yueyericardo’s gists

yueyericardo / version 1.md

Last active January 8, 2019 05:14

hide_all in mac

on run {input, parameters}
	
	tell application "System Events" to set all_apps to the name of every process whose visible is true
	
	repeat with a in all_apps
		tell application "System Events" to try
			keystroke "h" using command down
			delay 0.1
 on error

yueyericardo / note.md

Last active January 19, 2019 05:26

Pytorch TF Environment

# tensorflow
conda create -n tf python=3.5 tensorflow-gpu

# pytorch
conda install pytorch torchvision -c pytorch

# .bashrc
source activate tf

yueyericardo / mode.cpp

Last active February 15, 2019 03:58

	/******************************************************************************

	Online C++ Compiler.
	Code, Compile, Run and Debug C++ program online.
	Write your code in this editor and press "Run" button to compile and execute it.

	*******************************************************************************/

	#include <iostream>

yueyericardo / load_model.py

Created February 20, 2019 17:58

	def loadmodel():
	H_model = tf.keras.models.load_model('./models/H_tf.model', custom_objects={'AniCELU':AniCELU})
	C_model = tf.keras.models.load_model('./models/C_tf.model', custom_objects={'AniCELU':AniCELU})
	N_model = tf.keras.models.load_model('./models/N_tf.model', custom_objects={'AniCELU':AniCELU})
	O_model = tf.keras.models.load_model('./models/O_tf.model', custom_objects={'AniCELU':AniCELU})

	modelist = [H_model, C_model, N_model, O_model]
	return modelist

yueyericardo / celu.ipynb

Created May 15, 2019 16:10

archieve

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yueyericardo / install_orca.sh

Last active May 27, 2019 20:26

	# 1. openmpi-2.1.5 /home/qasdfgtyuiop/program/openmpi/
	cd ~
	mkdir program
	cd program/
	wget https://download.open-mpi.org/release/open-mpi/v2.1/openmpi-2.1.5.tar.gz
	tar -zxvf openmpi-2.1.5.tar.gz
	rm openmpi-2.1.5.tar.gz
	cd openmpi-2.1.5/
	./configure --prefix="/home/qasdfgtyuiop/program/openmpi"
	make # take a while

yueyericardo / plot_contact.ipynb

Created June 7, 2019 18:23

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yueyericardo / toy_linear_regression.py

Last active June 18, 2019 14:44

Toy linear regression model (Keras)

	import tensorflow as tf
	config = tf.ConfigProto()
	config.gpu_options.allow_growth = True
	import numpy as np
	import matplotlib
	from matplotlib import pyplot as plt
	%matplotlib inline

	class linear_reg(tf.keras.Model):
	def __init__(self):

yueyericardo / matplot_sub.py

Created June 18, 2019 14:46

	plt.figure(figsize=(15,8))

	plt.subplot(4, 1, 1)
	plt.plot(OH.iloc[:,0],OH.iloc[:,1])
	plt.ylim(0, 3.5e-18)
	plt.xlim(3580, 3900)
	plt.title('R branch', fontsize=16, pad=-20)

	plt.subplot(4, 1, 2)
	plt.plot(OH.iloc[:,0],OH.iloc[:,1])

yueyericardo / keras_progress_bar.py

Last active June 26, 2019 13:02

	class Progbar(object):
	"""Displays a progress bar.
	Arguments:
	target: Total number of steps expected, None if unknown.
	width: Progress bar width on screen.
	verbose: Verbosity mode, 0 (silent), 1 (verbose), 2 (semi-verbose)
	stateful_metrics: Iterable of string names of metrics that
	should not be averaged over time. Metrics in this list
	will be displayed as-is. All others will be averaged
	by the progbar before display.

Jinze Xue yueyericardo