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- gcc
Gus Dunn xguse
xguse
/ Cursor CLI System Prompt 2025-08-07
Created
August 8, 2025 12:12
— forked from gregce/Cursor CLI System Prompt 2025-08-07
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| You are an AI coding assistant, powered by GPT-5. | |
| You are an interactive CLI tool that helps users with software engineering tasks. Use the instructions below and the tools available to you to assist the user. | |
| You are pair programming with a USER to solve their coding task. | |
| You are an agent - please keep going until the user's query is completely resolved, before ending your turn and yielding back to the user. Only terminate your turn when you are sure that the problem is solved. Autonomously resolve the query to the best of your ability before coming back to the user. | |
| Your main goal is to follow the USER's instructions at each message. | |
| <communication> |
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| r-essentials | |
| r-pheatmap | |
| bioconductor-singler | |
| r-seurat | |
| r-hdf5r | |
| r-tidyverse | |
| bioconductor-scater |
xguse
/ g1kv37_vs_hg19.tsv
Last active
June 15, 2016 19:23
— forked from lindenb/FastaMD5.java
md5sums and bash pipeline for confirming chromosome validity for human_g1k_v37.fasta
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| 1b22b98cdeb4a9304cb5d48026a85128 | 1 dna:chromosome chromosome:GRCh37:1:1:249250621:1 | chr1 | |
|---|---|---|---|
| 988c28e000e84c26d552359af1ea2e1d | 10 dna:chromosome chromosome:GRCh37:10:1:135534747:1 | chr10 | |
| 98c59049a2df285c76ffb1c6db8f8b96 | 11 dna:chromosome chromosome:GRCh37:11:1:135006516:1 | chr11 | |
| 06cbf126247d89664a4faebad130fe9c | GL000202.1 dna:supercontig supercontig::GL000202.1:1:40103:1 | chr11_gl000202_random | |
| 51851ac0e1a115847ad36449b0015864 | 12 dna:chromosome chromosome:GRCh37:12:1:133851895:1 | chr12 | |
| 283f8d7892baa81b510a015719ca7b0b | 13 dna:chromosome chromosome:GRCh37:13:1:115169878:1 | chr13 | |
| 98f3cae32b2a2e9524bc19813927542e | 14 dna:chromosome chromosome:GRCh37:14:1:107349540:1 | chr14 | |
| e5645a794a8238215b2cd77acb95a078 | 15 dna:chromosome chromosome:GRCh37:15:1:102531392:1 | chr15 | |
| fc9b1a7b42b97a864f56b348b06095e6 | 16 dna:chromosome chromosome:GRCh37:16:1:90354753:1 | chr16 | |
| 351f64d4f4f9ddd45b35336ad97aa6de | 17 dna:chromosome chromosome:GRCh37:17:1:81195210:1 | chr17 |
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| # Gus | |
| def m(y=3.65E4): | |
| return y - 1 | |
| # Rei |
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| --- | |
| channels: | |
| - http://xguse.github.io/conda-package-repo/pkgs/channel/ | |
| - r | |
| - pandas | |
| - defaults | |
| - https://conda.anaconda.org/davidbgonzalez | |
| show_channel_urls: True |
xguse
/ PKGBUILD
Last active
August 29, 2015 14:24
— forked from flying-sheep/PKGBUILD
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| # Maintainer: Meow < a.li.devtty at gmail dot com > | |
| # Get download links and md5 sums for latest version of RStudio desktop | |
| cat <<_EOF_ >/dev/null | |
| ## R code ############# | |
| require(XML) | |
| page = htmlTreeParse("http://www.rstudio.com/products/rstudio/download/",useInternalNodes = T) | |
| links = sapply(getNodeSet(page,'//table[@class="downloads"]/thead/tr/th[text()="Installers"]/../../..//a[contains(@href,".deb")]'),xmlGetAttr,'href') | |
| md5sums = sapply(getNodeSet(page,'//table[@class="downloads"]/thead/tr/th[text()="Installers"]/../../..//a[contains(@href,".deb")]/../..//code'),xmlValue) | |
| print(cbind(links,md5sums)) |
xguse
/ _readme.md
Created
May 23, 2015 15:10
— forked from shime/_readme.md
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| == 2015-04-16 14:35:02,200 main INFO This is EasyBuild 2.0.0 (framework: 2.0.0, easyblocks: 2.0.0) on host jupiter. | |
| == 2015-04-16 14:35:02,201 main INFO Command line: --buildpath=/home/gus/.local/stow/eb_install_prefix/easybuild/build --configfiles=/home/gus/.config/easybuild/config.cfg --installpath=/home/gus/.local/stow/eb_install_prefix/easybuild --modules-tool=Lmod --prefix=/home/gus/.local/stow/eb_install_prefix/easybuild --repositorypath=/home/gus/.local/stow/eb_install_prefix/easybuild/ebfiles_repo --robot=/home/gus/.local/easybuild/easyconfigs --sourcepath=/home/gus/.local/stow/eb_install_prefix/easybuild/sources goolf-1.4.10-no-OFED.eb | |
| == 2015-04-16 14:35:02,201 main INFO Using /tmp/eb-7Fsezq as temporary directory | |
| == 2015-04-16 14:35:02,205 main.tools.robot INFO Using robot path(s): ['/home/gus/.local/easybuild/easyconfigs'] | |
| == 2015-04-16 14:35:02,208 main.filetools INFO Command /home/gus/.local/lmod/5.9.3/libexec/lmod found at /home/gus/.local/lmod/5.9.3/libexec/lmod | |
| == 2015-04-16 14:35:02,208 main |
xguse
/ easybuild-oeMnPd.log
Created
April 16, 2015 18:39
2015-04-16 14:36:26,482 main ERROR EasyBuild crashed with an error (at easybuild/main.py:137 in build_and_install_software): Build of /home/gus/.local/easybuild/easyconfigs/g/GCC/GCC-4.7.2.eb failed (err: 'build failed (first 300 chars): EasyBuild crashed with an error (at easybuild/tools/run.py:384 in parse_cmd_output): cmd " make -j 4 bootstra…
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| /home/gus/.local/stow/eb_install_prefix/easybuild/build/GCC/4.7.2/dummy-dum |
xguse
/ git-2.3.4-goolf-1.4.10.GUS.eb
Last active
August 29, 2015 14:17
git-2.3.4-goolf-1.4.10.GUS.eb
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| ## | |
| # This file is an EasyBuild reciPY as per https://github.com/hpcugent/easybuild | |
| # | |
| # Copyright:: Copyright 2012-2014 Uni.Lu/LCSB, NTUA | |
| # Authors:: Fotis Georgatos <[email protected]> | |
| # Authors:: Dmitri Gribenko <[email protected]> | |
| # License:: MIT/GPL | |
| # $Id$ | |
| # | |
| # This work implements a part of the HPCBIOS project and is a component of the policy: |
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