kozo2

pe_name            ompi
slots              256
user_lists         NONE
xuser_lists        NONE
start_proc_args    /bin/true
stop_proc_args     /bin/true
allocation_rule    $round_robin
control_slaves     TRUE
job_is_first_task  FALSE
urgency_slots      min

kozo2

e_name            ompi256
slots              256
user_lists         NONE
xuser_lists        NONE
start_proc_args    /bin/true
stop_proc_args     /bin/true
allocation_rule    $pe_slots
control_slaves     FALSE
job_is_first_task  TRUE
urgency_slots      min

kozo2

kozo2

language: cpp
os:
- osx
compiler:
- clang
before_install:
#- brew update; brew upgrade
- gem install cocoapods; pod setup
- make

kozo2

kozo2

kozo2

kozo2

gd = list(join1 = c(ag.db="gene_id", org.At.tair.db="gene_id"))
destination <- tempfile()
dir.create(destination)
library("OrganismDbi", lib.loc="~/R/win-library/3.2")
makeOrganismPackage(pkgname = "hoge.fuga", graphData = gd, organism = "Arabidopsis thaliana", version = "1.0.0", maintainer = "Kozo Nishida<knishida@riken.jp>", author = "Some Body", destDir = destination, license = "Artistic-2.0")
Error in .testKeys(fkeys) : 
  some foreign keys are not present in their associated databases

kozo2

kozo2

import glob
from bs4 import BeautifulSoup
import bs4

htmls = glob.glob('./knapsack/C*')
output = open("knapsack.tsv", "w")
output.write("\t".join(["knapsackid", "name", "formula", "mw", "cas", "inchikey"]))
output.write("\n")

for i in htmls: