Reed A. Cartwright reedacartwright

This tutorial is for Minecraft Bedrock Edition worlds that have been imported to a Windows 10 copy of the game. It will work with XBox, Android, PS4, etc. worlds, but they must be first copied to a Windows installation.

Download the following two files.

Place busybox64.exe in your minecraftWorlds directory. This is located at %LOCALAPPDATA%\Packages\Microsoft.MinecraftUWP_8wekyb3d8bbwe\LocalState\games\com.mojang\minecraftWorlds.

	# I use this script to generate a Minecraft world.
	# I run a BDS instance with sim distance 12 and a
	# instance of the unofficial Linux client.
	# Using a server-client setup seems to be more stable
	# than running client only.
	#
	# Make sure your player is in creative and flying before
	# you begin.

	# Script parameters

	# update if neccessary
	devtools::install_github("reedacartwright/rbedrock")

	library(jsonlite)
	library(tidyverse)
	library(rbedrock)

	db <- bedrockdb(dbpath_goes_here)

	# read blocks in cube from 0,16,0 to 63,79,63

	# Copyright (c) 2020 Reed A. Cartwright
	#
	# Redistribution and use in source and binary forms, with or without
	# modification, are permitted provided that the following conditions are
	# met:
	#
	# Redistributions of source code must retain the above copyright
	# notice, this list of conditions and the following disclaimer.
	#
	# Redistributions in binary form must reproduce the above copyright

	library(tidyverse)
	library(rbedrock)

	# generate a list of worlds
	list_worlds()

	# use the most recent file, adjust as needed
	dbpath <- list_worlds()$folder[1]

	# open the world db

	# uncomment and reinstall rbedrock to get the latest code.
	# devtools::install_github("reedacartwright/rbedrock", INSTALL_opts="--no-multiarch")

	library(tidyverse)
	library(rbedrock)

	# Local copy of the Advanced Automation Realm
	# replace with your own world id
	dbpath <- "XBdsXqo+AAA="

	#!/usr/bin/Rscript --vanilla

	suppressPackageStartupMessages(library(stringr))
	suppressPackageStartupMessages(library(Biostrings))

	G = BString("-")

	main = function(infile, dnafile, outfile) {
	ARGS = commandArgs(trailingOnly=TRUE)
	if(missing(infile)) {

	// Compile with -std=c++14

	#include <array>
	#include <memory>
	#include <iostream>
	#include <algorithm>

	struct A {
	virtual void operator()() = 0;
	std::array<int,10> data;

	# This script calculates the average entropy and effective number of
	# possible mutants for the human mutation spectrum.

	# Preparing to run this script
	# > wget ftp://ftp.ncbi.nih.gov/snp/organisms/human_9606_b150_GRCh38p7/VCF/common_all_20170710.vcf.gz
	# > wget ftp://ftp.ncbi.nih.gov/snp/organisms/human_9606_b150_GRCh38p7/VCF/common_all_20170710.vcf.gz.tbi
	# > bcftools query -f '%REF\t%ALT\n' common_all_20170710.vcf.gz \| zstd > altref.txt.zst

	library(data.table)
	library(stringr)

	#!/usr/bin/Rscript
	# Authors: David Winter
	# Joanna Malukiewicz
	# Reed A. Cartwright

	library(HiddenMarkov)
	library(data.table) #makes reading a data table faster than using R data frame functions
	library(jsonlite)

	cat("Started at ", as.character(Sys.time()), "\n")