aleph-ra

#!/bin/bash

# Stop command echoing
set +x

# Propogate errors and fail on error
set -euo pipefail

# Default log level: INFO
QUIET_MODE=false

aleph-ra

from NeuroMLUtilities import ConnectionInfo
import PyOpenWorm as P

############################################################

#    A simple script to read the values in PyOpenWorm

############################################################

aleph-ra

# Model of a neuromotor circuit


# To run:
#          python c302_Motor.py A   (uses parameters_A, requires jNeuroML to run)
# or
#          python c302_Motor.py B   (uses parameters_B, requires jNeuroML built from the
#                                     experimental branches to run: 'python getNeuroML experimental'
#                                     see https://github.com/NeuroML/jNeuroML)

aleph-ra

# -*- coding: utf-8 -*-
from NeuroMLUtilities import ConnectionInfo

from xlrd import open_workbook

############################################################

#    A simple script to read the values in CElegansNeuronTables.xls.

############################################################

aleph-ra

# RUN WITH A SUBSET FROM NeuronConnect.xls, DO NOT RUN WITH COMPLETE EXCEL FILE.

import os

import sys
sys.path.append("..")
import SpreadsheetDataReader

import xlwt

aleph-ra

import os

import sys
sys.path.append("..")
import SpreadsheetDataReader

from c302 import generate
import parameters_B as params

import neuroml.loaders as loaders

aleph-ra

import os

import sys
sys.path.append("..")
import SpreadsheetDataReader

from c302 import generate
import parameters_A as params

import neuroml.loaders as loaders

aleph-ra

import os

if __name__ == '__main__':

    hub_cell = "RMGR"

    spoke_cells =["URXR","ASKR","ASJR","RMHR","AWBR","IL2R","ASHR","ADLR"]


# stimulating RMGR (hub cell) when paired with all spoke cells