mutterer’s gists

mutterer / Data_To_Midi.groovy

Created August 25, 2022 11:59 — forked from lacan/Data_To_Midi.groovy

[Data to MIDI sound] Use results from a Results table as notes to form a melody #midi #imagej

	#@ File saveLocation (label="Location of MIDI save file")

	/**
	* Testing Spots to Sound using MIDI
	* Each hit is given a unique note based on some metric and intensity is related to volume
	*
	* = AUTHOR INFORMATION =
	* Code written by Olivier Burri, EPFL - SV - PTECH - BIOP
	* for Samuel Vernon, McCabe Lab
	* 2022.08.23

mutterer / Image_to_Tool_Icon_24.ijm

Created January 19, 2021 18:02 — forked from lannybroo/Image_to_Tool_Icon_24.ijm

A version of the ImageJ Image to Tool Icon macro that works with 24x24 images

	// This macro converts a 24x24 8-bit image to a tool macro icon
	// string. Ideally, the image should have no more than 16 colors.
	// Includes a few examples.

	macro "Convert Image to Tool Icon 24..." {
	requires("1.53c"); // for the extended hex feature
	if (bitDepth==24) // convert RGB to 16-color 8-bit
	run("8-bit Color", "number=16");
	if (bitDepth!=8 \|\| getWidth>24 \|\| getHeight>24)
	exit("This macro requires an 8-bit 24x24 image");

mutterer / straighten_animation_v1(20210115).ijm

Created January 15, 2021 15:57 — forked from ekatrukha/straighten_animation_v2(20210128).ijm

ImageJ macro for illustration of "Straighten" ROI function

	// Providing an image and polyline, macro illustrates
	// (creates a stack with animation)
	// "Straighten" ROI function of ImageJ
	// 2021.01.15 Eugene Katrukha / katpyxa at gmail dot com

	if (nImages<1)
	{
	exit("This macro needs an input image. Open something");
	}
	if(selectionType()!=6)

mutterer / curvature_radius.bsh

Created September 10, 2020 12:13 — forked from lacan/curvature_radius.bsh

Curvature radius simple calculation for ImageJ/fiji #Fiji #Beanshell #Curvature #ImageJ

	/*
	* Simple script that takes a selection and computes the curvature radius for the whole perimeter of the shape.
	*
	* By Olivier Burri,
	* BioImaging and Optics Platform, BIOP
	* Ecole Polytechnique Fédérale de Lausanne (EPFL)
	* Last update: May 2017
	*
	*
	*/

mutterer / sketch_aug31b.pde

Created February 28, 2020 20:14 — forked from spoike/sketch_aug31b.pde

Processing Sketch - Flames!

	/**
	* Flames. Generates some flames by using gradients (with basic
	* spline math) and Perlin noise (for generating the flame
	* height).
	*/

	/** Flame outer color */
	color startCol = color(100, 0, 210);
	/** Flame inner color */
	color endCol = color(200, 150, 255);

mutterer / zoom_movie_ImageJ_v2.ijm

Created March 17, 2017 13:59 — forked from ekatrukha/zoom_movie_ImageJ_v2.ijm

ImageJ macro making a movie (stack) of zooming on selected rectangle (ROI)

	//ImageJ macro making a movie (stack) of zooming on selected rectangle (ROI)
	//Eugene Katrukha katpyxa at gmail.com
	requires("1.48h");

	//check if there is rectangular selection
	if(selectionType() ==0)
	{
	sTitle=getTitle();
	sMovieTitle=sTitle+"_zoom_movie";
	setBatchMode(true);

mutterer / drawCirclesAndQuadrants.ijm

Created June 24, 2016 14:36 — forked from lacan/drawCirclesAndQuadrants.ijm

Draws fractions of concentric circles

	/*
	* By Olivier Burri, BioImaging & Optics Platform EPFL
	* June 2016
	* Provided as-is from a request on the ImageJ Forum
	* http://forum.imagej.net/t/dividing-circle-into-8-equal-areas/1995
	*/

	var count = 0; // Variable to know which circle we are working on

	// If you install this macro, it will be mapped to the F2 Key

mutterer / JACoP_Fluorogram.ijm

Created September 24, 2015 07:27

Pretty fluorogram for JACoP

	/*
	* Making a pretty fluorogram
	* Olivier Burri, BioImaging & Optics Platform, EPFL
	*/

	run("Fluorescent Cells (400K)");

	image = getTitle();
	run("Split Channels");