformations": [ | |
| { | |
| "scale": [ | |
| 1, | |
| 1, | |
| 256, | |
| 256 | |
| ], | |
| "type": "scale" | |
| } | |
| ], | |
| "path": "8" | |
| } | |
| ], | |
| "name": "/", | |
| "version": "0.4" | |
| } | |
| ], | |
| "arrays": { | |
| "0": { | |
| "chunks": [ | |
| 1, | |
| 1, | |
| 1024, | |
| 1024 | |
| ], | |
| "compressor": { | |
| "blocksize": 0, | |
| "clevel": 5, | |
| "cname": "lz4", | |
| "id": "blosc", | |
| "shuffle": 1 | |
| }, | |
| "dimension_separator": "/", | |
| "dtype": "<u2", | |
| "fill_value": 0, | |
| "filters": null, | |
| "order": "C", | |
| "shape": [ | |
| 3, | |
| 91, | |
| 13350, | |
| 19120 | |
| ], | |
| "zarr_format": 2 | |
| }, | |
| "1": { | |
| "chunks": [ | |
| 1, | |
| 1, | |
| 1024, | |
| 1024 | |
| ], | |
| "compressor": { | |
| "blocksize": 0, | |
| "clevel": 5, | |
| "cname": "lz4", | |
| "id": "blosc", | |
| "shuffle": 1 | |
| }, | |
| "dimension_separator": "/", | |
| "dtype": "<u2", | |
| "fill_value": 0, | |
| "filters": null, | |
| "order": "C", | |
| "shape": [ | |
| 3, | |
| 91, | |
| 6675, | |
| 9560 | |
| ], | |
| "zarr_format": 2 | |
| }, | |
| "2": { | |
| "chunks": [ | |
| 1, | |
| 1, | |
| 1024, | |
| 1024 | |
| ], | |
| "compressor": { | |
| "blocksize": 0, | |
| "clevel": 5, | |
| "cname": "lz4", | |
| "id": "blosc", | |
| "shuffle": 1 | |
| }, | |
| "dimension_separator": "/", | |
| "dtype": "<u2", | |
| "fill_value": 0, | |
| "filters": null, | |
| "order": "C", | |
| "shape": [ | |
| 3, | |
| 91, | |
| 3337, | |
| 4780 | |
| ], | |
| "zarr_format": 2 | |
| }, | |
| "3": { | |
| "chunks": [ | |
| 1, | |
| 1, | |
| 1024, | |
| 1024 | |
| ], | |
| "compressor": { | |
| "blocksize": 0, | |
| "clevel": 5, | |
| "cname": "lz4", | |
| "id": "blosc", | |
| "shuffle": 1 | |
| }, | |
| "dimension_separator": "/", | |
| "dtype": "<u2", | |
| "fill_value": 0, | |
| "filters": null, | |
| "order": "C", | |
| "shape": [ | |
| 3, | |
| 91, | |
| 1668, | |
| 2390 | |
| ], | |
| "zarr_format": 2 | |
| }, | |
| "4": { | |
| "chunks": [ | |
| 1, | |
| 1, | |
| 834, | |
| 1024 | |
| ], | |
| "compressor": { | |
| "blocksize": 0, | |
| "clevel": 5, | |
| "cname": "lz4", | |
| "id": "blosc", | |
| "shuffle": 1 | |
| }, | |
| "dimension_separator": "/", | |
| "dtype": "<u2", | |
| "fill_value": 0, | |
| "filters": null, | |
| "order": "C", | |
| "shape": [ | |
| 3, | |
| 91, | |
| 834, | |
| 1195 | |
| ], | |
| "zarr_format": 2 | |
| }, | |
| "5": { | |
| "chunks": [ | |
| 1, | |
| 1, | |
| 417, | |
| 597 | |
| ], | |
| "compressor": { | |
| "blocksize": 0, | |
| "clevel": 5, | |
| "cname": "lz4", | |
| "id": "blosc", | |
| "shuffle": 1 | |
| }, | |
| "dimension_separator": "/", | |
| "dtype": "<u2", | |
| "fill_value": 0, | |
| "filters": null, | |
| "order": "C", | |
| "shape": [ | |
| 3, | |
| 91, | |
| 417, | |
| 597 | |
| ], | |
| "zarr_format": 2 | |
| }, | |
| "6": { | |
| "chunks": [ | |
| 1, | |
| 1, | |
| 208, | |
| 298 | |
| ], | |
| "compressor": { | |
| "blocksize": 0, | |
| "clevel": 5, | |
| "cname": "lz4", | |
| "id": "blosc", | |
| "shuffle": 1 | |
| }, | |
| "dimension_separator": "/", | |
| "dtype": "<u2", | |
| "fill_value": 0, | |
| "filters": null, | |
| "order": "C", | |
| "shape": [ | |
| 3, | |
| 91, | |
| 208, | |
| 298 | |
| ], | |
| "zarr_format": 2 | |
| }, | |
| "7": { | |
| "chunks": [ | |
| 1, | |
| 1, | |
| 104, | |
| 149 | |
| ], | |
| "compressor": { | |
| "blocksize": 0, | |
| "clevel": 5, | |
| "cname": "lz4", | |
| "id": "blosc", | |
| "shuffle": 1 | |
| }, | |
| "dimension_separator": "/", | |
| "dtype": "<u2", | |
| "fill_value": 0, | |
| "filters": null, | |
| "order": "C", | |
| "shape": [ | |
| 3, | |
| 91, | |
| 104, | |
| 149 | |
| ], | |
| "zarr_format": 2 | |
| }, | |
| "8": { | |
| "chunks": [ | |
| 1, | |
| 1, | |
| 52, | |
| 74 | |
| ], | |
| "compressor": { | |
| "blocksize": 0, | |
| "clevel": 5, | |
| "cname": "lz4", | |
| "id": "blosc", | |
| "shuffle": 1 | |
| }, | |
| "dimension_separator": "/", | |
| "dtype": "<u2", | |
| "fill_value": 0, | |
| "filters": null, | |
| "order": "C", | |
| "shape": [ | |
| 3, | |
| 91, | |
| 52, | |
| 74 | |
| ], | |
| "zarr_format": 2 | |
| } | |
| } | |
| }, | |
| "shapes": [], | |
| "lastInsetTextIndex": 64, | |
| "insetRoiId": 41363599 | |
| }, | |
| { | |
| "x": 183.65572574422353, | |
| "y": 668.2460999823337, | |
| "width": 145.30262123694226, | |
| "height": 145.35051831253077, | |
| "zoom": 354.85714285714283, | |
| "dx": -3670.3098591549297, | |
| "dy": 1128.1690140845067, | |
| "labels": [ | |
| { | |
| "text": "B", | |
| "size": 18, | |
| "position": "topleft", | |
| "color": "FFFFFF", | |
| "inset": true | |
| } | |
| ], | |
| "deltaT": [], | |
| "rotation": 0, | |
| "selected": false, | |
| "pixel_size_x_symbol": "µm", | |
| "pixel_size_x_unit": "MICROMETER", | |
| "rotation_symbol": "°", | |
| "max_export_dpi": 1000, | |
| "vertical_flip": false, | |
| "horizontal_flip": false, | |
| "imageId": "https://uk1s3.embassy.ebi.ac.uk/idr/zarr/v0.4/idr0048A/9846152.zarr", | |
| "name": "/", | |
| "sizeZ": 91, | |
| "theZ": 45, | |
| "sizeT": 1, | |
| "theT": 0, | |
| "channels": [ | |
| { | |
| "active": true, | |
| "coefficient": 1, | |
| "color": "FF0000", | |
| "family": "linear", | |
| "inverted": false, | |
| "label": "0", | |
| "window": { | |
| "end": 25000, | |
| "max": 65535, | |
| "min": 0, | |
| "start": 0 | |
| } | |
| }, | |
| { | |
| "active": true, | |
| "coefficient": 1, | |
| "color": "00FF00", | |
| "family": "linear", | |
| "inverted": false, | |
| "label": "1", | |
| "window": { | |
| "end": 25000, | |
| "max": 65535, | |
| "min": 0, | |
| "start": 0 | |
| } | |
| }, | |
| { | |
| "active": true, | |
| "coefficient": 1, | |
| "color": "0000FF", | |
| "family": "linear", | |
| "inverted": false, | |
| "label": "2", | |
| "window": { | |
| "end": 25000, | |
| "max": 65535, | |
| "min": 0, | |
| "start": 0 | |
| } | |
| } | |
| ], | |
| "orig_width": 19120, | |
| "orig_height": 13350, | |
| "pixelsType": "uint16", | |
| "zarr": { | |
| "multiscales": [ | |
| { | |
| "axes": [ | |
| { | |
| "name": "c", | |
| "type": "channel" | |
| }, | |
| { | |
| "name": "z", | |
| "type": "space" | |
| }, | |
| { | |
| "name": "y", | |
| "type": "space" | |
| }, | |
| { | |
| "name": "x", | |
| "type": "space" | |
| } | |
| ], | |
| "datasets": [ | |
| { | |
| "coordinateTransformations": [ | |
| { | |
| "scale": [ | |
| 1, | |
| 1, | |
| 1, | |
| 1 | |
| ], | |
| "type": "scale" | |
| } | |
| ], | |
| "path": "0" | |
| }, | |
| { | |
| "coordinateTransformations": [ | |
| { | |
| "scale": [ | |
| 1, | |
| 1, | |
| 2, | |
| 2 | |
| ], | |
| "type": "scale" | |
| } | |
| ], | |
| "path": "1" | |
| }, | |
| { | |
| "coordinateTransformations": [ | |
| { | |
| "scale": [ | |
| 1, | |
| 1, | |
| 4, | |
| 4 | |
| ], | |
| "type": "scale" | |
| } | |
| ], | |
| "path": "2" | |
| }, | |
| { | |
| "coordinateTransformations": [ | |
| { | |
| "scale": [ | |
| 1, | |
| 1, | |
| 8, | |
| 8 | |
| ], | |
| "type": "scale" | |
| } | |
| ], | |
| "path": "3" | |
| }, | |
| { | |
| "coordinateTransformations": [ | |
| { | |
| "scale": [ | |
| 1, | |
| 1, | |
| 16, | |
| 16 | |
| ], | |
| "type": "scale" | |
| } | |
| ], | |
| "path": "4" | |
| }, | |
| { | |
| "coordinateTransformations": [ | |
| { | |
| "scale": [ | |
| 1, | |
| 1, | |
| 32, | |
| 32 | |
| ], | |
| "type": "scale" | |
| } | |
| ], | |
| "path": "5" | |
| }, | |
| { | |
| "coordinateTransformations": [ | |
| { | |
| "scale": [ | |
| 1, | |
| 1, | |
| 64, | |
| 64 | |
| ], | |
| "type": "scale" | |
| } | |
| ], | |
| "path": "6" | |
| }, | |
| { | |
| "coordinateTransformations": [ | |
| { | |
| "scale": [ | |
| 1, | |
| 1, | |
| 128, | |
| 128 | |
| ], | |
| "type": "scale" | |
| } | |
| ], | |
| "path": "7" | |
| }, | |
| { | |
| "coordinateTransformations": [ | |
| { | |
| "scale": [ | |
| 1, | |
| 1, | |
| 256, | |
| 256 | |
| ], | |
| "type": "scale" | |
| } | |
| ], | |
| "path": "8" | |
| } | |
| ], | |
| "name": "/", | |
| "version": "0.4" | |
| } | |
| ], | |
| "arrays": { | |
| "0": { | |
| "chunks": [ | |
| 1, | |
| 1, | |
| 1024, | |
| 1024 | |
| ], | |
| "compressor": { | |
| "blocksize": 0, | |
| "clevel": 5, | |
| "cname": "lz4", | |
| "id": "blosc", | |
| "shuffle": 1 | |
| }, | |
| "dimension_separator": "/", | |
| "dtype": "<u2", | |
| "fill_value": 0, | |
| "filters": null, | |
| "order": "C", | |
| "shape": [ | |
| 3, | |
| 91, | |
| 13350, | |
| 19120 | |
| ], | |
| "zarr_format": 2 | |
| }, | |
| "1": { | |
| "chunks": [ | |
| 1, | |
| 1, | |
| 1024, | |
| 1024 | |
| ], | |
| "compressor": { | |
| "blocksize": 0, | |
| "clevel": 5, | |
| "cname": "lz4", | |
| "id": "blosc", | |
| "shuffle": 1 | |
| }, | |
| "dimension_separator": "/", | |
| "dtype": "<u2", | |
| "fill_value": 0, | |
| "filters": null, | |
| "order": "C", | |
| "shape": [ | |
| 3, | |
| 91, | |
| 6675, | |
| 9560 | |
| ], | |
| "zarr_format": 2 | |
| }, | |
| "2": { | |
| "chunks": [ | |
| 1, | |
| 1, | |
| 1024, | |
| 1024 | |
| ], | |
| "compressor": { | |
| "blocksize": 0, | |
| "clevel": 5, | |
| "cname": "lz4", | |
| "id": "blosc", | |
| "shuffle": 1 | |
| }, | |
| "dimension_separator": "/", | |
| "dtype": "<u2", | |
| "fill_value": 0, | |
| "filters": null, | |
| "order": "C", | |
| "shape": [ | |
| 3, | |
| 91, | |
| 3337, | |
| 4780 | |
| ], | |
| "zarr_format": 2 | |
| }, | |
| "3": { | |
| "chunks": [ | |
| 1, | |
| 1, | |
| 1024, | |
| 1024 | |
| ], | |
| "compressor": { | |
| "blocksize": 0, | |
| "clevel": 5, | |
| "cname": "lz4", | |
| "id": "blosc", | |
| "shuffle": 1 | |
| }, | |
| "dimension_separator": "/", | |
| "dtype": "<u2", | |
| "fill_value": 0, | |
| "filters": null, | |
| "order": "C", | |
| "shape": [ | |
| 3, | |
| 91, | |
| 1668, | |
| 2390 | |
| ], | |
| "zarr_format": 2 | |
| }, | |
| "4": { | |
| "chunks": [ | |
| 1, | |
| 1, | |
| 834, | |
| 1024 | |
| ], | |
| "compressor": { | |
| "blocksize": 0, | |
| "clevel": 5, | |
| "cname": "lz4", | |
| "id": "blosc", | |
| "shuffle": 1 | |
| }, | |
| "dimension_separator": "/", | |
| "dtype": "<u2", | |
| "fill_value": 0, | |
| "filters": null, | |
| "order": "C", | |
| "shape": [ | |
| 3, | |
| 91, | |
| 834, | |
| 1195 | |
| ], | |
| "zarr_format": 2 | |
| }, | |
| "5": { | |
| "chunks": [ | |
| 1, | |
| 1, | |
| 417, | |
| 597 | |
| ], | |
| "compressor": { | |
| "blocksize": 0, | |
| "clevel": 5, | |
| "cname": "lz4", | |
| "id": "blosc", | |
| "shuffle": 1 | |
| }, | |
| "dimension_separator": "/", | |
| "dtype": "<u2", | |
| "fill_value": 0, | |
| "filters": null, | |
| "order": "C", | |
| "shape": [ | |
| 3, | |
| 91, | |
| 417, | |
| 597 | |
| ], | |
| "zarr_format": 2 | |
| }, | |
| "6": { | |
| "chunks": [ | |
| 1, | |
| 1, | |
| 208, | |
| 298 | |
| ], | |
| "compressor": { | |
| "blocksize": 0, | |
| "clevel": 5, | |
| "cname": "lz4", | |
| "id": "blosc", | |
| "shuffle": 1 | |
| }, | |
| "dimension_separator": "/", | |
| "dtype": "<u2", | |
| "fill_value": 0, | |
| "filters": null, | |
| "order": "C", | |
| "shape": [ | |
| 3, | |
| 91, | |
| 208, | |
| 298 | |
| ], | |
| "zarr_format": 2 | |
| }, | |
| "7": { | |
| "chunks": [ | |
| 1, | |
| 1, | |
| 104, | |
| 149 | |
| ], | |
| "compressor": { | |
| "blocksize": 0, | |
| "clevel": 5, | |
| "cname": "lz4", | |
| "id": "blosc", | |
| "shuffle": 1 | |
| }, | |
| "dimension_separator": "/", | |
| "dtype": "<u2", | |
| "fill_value": 0, | |
| "filters": null, | |
| "order": "C", | |
| "shape": [ | |
| 3, | |
| 91, | |
| 104, | |
| 149 | |
| ], | |
| "zarr_format": 2 | |
| }, | |
| "8": { | |
| "chunks": [ | |
| 1, | |
| 1, | |
| 52, | |
| 74 | |
| ], | |
| "compressor": { | |
| "blocksize": 0, | |
| "clevel": 5, | |
| "cname": "lz4", | |
| "id": "blosc", | |
| "shuffle": 1 | |
| }, | |
| "dimension_separator": "/", | |
| "dtype": "<u2", | |
| "fill_value": 0, | |
| "filters": null, | |
| "order": "C", | |
| "shape": [ | |
| 3, | |
| 91, | |
| 52, | |
| 74 | |
| ], | |
| "zarr_format": 2 | |
| } | |
| } | |
| }, | |
| "shapes": [], | |
| "lastInsetTextIndex": 64, | |
| "insetRoiId": 41526087 | |
| } | |
| ], | |
| "paper_width": 595, | |
| "paper_height": 842, | |
| "page_size": "A4", | |
| "page_count": 1, | |
| "paper_spacing": 50, | |
| "page_col_count": 1, | |
| "height_mm": 297, | |
| "width_mm": 210, | |
| "orientation": "vertical", | |
| "legend": "", | |
| "legend_collapsed": true, | |
| "page_color": "FFFFFF", | |
| "figureName": "OME-Zarr demo" | |
| } |
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment